RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 YBX3P16989 372 aaKnown RBP eCLIP22.47■■□□□ 1.197e-8■□□□□ 8.2
RPL28-205ENST00000558131 GPR162Q16538 588 aa22.47■■□□□ 1.19
RPL28-205ENST00000558131 FLAD1Q8NFF5 587 aa22.47■■□□□ 1.19
RPL28-205ENST00000558131 AK7Q96M32 723 aa22.47■■□□□ 1.19
RPL28-205ENST00000558131 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
RPL28-205ENST00000558131 SLC4A9Q96Q91 983 aa22.46■■□□□ 1.19
RPL28-205ENST00000558131 ADAMTS7Q9UKP4 1686 aa22.46■■□□□ 1.19
RPL28-205ENST00000558131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.45■■□□□ 1.18
RPL28-205ENST00000558131 KIF7Q2M1P5 1343 aa22.45■■□□□ 1.18
RPL28-205ENST00000558131 PHF14O94880 888 aa22.44■■□□□ 1.18
RPL28-205ENST00000558131 SSFA2P28290 1259 aa22.44■■□□□ 1.18
RPL28-205ENST00000558131 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
RPL28-205ENST00000558131 HMGB2P26583 209 aaKnown RBP22.43■■□□□ 1.18
RPL28-205ENST00000558131 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
RPL28-205ENST00000558131 ERVV-2B6SEH9 535 aa22.41■■□□□ 1.18
RPL28-205ENST00000558131 ATP6V1AP38606 617 aa22.41■■□□□ 1.18
RPL28-205ENST00000558131 DCAF5Q96JK2 942 aa22.41■■□□□ 1.18
RPL28-205ENST00000558131 CD2APQ9Y5K6 639 aa22.41■■□□□ 1.18
RPL28-205ENST00000558131 MRC1P22897 1456 aa22.41■■□□□ 1.18
RPL28-205ENST00000558131 IL13P35225 146 aa22.4■■□□□ 1.18
RPL28-205ENST00000558131 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
RPL28-205ENST00000558131 BRCA1P38398 1863 aaKnown RBP22.4■■□□□ 1.18
RPL28-205ENST00000558131 GNPATO15228 680 aa22.39■■□□□ 1.17
RPL28-205ENST00000558131 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.17
RPL28-205ENST00000558131 ZNF530Q6P9A1 599 aaPredicted RBP22.38■■□□□ 1.17
RPL28-205ENST00000558131 COL3A1P02461 1466 aaPredicted RBP22.37■■□□□ 1.17
RPL28-205ENST00000558131 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
RPL28-205ENST00000558131 KNSTRNQ9Y448 316 aa22.37■■□□□ 1.17
RPL28-205ENST00000558131 UBR2Q8IWV8 1755 aa22.36■■□□□ 1.17
RPL28-205ENST00000558131 PER1O15534 1290 aaPredicted RBP22.36■■□□□ 1.17
RPL28-205ENST00000558131 HSP90AB1P08238 724 aaKnown RBP22.36■■□□□ 1.17
RPL28-205ENST00000558131 AMOTQ4VCS5 1084 aa22.36■■□□□ 1.17
RPL28-205ENST00000558131 SULT6B1Q6IMI4 303 aa22.36■■□□□ 1.17
RPL28-205ENST00000558131 CNTNAP4Q9C0A0 1308 aa22.34■■□□□ 1.17
RPL28-205ENST00000558131 ADCY9O60503 1353 aa22.34■■□□□ 1.17
RPL28-205ENST00000558131 PXDNLA1KZ92 1463 aa22.34■■□□□ 1.17
RPL28-205ENST00000558131 GRIN3BO60391 1043 aa22.33■■□□□ 1.17
RPL28-205ENST00000558131 C10orf71Q711Q0 1435 aa22.32■■□□□ 1.16
RPL28-205ENST00000558131 KCPQ6ZWJ8 1503 aa22.32■■□□□ 1.16
RPL28-205ENST00000558131 SIPA1L3O60292 1781 aaPredicted RBP22.32■■□□□ 1.16
RPL28-205ENST00000558131 RC3H1Q5TC82 1133 aaKnown RBP22.31■■□□□ 1.16
RPL28-205ENST00000558131 RBM42Q9BTD8 480 aaKnown RBP22.31■■□□□ 1.16
RPL28-205ENST00000558131 MTHFSP49914 203 aa22.3■■□□□ 1.16
RPL28-205ENST00000558131 CABP4P57796 275 aa22.3■■□□□ 1.16
RPL28-205ENST00000558131 CEP350Q5VT06 3117 aa22.3■■□□□ 1.16
RPL28-205ENST00000558131 RTCBQ9Y3I0 505 aaKnown RBP22.29■■□□□ 1.16
RPL28-205ENST00000558131 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
RPL28-205ENST00000558131 MMP10P09238 476 aa22.28■■□□□ 1.16
RPL28-205ENST00000558131 C1QTNF8P60827 252 aa22.28■■□□□ 1.16
RPL28-205ENST00000558131 C1orf141Q5JVX7 400 aa22.28■■□□□ 1.16
RPL28-205ENST00000558131 NFATC2IPQ8NCF5 419 aa22.28■■□□□ 1.16
RPL28-205ENST00000558131 ARHGEF1Q92888 912 aaKnown RBP22.28■■□□□ 1.16
RPL28-205ENST00000558131 GYS1P13807 737 aa22.27■■□□□ 1.16
RPL28-205ENST00000558131 ADRA2BP18089 450 aa22.27■■□□□ 1.16
RPL28-205ENST00000558131 ARFGEF1Q9Y6D6 1849 aa22.27■■□□□ 1.15
RPL28-205ENST00000558131 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
RPL28-205ENST00000558131 RPS6KA4O75676 772 aa22.26■■□□□ 1.15
RPL28-205ENST00000558131 TRAPPC3LQ5T215 181 aa22.26■■□□□ 1.15
RPL28-205ENST00000558131 WWC3Q9ULE0 1092 aa22.26■■□□□ 1.15
RPL28-205ENST00000558131 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
RPL28-205ENST00000558131 AKAP4Q5JQC9 854 aa22.25■■□□□ 1.15
RPL28-205ENST00000558131 HMOX1P09601 288 aa22.24■■□□□ 1.15
RPL28-205ENST00000558131 LGR6Q9HBX8 967 aa22.24■■□□□ 1.15
RPL28-205ENST00000558131 NRXN2Q9P2S2 1712 aa22.23■■□□□ 1.15
RPL28-205ENST00000558131 AFDNP55196 1824 aaKnown RBP22.23■■□□□ 1.15
RPL28-205ENST00000558131 CRKLP46109 303 aaKnown RBP22.23■■□□□ 1.15
RPL28-205ENST00000558131 CC2D1BQ5T0F9 858 aaKnown RBP22.23■■□□□ 1.15
RPL28-205ENST00000558131 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
RPL28-205ENST00000558131 SLC52A2Q9HAB3 445 aa22.22■■□□□ 1.15
RPL28-205ENST00000558131 NLGN1Q8N2Q7 840 aa22.21■■□□□ 1.15
RPL28-205ENST00000558131 DLEC1Q9Y238 1755 aa22.2■■□□□ 1.14
RPL28-205ENST00000558131 RNMTO43148 476 aaKnown RBP22.2■■□□□ 1.14
RPL28-205ENST00000558131 MTHFSDQ2M296 383 aaKnown RBP22.2■■□□□ 1.14
RPL28-205ENST00000558131 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
RPL28-205ENST00000558131 USP42Q9H9J4 1324 aaKnown RBP22.2■■□□□ 1.14
RPL28-205ENST00000558131 DIAPH1O60610 1272 aaKnown RBP22.19■■□□□ 1.14
RPL28-205ENST00000558131 SRP68Q9UHB9 627 aaKnown RBP22.19■■□□□ 1.14
RPL28-205ENST00000558131 SCN7AQ01118 1682 aa22.18■■□□□ 1.14
RPL28-205ENST00000558131 RFC4P35249 363 aa22.18■■□□□ 1.14
RPL28-205ENST00000558131 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
RPL28-205ENST00000558131 TGFB2P61812 414 aa22.17■■□□□ 1.14
RPL28-205ENST00000558131 DNAJC10Q8IXB1 793 aa22.17■■□□□ 1.14
RPL28-205ENST00000558131 SOS1Q07889 1333 aaPredicted RBP22.16■■□□□ 1.14
RPL28-205ENST00000558131 DDR1Q08345 913 aa22.16■■□□□ 1.14
RPL28-205ENST00000558131 SLC39A6Q13433 755 aa22.16■■□□□ 1.14
RPL28-205ENST00000558131 FKBP8Q14318 412 aa22.16■■□□□ 1.14
RPL28-205ENST00000558131 KCNA3P22001 575 aa22.15■■□□□ 1.14
RPL28-205ENST00000558131 A0A0G2JLW4 131 aa22.14■■□□□ 1.13
RPL28-205ENST00000558131 CYP19A1P11511 503 aaPredicted RBP22.14■■□□□ 1.13
RPL28-205ENST00000558131 DPEP1P16444 411 aa22.13■■□□□ 1.13
RPL28-205ENST00000558131 CCDC87Q9NVE4 849 aa22.13■■□□□ 1.13
RPL28-205ENST00000558131 COL15A1P39059 1388 aa22.12■■□□□ 1.13
RPL28-205ENST00000558131 PARP3Q9Y6F1 533 aa22.12■■□□□ 1.13
RPL28-205ENST00000558131 SBF1O95248 1867 aa22.11■■□□□ 1.13
RPL28-205ENST00000558131 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
RPL28-205ENST00000558131 BCORQ6W2J9 1755 aa22.11■■□□□ 1.13
RPL28-205ENST00000558131 ANKRD31Q8N7Z5 1873 aa22.11■■□□□ 1.13
RPL28-205ENST00000558131 POLRMTO00411 1230 aaKnown RBP22.1■■□□□ 1.13
RPL28-205ENST00000558131 TM4SF1P30408 202 aa22.1■■□□□ 1.13
RPL28-205ENST00000558131 GPBP1L1Q9HC44 474 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms