RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 STAG1Q8WVM7 1258 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 SGSM2O43147 1006 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 ECEL1O95672 775 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 MBD3O95983 291 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 POLD1P28340 1107 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 KAT2BQ92831 832 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 KCNV1Q6PIU1 500 aa13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 DNAAF4Q8WXU2 420 aa13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 SETDB1Q15047 1291 aa13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 EXOC4Q96A65 974 aa13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 GNL3LQ9NVN8 582 aaKnown RBP13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
SEMA4B-204ENST00000558065 EME2A4GXA9 379 aaPredicted RBP13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 IVLP07476 585 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 CHMLP26374 656 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 CPLX2Q6PUV4 134 aaKnown RBP13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 PDRG1Q9NUG6 133 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 ANKRD45Q5TZF3 282 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 LRRC31Q6UY01 552 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 ELF1P32519 619 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
SEMA4B-204ENST00000558065 USP47Q96K76 1375 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 MNAT1P51948 309 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 EFCAB13Q8IY85 973 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 CCDC97Q96F63 343 aaPredicted RBP13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 ARMC3Q5W041 872 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 PANK1Q8TE04 598 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 NKTRP30414 1462 aaKnown RBP13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 ANKRD65E5RJM6 399 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
SEMA4B-204ENST00000558065 ABCD1P33897 745 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 SLFN5Q08AF3 891 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 TRAF1Q13077 416 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 PSMD2Q13200 908 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 RNF20Q5VTR2 975 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 CEP135Q66GS9 1140 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 AK7Q96M32 723 aa13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 RPRD2Q5VT52 1461 aaKnown RBP13.02□□□□□ -0.32
SEMA4B-204ENST00000558065 WWC2Q6AWC2 1192 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 AP1G2O75843 785 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 PTGS1P23219 599 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 HNRNPH1P31943 449 aaKnown RBP13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 LMAN1P49257 510 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 FMNL3Q8IVF7 1028 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 ADAM21Q9UKJ8 722 aa13.02□□□□□ -0.33
SEMA4B-204ENST00000558065 RTN2O75298 545 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 RPS6KA3P51812 740 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 SH3GL3Q99963 347 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 MAF1Q9H063 256 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.333e-9■■■■■ 69.6
SEMA4B-204ENST00000558065 MCM8Q9UJA3 840 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 CD151P48509 253 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 SLC5A9Q2M3M2 681 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 RWDD2BP57060 319 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 SPC24Q8NBT2 197 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
SEMA4B-204ENST00000558065 PPFIA2O75334 1257 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
SEMA4B-204ENST00000558065 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 LRMPQ12912 555 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 SLX1AQ9BQ83 275 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
SEMA4B-204ENST00000558065 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 SASH3O75995 380 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 GIMAP7Q8NHV1 300 aa13□□□□□ -0.33
SEMA4B-204ENST00000558065 SUDS3Q9H7L9 328 aaPredicted RBP13□□□□□ -0.33
SEMA4B-204ENST00000558065 CPSF2Q9P2I0 782 aaKnown RBP13□□□□□ -0.33
SEMA4B-204ENST00000558065 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 SLU7O95391 586 aaKnown RBP12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 ERCC6LQ2NKX8 1250 aa12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 PLXNC1O60486 1568 aa12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
SEMA4B-204ENST00000558065 KIF2AO00139 706 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms