RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 BABAM1Q9NWV8 329 aa27.59■■■□□ 2.01
TMEM250-204ENST00000557985 SHANK3Q9BYB0 1731 aa27.59■■■□□ 2.01
TMEM250-204ENST00000557985 SLC52A2Q9HAB3 445 aa27.59■■■□□ 2.01
TMEM250-204ENST00000557985 SMC4Q9NTJ3 1288 aa27.59■■■□□ 2.01
TMEM250-204ENST00000557985 C20orf194Q5TEA3 1177 aa27.58■■■□□ 2.01
TMEM250-204ENST00000557985 AFF2P51816 1311 aa27.57■■■□□ 2
TMEM250-204ENST00000557985 ADAMTS7Q9UKP4 1686 aa27.57■■■□□ 2
TMEM250-204ENST00000557985 NKX1-1Q15270 411 aaPredicted RBP27.56■■■□□ 2
TMEM250-204ENST00000557985 FAM98CQ17RN3 349 aaKnown RBP27.56■■■□□ 2
TMEM250-204ENST00000557985 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.56■■■□□ 2
TMEM250-204ENST00000557985 CABP4P57796 275 aa27.55■■■□□ 2
TMEM250-204ENST00000557985 SLC39A6Q13433 755 aa27.55■■■□□ 2
TMEM250-204ENST00000557985 CDCA7Q9BWT1 371 aaPredicted RBP27.55■■■□□ 2
TMEM250-204ENST00000557985 CANXP27824 592 aaKnown RBP27.54■■■□□ 2
TMEM250-204ENST00000557985 BARGINQ6ZT62 677 aa27.54■■■□□ 2
TMEM250-204ENST00000557985 KAT6BQ8WYB5 2073 aa27.54■■■□□ 2
TMEM250-204ENST00000557985 DDB1Q16531 1140 aa27.53■■■□□ 2
TMEM250-204ENST00000557985 WNK3Q9BYP7 1800 aa27.53■■■□□ 2
TMEM250-204ENST00000557985 EIF4A1P60842 406 aaKnown RBP27.53■■■□□ 2
TMEM250-204ENST00000557985 SIPA1L3O60292 1781 aaPredicted RBP27.53■■■□□ 2
TMEM250-204ENST00000557985 ALDH1L2Q3SY69 923 aa27.52■■■□□ 2
TMEM250-204ENST00000557985 ZNF428Q96B54 188 aa27.52■■■□□ 2
TMEM250-204ENST00000557985 NECTIN2Q92692 538 aa27.5■■□□□ 1.99
TMEM250-204ENST00000557985 NOB1Q9ULX3 412 aaKnown RBP27.5■■□□□ 1.99
TMEM250-204ENST00000557985 TNNQ9UQP3 1299 aa27.5■■□□□ 1.99
TMEM250-204ENST00000557985 KDM3BQ7LBC6 1761 aa27.5■■□□□ 1.99
TMEM250-204ENST00000557985 ERVV-2B6SEH9 535 aa27.49■■□□□ 1.99
TMEM250-204ENST00000557985 MRPL50Q8N5N7 158 aaKnown RBP27.49■■□□□ 1.99
TMEM250-204ENST00000557985 ZNF790Q6PG37 636 aa27.48■■□□□ 1.99
TMEM250-204ENST00000557985 EXOC6Q8TAG9 804 aa27.48■■□□□ 1.99
TMEM250-204ENST00000557985 A0A0G2JS52 829 aa27.48■■□□□ 1.99
TMEM250-204ENST00000557985 CLUAP1Q96AJ1 413 aa27.47■■□□□ 1.99
TMEM250-204ENST00000557985 CRBNQ96SW2 442 aa27.47■■□□□ 1.99
TMEM250-204ENST00000557985 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
TMEM250-204ENST00000557985 MARCH10Q8NA82 808 aaPredicted RBP27.46■■□□□ 1.99
TMEM250-204ENST00000557985 PANK1Q8TE04 598 aa27.46■■□□□ 1.99
TMEM250-204ENST00000557985 TNS2Q63HR2 1409 aa27.45■■□□□ 1.99
TMEM250-204ENST00000557985 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.45■■□□□ 1.99
TMEM250-204ENST00000557985 ZKSCAN2Q63HK3 967 aa27.45■■□□□ 1.98
TMEM250-204ENST00000557985 QTRT2Q9H974 415 aaKnown RBP27.44■■□□□ 1.98
TMEM250-204ENST00000557985 MRC1P22897 1456 aa27.44■■□□□ 1.98
TMEM250-204ENST00000557985 PRAMEF22A3QJZ6 481 aa27.44■■□□□ 1.98
TMEM250-204ENST00000557985 EIF2S2P20042 333 aaKnown RBP27.44■■□□□ 1.98
TMEM250-204ENST00000557985 FBXO41Q8TF61 875 aa27.44■■□□□ 1.98
TMEM250-204ENST00000557985 TRPC5Q9UL62 973 aaPredicted RBP27.44■■□□□ 1.98
TMEM250-204ENST00000557985 SLC4A2P04920 1241 aa27.43■■□□□ 1.98
TMEM250-204ENST00000557985 TTC5Q8N0Z6 440 aa27.42■■□□□ 1.98
TMEM250-204ENST00000557985 TOGARAM1Q9Y4F4 1720 aa27.42■■□□□ 1.98
TMEM250-204ENST00000557985 RLBP1P12271 317 aa27.42■■□□□ 1.98
TMEM250-204ENST00000557985 BRPF1P55201 1214 aaPredicted RBP27.42■■□□□ 1.98
TMEM250-204ENST00000557985 ZNF496Q96IT1 587 aaPredicted RBP27.42■■□□□ 1.98
TMEM250-204ENST00000557985 TMOD3Q9NYL9 352 aa27.42■■□□□ 1.98
TMEM250-204ENST00000557985 GIGYF1O75420 1035 aaPredicted RBP27.41■■□□□ 1.98
TMEM250-204ENST00000557985 SYTL4Q96C24 671 aaPredicted RBP27.41■■□□□ 1.98
TMEM250-204ENST00000557985 TRIM27P14373 513 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 PDE3AQ14432 1141 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 ERICH6BQ5W0A0 696 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 PIGBQ92521 554 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 KIF16BQ96L93 1317 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 IPO8O15397 1037 aaKnown RBP27.4■■□□□ 1.98
TMEM250-204ENST00000557985 HDGFL1Q5TGJ6 251 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 CCDC30Q5VVM6 783 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 ATF7IPQ6VMQ6 1270 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 TSHZ2Q9NRE2 1034 aa27.4■■□□□ 1.98
TMEM250-204ENST00000557985 COG6Q9Y2V7 657 aa27.39■■□□□ 1.98
TMEM250-204ENST00000557985 PRIM1P49642 420 aaKnown RBP27.39■■□□□ 1.97
TMEM250-204ENST00000557985 ATRNO75882 1429 aa27.38■■□□□ 1.97
TMEM250-204ENST00000557985 HEG1Q9ULI3 1381 aa27.38■■□□□ 1.97
TMEM250-204ENST00000557985 GLI3P10071 1580 aa27.38■■□□□ 1.97
TMEM250-204ENST00000557985 ACSBG1Q96GR2 724 aa27.38■■□□□ 1.97
TMEM250-204ENST00000557985 DZIP1LQ8IYY4 767 aaKnown RBP27.37■■□□□ 1.97
TMEM250-204ENST00000557985 STK31Q9BXU1 1019 aa27.37■■□□□ 1.97
TMEM250-204ENST00000557985 ITGB4P16144 1822 aa27.37■■□□□ 1.97
TMEM250-204ENST00000557985 SOS1Q07889 1333 aaPredicted RBP27.37■■□□□ 1.97
TMEM250-204ENST00000557985 G2E3Q7L622 706 aa27.37■■□□□ 1.97
TMEM250-204ENST00000557985 FTSJ3Q8IY81 847 aaKnown RBP27.36■■□□□ 1.97
TMEM250-204ENST00000557985 PPP4R2Q9NY27 417 aa27.36■■□□□ 1.97
TMEM250-204ENST00000557985 ASAP1Q9ULH1 1129 aa27.36■■□□□ 1.97
TMEM250-204ENST00000557985 PTCD1O75127 700 aaKnown RBP27.35■■□□□ 1.97
TMEM250-204ENST00000557985 HOXB7P09629 217 aa27.35■■□□□ 1.97
TMEM250-204ENST00000557985 FMNL2Q96PY5 1086 aa27.35■■□□□ 1.97
TMEM250-204ENST00000557985 FAM182BQ5T319 152 aa27.33■■□□□ 1.97
TMEM250-204ENST00000557985 ARHGAP45Q92619 1136 aa27.33■■□□□ 1.97
TMEM250-204ENST00000557985 CHPF2Q9P2E5 772 aa27.33■■□□□ 1.97
TMEM250-204ENST00000557985 USP16Q9Y5T5 823 aa27.32■■□□□ 1.96
TMEM250-204ENST00000557985 ONECUT3O60422 494 aaPredicted RBP27.31■■□□□ 1.96
TMEM250-204ENST00000557985 ANXA1P04083 346 aa27.31■■□□□ 1.96
TMEM250-204ENST00000557985 SNRPA1P09661 255 aaKnown RBP27.31■■□□□ 1.96
TMEM250-204ENST00000557985 B4GALNT3Q6L9W6 998 aa27.31■■□□□ 1.96
TMEM250-204ENST00000557985 SEPT12Q8IYM1 358 aa27.31■■□□□ 1.96
TMEM250-204ENST00000557985 ATG3Q9NT62 314 aa27.31■■□□□ 1.96
TMEM250-204ENST00000557985 MS4A1P11836 297 aa27.3■■□□□ 1.96
TMEM250-204ENST00000557985 DOT1LQ8TEK3 1739 aa27.3■■□□□ 1.96
TMEM250-204ENST00000557985 BCL9O00512 1426 aa27.3■■□□□ 1.96
TMEM250-204ENST00000557985 TMEM57Q8N5G2 664 aa27.29■■□□□ 1.96
TMEM250-204ENST00000557985 PHAXQ9H814 394 aaKnown RBP27.29■■□□□ 1.96
TMEM250-204ENST00000557985 KCNQ2O43526 872 aa27.29■■□□□ 1.96
TMEM250-204ENST00000557985 THSD7AQ9UPZ6 1657 aa27.28■■□□□ 1.96
TMEM250-204ENST00000557985 C5P01031 1676 aa27.28■■□□□ 1.96
TMEM250-204ENST00000557985 API5Q9BZZ5 524 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms