RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 C5P01031 1676 aa8.59□□□□□ -1.03
TRPM1-204ENST00000557948 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
TRPM1-204ENST00000557948 CPSF1Q10570 1443 aaKnown RBP8.58□□□□□ -1.04
TRPM1-204ENST00000557948 FCHSD2O94868 740 aa8.58□□□□□ -1.04
TRPM1-204ENST00000557948 HSPA8P11142 646 aaKnown RBP8.58□□□□□ -1.04
TRPM1-204ENST00000557948 VEGFAP15692 232 aaPredicted RBP8.58□□□□□ -1.04
TRPM1-204ENST00000557948 PPARGC1BQ86YN6 1023 aaKnown RBP8.58□□□□□ -1.04
TRPM1-204ENST00000557948 KIF13BQ9NQT8 1826 aa8.58□□□□□ -1.04
TRPM1-204ENST00000557948 CNTNAP1P78357 1384 aa8.58□□□□□ -1.04
TRPM1-204ENST00000557948 ARFGEF1Q9Y6D6 1849 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 IL2RBP14784 551 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 NLRP6P59044 892 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 PRPF38BQ5VTL8 546 aaKnown RBP8.57□□□□□ -1.04
TRPM1-204ENST00000557948 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 SLIT3O75094 1523 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 SBF1O95248 1867 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 KIAA1551Q9HCM1 1747 aa8.57□□□□□ -1.04
TRPM1-204ENST00000557948 VIRMAQ69YN4 1812 aaKnown RBP8.57□□□□□ -1.04
TRPM1-204ENST00000557948 QRICH2Q9H0J4 1663 aa8.56□□□□□ -1.04
TRPM1-204ENST00000557948 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
TRPM1-204ENST00000557948 A0A0G2JLW4 131 aa8.56□□□□□ -1.04
TRPM1-204ENST00000557948 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
TRPM1-204ENST00000557948 HMGB2P26583 209 aaKnown RBP8.56□□□□□ -1.04
TRPM1-204ENST00000557948 TGFB2P61812 414 aa8.56□□□□□ -1.04
TRPM1-204ENST00000557948 CCDC61Q9Y6R9 512 aa8.56□□□□□ -1.04
TRPM1-204ENST00000557948 DOT1LQ8TEK3 1739 aa8.56□□□□□ -1.04
TRPM1-204ENST00000557948 TAF1LQ8IZX4 1826 aa8.55□□□□□ -1.04
TRPM1-204ENST00000557948 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
TRPM1-204ENST00000557948 PRIM1P49642 420 aaKnown RBP8.55□□□□□ -1.04
TRPM1-204ENST00000557948 VEGFBP49765 207 aa8.55□□□□□ -1.04
TRPM1-204ENST00000557948 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
TRPM1-204ENST00000557948 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
TRPM1-204ENST00000557948 USP47Q96K76 1375 aa8.54□□□□□ -1.04
TRPM1-204ENST00000557948 ARHGEF25Q86VW2 580 aa8.54□□□□□ -1.04
TRPM1-204ENST00000557948 CDK19Q9BWU1 502 aa8.54□□□□□ -1.04
TRPM1-204ENST00000557948 NLRP2Q9NX02 1062 aa8.54□□□□□ -1.04
TRPM1-204ENST00000557948 PHF14O94880 888 aa8.53□□□□□ -1.04
TRPM1-204ENST00000557948 MAP2K1Q02750 393 aaPredicted RBP8.53□□□□□ -1.04
TRPM1-204ENST00000557948 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
TRPM1-204ENST00000557948 AK7Q96M32 723 aa8.53□□□□□ -1.04
TRPM1-204ENST00000557948 PCDHB8Q9UN66 801 aa8.53□□□□□ -1.04
TRPM1-204ENST00000557948 PCDHB13Q9Y5F0 798 aa8.53□□□□□ -1.04
TRPM1-204ENST00000557948 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
TRPM1-204ENST00000557948 ADGRB1O14514 1584 aa8.52□□□□□ -1.04
TRPM1-204ENST00000557948 UBR3Q6ZT12 1888 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 GLTPD2A6NH11 291 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 SOX12O15370 315 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 DPEP1P16444 411 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 ERBB3P21860 1342 aa8.52□□□□□ -1.05
TRPM1-204ENST00000557948 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
TRPM1-204ENST00000557948 NSD2O96028 1365 aa8.51□□□□□ -1.05
TRPM1-204ENST00000557948 MMP10P09238 476 aa8.51□□□□□ -1.05
TRPM1-204ENST00000557948 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRPM1-204ENST00000557948 TOGARAM1Q9Y4F4 1720 aa8.51□□□□□ -1.05
TRPM1-204ENST00000557948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.5□□□□□ -1.05
TRPM1-204ENST00000557948 TRIM26Q12899 539 aaPredicted RBP8.5□□□□□ -1.05
TRPM1-204ENST00000557948 ZNF467Q7Z7K2 595 aaPredicted RBP8.5□□□□□ -1.05
TRPM1-204ENST00000557948 GCC1Q96CN9 775 aa8.5□□□□□ -1.05
TRPM1-204ENST00000557948 BEGAINQ9BUH8 593 aa8.5□□□□□ -1.05
TRPM1-204ENST00000557948 DALRD3Q5D0E6 543 aaKnown RBP8.49□□□□□ -1.05
TRPM1-204ENST00000557948 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
TRPM1-204ENST00000557948 MCOLN1Q9GZU1 580 aa8.49□□□□□ -1.05
TRPM1-204ENST00000557948 PIM2Q9P1W9 311 aa8.49□□□□□ -1.05
TRPM1-204ENST00000557948 CCDC88AQ3V6T2 1871 aa8.49□□□□□ -1.05
TRPM1-204ENST00000557948 TIAM2Q8IVF5 1701 aa8.49□□□□□ -1.05
TRPM1-204ENST00000557948 TMEM88BA6NKF7 163 aa8.48□□□□□ -1.05
TRPM1-204ENST00000557948 SSFA2P28290 1259 aa8.48□□□□□ -1.05
TRPM1-204ENST00000557948 AMIGO3Q86WK7 504 aa8.48□□□□□ -1.05
TRPM1-204ENST00000557948 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
TRPM1-204ENST00000557948 DLL1O00548 723 aa8.47□□□□□ -1.05
TRPM1-204ENST00000557948 CASP8AP2Q9UKL3 1982 aa8.47□□□□□ -1.05
TRPM1-204ENST00000557948 POTECB2RU33 542 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 LMNB1P20700 586 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 KCNA3P22001 575 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 PDAP1Q13442 181 aaKnown RBP8.46□□□□□ -1.06
TRPM1-204ENST00000557948 NBR1Q14596 966 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 DEFB115Q30KQ5 88 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 WDR33Q9C0J8 1336 aaKnown RBP8.46□□□□□ -1.06
TRPM1-204ENST00000557948 PALLDQ8WX93 1383 aa8.46□□□□□ -1.06
TRPM1-204ENST00000557948 NFAT5O94916 1531 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 CENPBP07199 599 aaPredicted RBP8.45□□□□□ -1.06
TRPM1-204ENST00000557948 SOX10P56693 466 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 SRPK2P78362 688 aaKnown RBP8.45□□□□□ -1.06
TRPM1-204ENST00000557948 RASSF7Q02833 373 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 DGKZQ13574 1117 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 PIP4P2Q8N4L2 257 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 LTN1O94822 1766 aa8.45□□□□□ -1.06
TRPM1-204ENST00000557948 KDM6AO15550 1401 aaPredicted RBP8.45□□□□□ -1.06
TRPM1-204ENST00000557948 C4AP0C0L4 1744 aa8.44□□□□□ -1.06
TRPM1-204ENST00000557948 RASSF10A6NK89 507 aa8.44□□□□□ -1.06
TRPM1-204ENST00000557948 PSEN1P49768 467 aa8.44□□□□□ -1.06
TRPM1-204ENST00000557948 CHRDL2Q6WN34 429 aa8.44□□□□□ -1.06
TRPM1-204ENST00000557948 ANKRD24Q8TF21 1146 aa8.44□□□□□ -1.06
TRPM1-204ENST00000557948 RYDENQ9NUL5 291 aaKnown RBP8.44□□□□□ -1.06
TRPM1-204ENST00000557948 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms