RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GAS2L2Q8NHY3 880 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 DHX38Q92620 1227 aaKnown RBP5.51□□□□□ -1.53
TDP1-217ENST00000557782 FAM161BQ96MY7 647 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 PCDH10Q9P2E7 1040 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 CDV3Q9UKY7 258 aaKnown RBP5.51□□□□□ -1.53
TDP1-217ENST00000557782 BACH1O14867 736 aa5.5□□□□□ -1.53
TDP1-217ENST00000557782 DNAJA1P31689 397 aaKnown RBP5.5□□□□□ -1.53
TDP1-217ENST00000557782 SOGA3Q5TF21 947 aa5.5□□□□□ -1.53
TDP1-217ENST00000557782 ALG1LQ6GMV1 187 aa5.5□□□□□ -1.53
TDP1-217ENST00000557782 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
TDP1-217ENST00000557782 SCG3Q8WXD2 468 aaKnown RBP5.5□□□□□ -1.53
TDP1-217ENST00000557782 ALKBH8Q96BT7 664 aaKnown RBP5.5□□□□□ -1.53
TDP1-217ENST00000557782 SPSB2Q99619 263 aa5.5□□□□□ -1.53
TDP1-217ENST00000557782 ESF1Q9H501 851 aaKnown RBP5.5□□□□□ -1.53
TDP1-217ENST00000557782 ZNF358Q9NW07 568 aa5.5□□□□□ -1.53
TDP1-217ENST00000557782 IQSEC3Q9UPP2 1182 aaPredicted RBP5.5□□□□□ -1.53
TDP1-217ENST00000557782 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.5□□□□□ -1.53
TDP1-217ENST00000557782 TTBK1Q5TCY1 1321 aaPredicted RBP5.49□□□□□ -1.53
TDP1-217ENST00000557782 TLDC2A0PJX2 215 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 ESPNB1AK53 854 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 BHMG1C9JSJ3 638 aaPredicted RBP5.49□□□□□ -1.53
TDP1-217ENST00000557782 EIF1AXP47813 144 aaKnown RBP5.49□□□□□ -1.53
TDP1-217ENST00000557782 MAMSTRQ6ZN01 415 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 CCDC24Q8N4L8 307 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 ABTB2Q8N961 1025 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 FAM129BQ96TA1 746 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 GMLQ99445 158 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 ACBD3Q9H3P7 528 aa5.49□□□□□ -1.53
TDP1-217ENST00000557782 CWC22Q9HCG8 908 aaKnown RBP5.49□□□□□ -1.53
TDP1-217ENST00000557782 ATAD2Q6PL18 1390 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 APLP1P51693 650 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 ARID5AQ03989 594 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 CCDC144BQ3MJ40 725 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 FAM160A2Q8N612 972 aaPredicted RBP5.48□□□□□ -1.53
TDP1-217ENST00000557782 ANKK1Q8NFD2 765 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 PMFBP1Q8TBY8 1022 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 TRIM52Q96A61 297 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 CYLDQ9NQC7 956 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 CCDC87Q9NVE4 849 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 STIM2Q9P246 746 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 HPS5Q9UPZ3 1129 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 AXIN2Q9Y2T1 843 aa5.48□□□□□ -1.53
TDP1-217ENST00000557782 GPR182O15218 404 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 FZD6O60353 706 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 SDE2Q6IQ49 451 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 POTEEQ6S8J3 1075 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 VPS37DQ86XT2 251 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 CHMP7Q8WUX9 453 aaPredicted RBP5.47□□□□□ -1.53
TDP1-217ENST00000557782 PRDM9Q9NQV7 894 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 WWC3Q9ULE0 1092 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 INPP5FQ9Y2H2 1132 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 ERBB3P21860 1342 aa5.47□□□□□ -1.53
TDP1-217ENST00000557782 PNMA6FA0A0J9YX94 578 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 TMEM229AB2RXF0 380 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 TK2O00142 265 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 GNA15P30679 374 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 ENOX2Q16206 610 aaKnown RBP5.46□□□□□ -1.54
TDP1-217ENST00000557782 ZNF662Q6ZS27 426 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 ZNF654Q8IZM8 581 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 FBF1Q8TES7 1133 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 CRELD1Q96HD1 420 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 FRMD6Q96NE9 622 aa5.46□□□□□ -1.54
TDP1-217ENST00000557782 TSR3Q9UJK0 312 aaKnown RBP5.46□□□□□ -1.54
TDP1-217ENST00000557782 GOLGA8CPA6NN73 597 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 WASLO00401 505 aaPredicted RBP5.45□□□□□ -1.54
TDP1-217ENST00000557782 PPP1R12BO60237 982 aaPredicted RBP5.45□□□□□ -1.54
TDP1-217ENST00000557782 IGHA2P01877 340 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 USP5P45974 858 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 TNNI2P48788 182 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 GDF10P55107 478 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 RAB15P59190 212 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 RBL2Q08999 1139 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 VARS2Q5ST30 1063 aaKnown RBP5.45□□□□□ -1.54
TDP1-217ENST00000557782 PTCRAQ6ISU1 281 aaPredicted RBP5.45□□□□□ -1.54
TDP1-217ENST00000557782 TNS4Q8IZW8 715 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 ZNF511Q8NB15 262 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 BAP1Q92560 729 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 FOXJ1Q92949 421 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 C1QTNF2Q9BXJ5 285 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 NIF3L1Q9GZT8 377 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 SAP130Q9H0E3 1048 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 TSPAN10Q9H1Z9 355 aaPredicted RBP5.45□□□□□ -1.54
TDP1-217ENST00000557782 ZSWIM4Q9H7M6 989 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 RNF19AQ9NV58 838 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.45□□□□□ -1.54
TDP1-217ENST00000557782 EMILIN1Q9Y6C2 1016 aa5.45□□□□□ -1.54
TDP1-217ENST00000557782 SBNO2Q9Y2G9 1366 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 SOWAHBA6NEL2 793 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 STK10O94804 968 aaKnown RBP5.44□□□□□ -1.54
TDP1-217ENST00000557782 CLSTN1O94985 981 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 POTEJP0CG39 1038 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 LINC01559Q495D7 138 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 TRMT44Q8IYL2 757 aaKnown RBP5.44□□□□□ -1.54
TDP1-217ENST00000557782 STAG2Q8N3U4 1231 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 OSBPL2Q9H1P3 480 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 CHMP3Q9Y3E7 222 aa5.44□□□□□ -1.54
TDP1-217ENST00000557782 TNFRSF10BO14763 440 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 ADH1BP00325 375 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 BRD2P25440 801 aaKnown RBP5.43□□□□□ -1.54
TDP1-217ENST00000557782 COX20Q5RI15 118 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms