RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 AK7Q96M32 723 aa31.46■■■□□ 2.63
RIPK3-207ENST00000557662 KNSTRNQ9Y448 316 aa31.46■■■□□ 2.63
RIPK3-207ENST00000557662 ERVV-2B6SEH9 535 aa31.45■■■□□ 2.63
RIPK3-207ENST00000557662 AEBP1Q8IUX7 1158 aa31.45■■■□□ 2.63
RIPK3-207ENST00000557662 KLHL34Q8N239 644 aa31.45■■■□□ 2.63
RIPK3-207ENST00000557662 KIF13BQ9NQT8 1826 aa31.45■■■□□ 2.62
RIPK3-207ENST00000557662 DCAF5Q96JK2 942 aa31.44■■■□□ 2.62
RIPK3-207ENST00000557662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.43■■■□□ 2.62
RIPK3-207ENST00000557662 GPR162Q16538 588 aa31.43■■■□□ 2.62
RIPK3-207ENST00000557662 SMIM5Q71RC9 77 aa31.43■■■□□ 2.62
RIPK3-207ENST00000557662 SLC4A9Q96Q91 983 aa31.43■■■□□ 2.62
RIPK3-207ENST00000557662 C4AP0C0L4 1744 aa31.42■■■□□ 2.62
RIPK3-207ENST00000557662 PER1O15534 1290 aaPredicted RBP31.42■■■□□ 2.62
RIPK3-207ENST00000557662 HSP90AB1P08238 724 aaKnown RBP31.42■■■□□ 2.62
RIPK3-207ENST00000557662 IL13P35225 146 aa31.42■■■□□ 2.62
RIPK3-207ENST00000557662 AMOTQ4VCS5 1084 aa31.42■■■□□ 2.62
RIPK3-207ENST00000557662 PLEKHO1Q53GL0 409 aaPredicted RBP31.42■■■□□ 2.62
RIPK3-207ENST00000557662 CD2APQ9Y5K6 639 aa31.41■■■□□ 2.62
RIPK3-207ENST00000557662 YBX3P16989 372 aaKnown RBP eCLIP31.4■■■□□ 2.62
RIPK3-207ENST00000557662 ADAMTS7Q9UKP4 1686 aa31.4■■■□□ 2.62
RIPK3-207ENST00000557662 TJP1Q07157 1748 aa31.4■■■□□ 2.62
RIPK3-207ENST00000557662 KIAA1551Q9HCM1 1747 aa31.4■■■□□ 2.62
RIPK3-207ENST00000557662 ATP6V1AP38606 617 aa31.39■■■□□ 2.62
RIPK3-207ENST00000557662 ZNF530Q6P9A1 599 aaPredicted RBP31.38■■■□□ 2.61
RIPK3-207ENST00000557662 PHF14O94880 888 aa31.37■■■□□ 2.61
RIPK3-207ENST00000557662 SULT6B1Q6IMI4 303 aa31.35■■■□□ 2.61
RIPK3-207ENST00000557662 GNPATO15228 680 aa31.34■■■□□ 2.61
RIPK3-207ENST00000557662 MRC1P22897 1456 aa31.33■■■□□ 2.61
RIPK3-207ENST00000557662 NPC1L1Q9UHC9 1359 aa31.31■■■□□ 2.6
RIPK3-207ENST00000557662 CNTNAP4Q9C0A0 1308 aa31.31■■■□□ 2.6
RIPK3-207ENST00000557662 RC3H1Q5TC82 1133 aaKnown RBP31.31■■■□□ 2.6
RIPK3-207ENST00000557662 COL3A1P02461 1466 aaPredicted RBP31.31■■■□□ 2.6
RIPK3-207ENST00000557662 GRIN3BO60391 1043 aa31.29■■■□□ 2.6
RIPK3-207ENST00000557662 MTHFSP49914 203 aa31.29■■■□□ 2.6
RIPK3-207ENST00000557662 PELP1Q8IZL8 1130 aaKnown RBP31.29■■■□□ 2.6
RIPK3-207ENST00000557662 BRCA1P38398 1863 aaKnown RBP31.29■■■□□ 2.6
RIPK3-207ENST00000557662 CABP4P57796 275 aa31.28■■■□□ 2.6
RIPK3-207ENST00000557662 C1orf141Q5JVX7 400 aa31.27■■■□□ 2.6
RIPK3-207ENST00000557662 N4BP2Q86UW6 1770 aaPredicted RBP31.26■■■□□ 2.59
RIPK3-207ENST00000557662 UBR2Q8IWV8 1755 aa31.26■■■□□ 2.59
RIPK3-207ENST00000557662 ADRA2BP18089 450 aa31.25■■■□□ 2.59
RIPK3-207ENST00000557662 RBM42Q9BTD8 480 aaKnown RBP31.25■■■□□ 2.59
RIPK3-207ENST00000557662 RTCBQ9Y3I0 505 aaKnown RBP31.25■■■□□ 2.59
RIPK3-207ENST00000557662 NFATC2IPQ8NCF5 419 aa31.24■■■□□ 2.59
RIPK3-207ENST00000557662 AKAP4Q5JQC9 854 aa31.23■■■□□ 2.59
RIPK3-207ENST00000557662 RPS6KA4O75676 772 aa31.22■■■□□ 2.59
RIPK3-207ENST00000557662 SIPA1L3O60292 1781 aaPredicted RBP31.21■■■□□ 2.59
RIPK3-207ENST00000557662 TRAPPC3LQ5T215 181 aa31.21■■■□□ 2.59
RIPK3-207ENST00000557662 ARHGEF1Q92888 912 aaKnown RBP31.21■■■□□ 2.59
RIPK3-207ENST00000557662 C10orf71Q711Q0 1435 aa31.21■■■□□ 2.59
RIPK3-207ENST00000557662 ADCY9O60503 1353 aa31.2■■■□□ 2.59
RIPK3-207ENST00000557662 KCPQ6ZWJ8 1503 aa31.2■■■□□ 2.59
RIPK3-207ENST00000557662 PXDNLA1KZ92 1463 aa31.2■■■□□ 2.58
RIPK3-207ENST00000557662 MMP10P09238 476 aa31.19■■■□□ 2.58
RIPK3-207ENST00000557662 GYS1P13807 737 aa31.18■■■□□ 2.58
RIPK3-207ENST00000557662 CC2D1BQ5T0F9 858 aaKnown RBP31.18■■■□□ 2.58
RIPK3-207ENST00000557662 PTCD1O75127 700 aaKnown RBP31.17■■■□□ 2.58
RIPK3-207ENST00000557662 SLC52A2Q9HAB3 445 aa31.17■■■□□ 2.58
RIPK3-207ENST00000557662 HMOX1P09601 288 aa31.16■■■□□ 2.58
RIPK3-207ENST00000557662 NLGN1Q8N2Q7 840 aa31.16■■■□□ 2.58
RIPK3-207ENST00000557662 LGR6Q9HBX8 967 aa31.16■■■□□ 2.58
RIPK3-207ENST00000557662 DIAPH1O60610 1272 aaKnown RBP31.15■■■□□ 2.58
RIPK3-207ENST00000557662 CRKLP46109 303 aaKnown RBP31.15■■■□□ 2.58
RIPK3-207ENST00000557662 RNMTO43148 476 aaKnown RBP31.14■■■□□ 2.58
RIPK3-207ENST00000557662 ARFGEF1Q9Y6D6 1849 aa31.14■■■□□ 2.58
RIPK3-207ENST00000557662 C1QTNF8P60827 252 aa31.13■■■□□ 2.57
RIPK3-207ENST00000557662 MTHFSDQ2M296 383 aaKnown RBP31.13■■■□□ 2.57
RIPK3-207ENST00000557662 INTS5Q6P9B9 1019 aaKnown RBP31.11■■■□□ 2.57
RIPK3-207ENST00000557662 ATP10DQ9P241 1426 aa31.11■■■□□ 2.57
RIPK3-207ENST00000557662 RFC4P35249 363 aa31.1■■■□□ 2.57
RIPK3-207ENST00000557662 USP42Q9H9J4 1324 aaKnown RBP31.09■■■□□ 2.57
RIPK3-207ENST00000557662 AFDNP55196 1824 aaKnown RBP31.09■■■□□ 2.57
RIPK3-207ENST00000557662 NRXN2Q9P2S2 1712 aa31.08■■■□□ 2.57
RIPK3-207ENST00000557662 TGFB2P61812 414 aa31.08■■■□□ 2.57
RIPK3-207ENST00000557662 DNAJC10Q8IXB1 793 aa31.06■■■□□ 2.56
RIPK3-207ENST00000557662 SOS1Q07889 1333 aaPredicted RBP31.04■■■□□ 2.56
RIPK3-207ENST00000557662 GIGYF1O75420 1035 aaPredicted RBP31.04■■■□□ 2.56
RIPK3-207ENST00000557662 SLC39A6Q13433 755 aa31.04■■■□□ 2.56
RIPK3-207ENST00000557662 SRP68Q9UHB9 627 aaKnown RBP31.04■■■□□ 2.56
RIPK3-207ENST00000557662 CYP19A1P11511 503 aaPredicted RBP31.03■■■□□ 2.56
RIPK3-207ENST00000557662 WWC3Q9ULE0 1092 aa31.03■■■□□ 2.56
RIPK3-207ENST00000557662 FKBP8Q14318 412 aa31.02■■■□□ 2.56
RIPK3-207ENST00000557662 CCDC87Q9NVE4 849 aa31.02■■■□□ 2.56
RIPK3-207ENST00000557662 DDR1Q08345 913 aa31.01■■■□□ 2.55
RIPK3-207ENST00000557662 DLEC1Q9Y238 1755 aa31■■■□□ 2.55
RIPK3-207ENST00000557662 VSIG10Q8N0Z9 540 aa31■■■□□ 2.55
RIPK3-207ENST00000557662 PARP3Q9Y6F1 533 aa31■■■□□ 2.55
RIPK3-207ENST00000557662 KCNA3P22001 575 aa30.99■■■□□ 2.55
RIPK3-207ENST00000557662 A0A0G2JLW4 131 aa30.98■■■□□ 2.55
RIPK3-207ENST00000557662 CEMIPQ8WUJ3 1361 aa30.97■■■□□ 2.55
RIPK3-207ENST00000557662 TM4SF1P30408 202 aa30.97■■■□□ 2.55
RIPK3-207ENST00000557662 IL17REQ8NFR9 667 aa30.97■■■□□ 2.55
RIPK3-207ENST00000557662 COL15A1P39059 1388 aa30.96■■■□□ 2.55
RIPK3-207ENST00000557662 DPEP1P16444 411 aa30.96■■■□□ 2.55
RIPK3-207ENST00000557662 SCN7AQ01118 1682 aa30.96■■■□□ 2.55
RIPK3-207ENST00000557662 SBF1O95248 1867 aa30.95■■■□□ 2.55
RIPK3-207ENST00000557662 ZBTB1Q9Y2K1 713 aa30.95■■■□□ 2.55
RIPK3-207ENST00000557662 POLRMTO00411 1230 aaKnown RBP30.94■■■□□ 2.54
RIPK3-207ENST00000557662 U2SURPO15042 1029 aaKnown RBP30.94■■■□□ 2.54
RIPK3-207ENST00000557662 GAS2L2Q8NHY3 880 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms