RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 TMF1P82094 1093 aa25.71■■□□□ 1.71
PRKCH-223ENST00000557294 JMYQ8N9B5 988 aa25.71■■□□□ 1.71
PRKCH-223ENST00000557294 COL13A1Q5TAT6 717 aaPredicted RBP25.7■■□□□ 1.7
PRKCH-223ENST00000557294 FCHSD2O94868 740 aa25.69■■□□□ 1.7
PRKCH-223ENST00000557294 DPEP1P16444 411 aa25.69■■□□□ 1.7
PRKCH-223ENST00000557294 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
PRKCH-223ENST00000557294 RTCBQ9Y3I0 505 aaKnown RBP25.69■■□□□ 1.7
PRKCH-223ENST00000557294 FSTL1Q12841 308 aa25.68■■□□□ 1.7
PRKCH-223ENST00000557294 C16orf71Q8IYS4 520 aaPredicted RBP25.68■■□□□ 1.7
PRKCH-223ENST00000557294 CCDC87Q9NVE4 849 aa25.68■■□□□ 1.7
PRKCH-223ENST00000557294 KIF13BQ9NQT8 1826 aa25.67■■□□□ 1.7
PRKCH-223ENST00000557294 NCAPD2Q15021 1401 aa25.67■■□□□ 1.7
PRKCH-223ENST00000557294 C9orf131Q5VYM1 1079 aa25.67■■□□□ 1.7
PRKCH-223ENST00000557294 PKD1L3Q7Z443 1732 aa25.67■■□□□ 1.7
PRKCH-223ENST00000557294 IFNL2Q8IZJ0 200 aa25.67■■□□□ 1.7
PRKCH-223ENST00000557294 EMILIN1Q9Y6C2 1016 aa25.67■■□□□ 1.7
PRKCH-223ENST00000557294 C10orf71Q711Q0 1435 aa25.66■■□□□ 1.7
PRKCH-223ENST00000557294 HTRA3P83110 453 aa25.66■■□□□ 1.7
PRKCH-223ENST00000557294 ARHGEF1Q92888 912 aaKnown RBP25.66■■□□□ 1.7
PRKCH-223ENST00000557294 KIAA1551Q9HCM1 1747 aa25.66■■□□□ 1.7
PRKCH-223ENST00000557294 PHKG2P15735 406 aa25.65■■□□□ 1.7
PRKCH-223ENST00000557294 ADRA2BP18089 450 aa25.65■■□□□ 1.7
PRKCH-223ENST00000557294 KCNA3P22001 575 aa25.65■■□□□ 1.7
PRKCH-223ENST00000557294 TONSLQ96HA7 1378 aa25.65■■□□□ 1.7
PRKCH-223ENST00000557294 N4BP2Q86UW6 1770 aaPredicted RBP25.64■■□□□ 1.7
PRKCH-223ENST00000557294 RC3H1Q5TC82 1133 aaKnown RBP25.64■■□□□ 1.7
PRKCH-223ENST00000557294 WDR90Q96KV7 1748 aa25.63■■□□□ 1.69
PRKCH-223ENST00000557294 GYS1P13807 737 aa25.63■■□□□ 1.69
PRKCH-223ENST00000557294 EYA1Q99502 592 aa25.63■■□□□ 1.69
PRKCH-223ENST00000557294 PARP3Q9Y6F1 533 aa25.63■■□□□ 1.69
PRKCH-223ENST00000557294 WASHC2AQ641Q2 1341 aa25.62■■□□□ 1.69
PRKCH-223ENST00000557294 KDM2BQ8NHM5 1336 aa25.62■■□□□ 1.69
PRKCH-223ENST00000557294 PLEKHG2Q9H7P9 1386 aa25.61■■□□□ 1.69
PRKCH-223ENST00000557294 PPM1GO15355 546 aaPredicted RBP25.61■■□□□ 1.69
PRKCH-223ENST00000557294 RFC4P35249 363 aa25.61■■□□□ 1.69
PRKCH-223ENST00000557294 SLC4A9Q96Q91 983 aa25.61■■□□□ 1.69
PRKCH-223ENST00000557294 PIM2Q9P1W9 311 aa25.61■■□□□ 1.69
PRKCH-223ENST00000557294 RPS6KA4O75676 772 aa25.6■■□□□ 1.69
PRKCH-223ENST00000557294 RRAGCQ9HB90 399 aa25.59■■□□□ 1.69
PRKCH-223ENST00000557294 PCNTO95613 3336 aa25.58■■□□□ 1.69
PRKCH-223ENST00000557294 KDRP35968 1356 aa25.58■■□□□ 1.69
PRKCH-223ENST00000557294 TNS4Q8IZW8 715 aa25.58■■□□□ 1.69
PRKCH-223ENST00000557294 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
PRKCH-223ENST00000557294 RBM42Q9BTD8 480 aaKnown RBP25.58■■□□□ 1.69
PRKCH-223ENST00000557294 CARD14Q9BXL6 1004 aa25.58■■□□□ 1.69
PRKCH-223ENST00000557294 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
PRKCH-223ENST00000557294 CAPN15O75808 1086 aa25.57■■□□□ 1.68
PRKCH-223ENST00000557294 DALRD3Q5D0E6 543 aaKnown RBP25.57■■□□□ 1.68
PRKCH-223ENST00000557294 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
PRKCH-223ENST00000557294 PRELPP51888 382 aa25.56■■□□□ 1.68
PRKCH-223ENST00000557294 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
PRKCH-223ENST00000557294 RNF181Q9P0P0 153 aa25.55■■□□□ 1.68
PRKCH-223ENST00000557294 C4AP0C0L4 1744 aa25.54■■□□□ 1.68
PRKCH-223ENST00000557294 KCPQ6ZWJ8 1503 aa25.54■■□□□ 1.68
PRKCH-223ENST00000557294 SMC1BQ8NDV3 1235 aa25.53■■□□□ 1.68
PRKCH-223ENST00000557294 KIF20BQ96Q89 1820 aa25.52■■□□□ 1.68
PRKCH-223ENST00000557294 BRCA1P38398 1863 aaKnown RBP25.52■■□□□ 1.68
PRKCH-223ENST00000557294 ZNF831Q5JPB2 1677 aa25.51■■□□□ 1.67
PRKCH-223ENST00000557294 HSP90AB1P08238 724 aaKnown RBP25.5■■□□□ 1.67
PRKCH-223ENST00000557294 POLKQ9UBT6 870 aa25.5■■□□□ 1.67
PRKCH-223ENST00000557294 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
PRKCH-223ENST00000557294 FKBP8Q14318 412 aa25.47■■□□□ 1.67
PRKCH-223ENST00000557294 CHRNA5P30532 468 aa25.46■■□□□ 1.67
PRKCH-223ENST00000557294 CABP4P57796 275 aa25.46■■□□□ 1.67
PRKCH-223ENST00000557294 DDR1Q08345 913 aa25.46■■□□□ 1.67
PRKCH-223ENST00000557294 EIF4A2Q14240 407 aaKnown RBP25.46■■□□□ 1.67
PRKCH-223ENST00000557294 ZC3H4Q9UPT8 1303 aaKnown RBP25.45■■□□□ 1.66
PRKCH-223ENST00000557294 SRP68Q9UHB9 627 aaKnown RBP25.45■■□□□ 1.66
PRKCH-223ENST00000557294 USP42Q9H9J4 1324 aaKnown RBP25.44■■□□□ 1.66
PRKCH-223ENST00000557294 TM4SF1P30408 202 aa25.44■■□□□ 1.66
PRKCH-223ENST00000557294 COL5A3P25940 1745 aaPredicted RBP25.43■■□□□ 1.66
PRKCH-223ENST00000557294 ANKRD26Q9UPS8 1709 aa25.43■■□□□ 1.66
PRKCH-223ENST00000557294 VEGFAP15692 232 aaPredicted RBP25.43■■□□□ 1.66
PRKCH-223ENST00000557294 CRKLP46109 303 aaKnown RBP25.43■■□□□ 1.66
PRKCH-223ENST00000557294 PLEKHO1Q53GL0 409 aaPredicted RBP25.43■■□□□ 1.66
PRKCH-223ENST00000557294 PTCD1O75127 700 aaKnown RBP25.42■■□□□ 1.66
PRKCH-223ENST00000557294 GLTPD2A6NH11 291 aa25.41■■□□□ 1.66
PRKCH-223ENST00000557294 POLRMTO00411 1230 aaKnown RBP25.41■■□□□ 1.66
PRKCH-223ENST00000557294 HSPA1AP0DMV8 641 aaKnown RBP25.41■■□□□ 1.66
PRKCH-223ENST00000557294 HSPA1BP0DMV9 641 aaKnown RBP25.41■■□□□ 1.66
PRKCH-223ENST00000557294 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
PRKCH-223ENST00000557294 TNRC6CQ9HCJ0 1690 aaKnown RBP25.4■■□□□ 1.66
PRKCH-223ENST00000557294 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
PRKCH-223ENST00000557294 MTHFSP49914 203 aa25.39■■□□□ 1.66
PRKCH-223ENST00000557294 SBF1O95248 1867 aa25.38■■□□□ 1.65
PRKCH-223ENST00000557294 LMNB1P20700 586 aa25.38■■□□□ 1.65
PRKCH-223ENST00000557294 NFATC2IPQ8NCF5 419 aa25.38■■□□□ 1.65
PRKCH-223ENST00000557294 ZNF530Q6P9A1 599 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-223ENST00000557294 INTS5Q6P9B9 1019 aaKnown RBP25.37■■□□□ 1.65
PRKCH-223ENST00000557294 KDM6AO15550 1401 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-223ENST00000557294 RASSF7Q02833 373 aa25.36■■□□□ 1.65
PRKCH-223ENST00000557294 ZPR1O75312 459 aa25.35■■□□□ 1.65
PRKCH-223ENST00000557294 TNNT2P45379 298 aaPredicted RBP25.33■■□□□ 1.65
PRKCH-223ENST00000557294 USPL1Q5W0Q7 1092 aa25.33■■□□□ 1.65
PRKCH-223ENST00000557294 C1orf141Q5JVX7 400 aa25.32■■□□□ 1.64
PRKCH-223ENST00000557294 TTLL6Q8N841 843 aa25.31■■□□□ 1.64
PRKCH-223ENST00000557294 POTECB2RU33 542 aa25.3■■□□□ 1.64
PRKCH-223ENST00000557294 NFIXQ14938 502 aa25.29■■□□□ 1.64
PRKCH-223ENST00000557294 DPY19L2Q6NUT2 758 aa25.28■■□□□ 1.64
PRKCH-223ENST00000557294 NARFQ9UHQ1 456 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms