RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 INHAP05111 366 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 SIX5Q8N196 739 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00871-204ENST00000556886 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 NLRP3Q96P20 1036 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
LINC00871-204ENST00000556886 ABCC9O60706 1549 aa11.4□□□□□ -0.58
LINC00871-204ENST00000556886 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
LINC00871-204ENST00000556886 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
LINC00871-204ENST00000556886 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
LINC00871-204ENST00000556886 HRH3Q9Y5N1 445 aa11.4□□□□□ -0.58
LINC00871-204ENST00000556886 ZNF358Q9NW07 568 aa11.39□□□□□ -0.59
LINC00871-204ENST00000556886 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
LINC00871-204ENST00000556886 DPYDQ12882 1025 aa11.38□□□□□ -0.59
LINC00871-204ENST00000556886 ANKMY2Q8IV38 441 aa11.38□□□□□ -0.59
LINC00871-204ENST00000556886 RNF217Q8TC41 542 aa11.38□□□□□ -0.59
LINC00871-204ENST00000556886 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
LINC00871-204ENST00000556886 DNMT3LQ9UJW3 386 aa11.38□□□□□ -0.59
LINC00871-204ENST00000556886 FIGNL2A6NMB9 653 aa11.37□□□□□ -0.59
LINC00871-204ENST00000556886 SOBPA7XYQ1 873 aa11.37□□□□□ -0.59
LINC00871-204ENST00000556886 SFI1A8K8P3 1242 aa11.37□□□□□ -0.59
LINC00871-204ENST00000556886 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
LINC00871-204ENST00000556886 ATG7O95352 703 aa11.37□□□□□ -0.59
LINC00871-204ENST00000556886 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
LINC00871-204ENST00000556886 RNF144AP50876 292 aaPredicted RBP11.37□□□□□ -0.59
LINC00871-204ENST00000556886 CENPCQ03188 943 aa11.37□□□□□ -0.59
LINC00871-204ENST00000556886 ARXQ96QS3 562 aa11.37□□□□□ -0.59
LINC00871-204ENST00000556886 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
LINC00871-204ENST00000556886 GPC1P35052 558 aa11.36□□□□□ -0.59
LINC00871-204ENST00000556886 TLR1Q15399 786 aa11.36□□□□□ -0.59
LINC00871-204ENST00000556886 FHDC1Q9C0D6 1143 aaPredicted RBP11.36□□□□□ -0.59
LINC00871-204ENST00000556886 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
LINC00871-204ENST00000556886 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
LINC00871-204ENST00000556886 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
LINC00871-204ENST00000556886 MAN1A2O60476 641 aa11.35□□□□□ -0.59
LINC00871-204ENST00000556886 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
LINC00871-204ENST00000556886 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
LINC00871-204ENST00000556886 BACH1O14867 736 aa11.34□□□□□ -0.59
LINC00871-204ENST00000556886 SEC13P55735 322 aa11.34□□□□□ -0.59
LINC00871-204ENST00000556886 GRIP2Q9C0E4 1043 aa11.34□□□□□ -0.59
LINC00871-204ENST00000556886 SMTNP53814 917 aa11.33□□□□□ -0.6
LINC00871-204ENST00000556886 ELOAQ14241 798 aaKnown RBP11.33□□□□□ -0.6
LINC00871-204ENST00000556886 PRICKLE2Q7Z3G6 844 aa11.33□□□□□ -0.6
LINC00871-204ENST00000556886 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
LINC00871-204ENST00000556886 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
LINC00871-204ENST00000556886 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
LINC00871-204ENST00000556886 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
LINC00871-204ENST00000556886 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
LINC00871-204ENST00000556886 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
LINC00871-204ENST00000556886 A6NJY4 79 aa11.31□□□□□ -0.6
LINC00871-204ENST00000556886 M0R2N6 131 aa11.31□□□□□ -0.6
LINC00871-204ENST00000556886 EPHA4P54764 986 aa11.31□□□□□ -0.6
LINC00871-204ENST00000556886 MTFR1Q15390 333 aa11.31□□□□□ -0.6
LINC00871-204ENST00000556886 LYSMD3Q7Z3D4 306 aa11.31□□□□□ -0.6
LINC00871-204ENST00000556886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.6
LINC00871-204ENST00000556886 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
LINC00871-204ENST00000556886 LGR5O75473 907 aa11.29□□□□□ -0.6
LINC00871-204ENST00000556886 RHOQP17081 205 aa11.29□□□□□ -0.6
LINC00871-204ENST00000556886 TMEM164Q5U3C3 297 aa11.29□□□□□ -0.6
LINC00871-204ENST00000556886 TMEM214Q6NUQ4 689 aaKnown RBP11.29□□□□□ -0.6
LINC00871-204ENST00000556886 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
LINC00871-204ENST00000556886 POU4F2Q12837 409 aa11.28□□□□□ -0.6
LINC00871-204ENST00000556886 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
LINC00871-204ENST00000556886 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
LINC00871-204ENST00000556886 MYO15BQ96JP2 1530 aa11.28□□□□□ -0.6
LINC00871-204ENST00000556886 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
LINC00871-204ENST00000556886 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
LINC00871-204ENST00000556886 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
LINC00871-204ENST00000556886 HINFPQ9BQA5 517 aa11.27□□□□□ -0.61
LINC00871-204ENST00000556886 CDK2AP1O14519 115 aa11.26□□□□□ -0.61
LINC00871-204ENST00000556886 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
LINC00871-204ENST00000556886 FOXK2Q01167 660 aa11.26□□□□□ -0.61
LINC00871-204ENST00000556886 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
LINC00871-204ENST00000556886 SLC9A9Q8IVB4 645 aa11.26□□□□□ -0.61
LINC00871-204ENST00000556886 RHBDD1Q8TEB9 315 aa11.26□□□□□ -0.61
LINC00871-204ENST00000556886 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
LINC00871-204ENST00000556886 FAM69CQ0P6D2 419 aa11.25□□□□□ -0.61
LINC00871-204ENST00000556886 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
LINC00871-204ENST00000556886 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
LINC00871-204ENST00000556886 TAS1R3Q7RTX0 852 aa11.25□□□□□ -0.61
LINC00871-204ENST00000556886 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
LINC00871-204ENST00000556886 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
LINC00871-204ENST00000556886 PHKA2P46019 1235 aa11.24□□□□□ -0.61
LINC00871-204ENST00000556886 PTSQ03393 145 aa11.24□□□□□ -0.61
LINC00871-204ENST00000556886 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
LINC00871-204ENST00000556886 SWI5Q1ZZU3 235 aa11.23□□□□□ -0.61
LINC00871-204ENST00000556886 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
LINC00871-204ENST00000556886 C21orf2O43822 256 aa11.22□□□□□ -0.61
LINC00871-204ENST00000556886 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
LINC00871-204ENST00000556886 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
LINC00871-204ENST00000556886 CABP1Q9NZU7 370 aa11.22□□□□□ -0.61
LINC00871-204ENST00000556886 CARNS1A5YM72 827 aa11.21□□□□□ -0.61
LINC00871-204ENST00000556886 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
LINC00871-204ENST00000556886 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
LINC00871-204ENST00000556886 WDR44Q5JSH3 913 aa11.21□□□□□ -0.61
LINC00871-204ENST00000556886 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
LINC00871-204ENST00000556886 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
LINC00871-204ENST00000556886 SCG3Q8WXD2 468 aaKnown RBP11.21□□□□□ -0.61
LINC00871-204ENST00000556886 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms