RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 RC3H1Q5TC82 1133 aaKnown RBP23.39■■□□□ 1.33
CHGA-206ENST00000556876 RTCBQ9Y3I0 505 aaKnown RBP23.39■■□□□ 1.33
CHGA-206ENST00000556876 GIGYF1O75420 1035 aaPredicted RBP23.38■■□□□ 1.33
CHGA-206ENST00000556876 YBX3P16989 372 aaKnown RBP eCLIP23.38■■□□□ 1.33
CHGA-206ENST00000556876 CABP4P57796 275 aa23.38■■□□□ 1.33
CHGA-206ENST00000556876 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
CHGA-206ENST00000556876 NLGN1Q8N2Q7 840 aa23.38■■□□□ 1.33
CHGA-206ENST00000556876 C4BP0C0L5 1744 aa23.38■■□□□ 1.33
CHGA-206ENST00000556876 MAP2P11137 1827 aaKnown RBP23.38■■□□□ 1.33
CHGA-206ENST00000556876 MTHFSP49914 203 aa23.37■■□□□ 1.33
CHGA-206ENST00000556876 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
CHGA-206ENST00000556876 TUBGCP6Q96RT7 1819 aa23.37■■□□□ 1.33
CHGA-206ENST00000556876 ITPK1Q13572 414 aa23.36■■□□□ 1.33
CHGA-206ENST00000556876 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
CHGA-206ENST00000556876 ITGB4P16144 1822 aa23.33■■□□□ 1.32
CHGA-206ENST00000556876 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.32
CHGA-206ENST00000556876 SULT6B1Q6IMI4 303 aa23.32■■□□□ 1.32
CHGA-206ENST00000556876 AMIGO3Q86WK7 504 aa23.32■■□□□ 1.32
CHGA-206ENST00000556876 TOGARAM1Q9Y4F4 1720 aa23.32■■□□□ 1.32
CHGA-206ENST00000556876 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
CHGA-206ENST00000556876 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
CHGA-206ENST00000556876 RFC4P35249 363 aa23.31■■□□□ 1.32
CHGA-206ENST00000556876 TGFB2P61812 414 aa23.3■■□□□ 1.32
CHGA-206ENST00000556876 KDRP35968 1356 aa23.29■■□□□ 1.32
CHGA-206ENST00000556876 SENP3-EIF4A1A0A087X0R7 540 aa23.29■■□□□ 1.32
CHGA-206ENST00000556876 MMP10P09238 476 aa23.29■■□□□ 1.32
CHGA-206ENST00000556876 IL13P35225 146 aa23.29■■□□□ 1.32
CHGA-206ENST00000556876 AKAP4Q5JQC9 854 aa23.28■■□□□ 1.32
CHGA-206ENST00000556876 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
CHGA-206ENST00000556876 NFATC2IPQ8NCF5 419 aa23.27■■□□□ 1.32
CHGA-206ENST00000556876 ARHGEF1Q92888 912 aaKnown RBP23.27■■□□□ 1.32
CHGA-206ENST00000556876 AEBP1Q8IUX7 1158 aa23.26■■□□□ 1.31
CHGA-206ENST00000556876 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
CHGA-206ENST00000556876 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
CHGA-206ENST00000556876 SLC4A9Q96Q91 983 aa23.25■■□□□ 1.31
CHGA-206ENST00000556876 GPBP1L1Q9HC44 474 aaPredicted RBP23.25■■□□□ 1.31
CHGA-206ENST00000556876 PARP3Q9Y6F1 533 aa23.25■■□□□ 1.31
CHGA-206ENST00000556876 UBR3Q6ZT12 1888 aa23.24■■□□□ 1.31
CHGA-206ENST00000556876 KDM6AO15550 1401 aaPredicted RBP23.24■■□□□ 1.31
CHGA-206ENST00000556876 PTCD1O75127 700 aaKnown RBP23.23■■□□□ 1.31
CHGA-206ENST00000556876 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
CHGA-206ENST00000556876 KIF7Q2M1P5 1343 aa23.22■■□□□ 1.31
CHGA-206ENST00000556876 GYS1P13807 737 aa23.21■■□□□ 1.31
CHGA-206ENST00000556876 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
CHGA-206ENST00000556876 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
CHGA-206ENST00000556876 DIAPH1O60610 1272 aaKnown RBP23.19■■□□□ 1.3
CHGA-206ENST00000556876 SLC52A2Q9HAB3 445 aa23.19■■□□□ 1.3
CHGA-206ENST00000556876 PER1O15534 1290 aaPredicted RBP23.18■■□□□ 1.3
CHGA-206ENST00000556876 ADCY9O60503 1353 aa23.16■■□□□ 1.3
CHGA-206ENST00000556876 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
CHGA-206ENST00000556876 ZPR1O75312 459 aa23.15■■□□□ 1.3
CHGA-206ENST00000556876 VSIG10Q8N0Z9 540 aa23.15■■□□□ 1.3
CHGA-206ENST00000556876 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
CHGA-206ENST00000556876 BCS1LQ9Y276 419 aa23.14■■□□□ 1.29
CHGA-206ENST00000556876 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
CHGA-206ENST00000556876 A0A0G2JLW4 131 aa23.13■■□□□ 1.29
CHGA-206ENST00000556876 C10orf71Q711Q0 1435 aa23.13■■□□□ 1.29
CHGA-206ENST00000556876 HMOX1P09601 288 aa23.12■■□□□ 1.29
CHGA-206ENST00000556876 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
CHGA-206ENST00000556876 INTS5Q6P9B9 1019 aaKnown RBP23.12■■□□□ 1.29
CHGA-206ENST00000556876 PIM2Q9P1W9 311 aa23.12■■□□□ 1.29
CHGA-206ENST00000556876 PXDNLA1KZ92 1463 aa23.11■■□□□ 1.29
CHGA-206ENST00000556876 FCHSD2O94868 740 aa23.11■■□□□ 1.29
CHGA-206ENST00000556876 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
CHGA-206ENST00000556876 DPEP1P16444 411 aa23.1■■□□□ 1.29
CHGA-206ENST00000556876 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
CHGA-206ENST00000556876 ARHGAP27Q6ZUM4 889 aa23.1■■□□□ 1.29
CHGA-206ENST00000556876 GAS2L2Q8NHY3 880 aa23.1■■□□□ 1.29
CHGA-206ENST00000556876 WWC3Q9ULE0 1092 aa23.1■■□□□ 1.29
CHGA-206ENST00000556876 TEX13AQ9BXU3 409 aaPredicted RBP23.09■■□□□ 1.29
CHGA-206ENST00000556876 CICQ96RK0 1608 aaPredicted RBP23.08■■□□□ 1.29
CHGA-206ENST00000556876 STARD3NLO95772 234 aa23.08■■□□□ 1.29
CHGA-206ENST00000556876 CYP19A1P11511 503 aaPredicted RBP23.08■■□□□ 1.29
CHGA-206ENST00000556876 FKBP8Q14318 412 aa23.08■■□□□ 1.29
CHGA-206ENST00000556876 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
CHGA-206ENST00000556876 DNAJC10Q8IXB1 793 aa23.08■■□□□ 1.29
CHGA-206ENST00000556876 TTC5Q8N0Z6 440 aa23.08■■□□□ 1.29
CHGA-206ENST00000556876 TM4SF1P30408 202 aa23.07■■□□□ 1.28
CHGA-206ENST00000556876 ZNF526Q8TF50 670 aaPredicted RBP23.07■■□□□ 1.28
CHGA-206ENST00000556876 SRP68Q9UHB9 627 aaKnown RBP23.07■■□□□ 1.28
CHGA-206ENST00000556876 NARFQ9UHQ1 456 aa23.07■■□□□ 1.28
CHGA-206ENST00000556876 SOS1Q07889 1333 aaPredicted RBP23.07■■□□□ 1.28
CHGA-206ENST00000556876 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
CHGA-206ENST00000556876 COL5A3P25940 1745 aaPredicted RBP23.05■■□□□ 1.28
CHGA-206ENST00000556876 A0A087WZG4 1122 aa23.05■■□□□ 1.28
CHGA-206ENST00000556876 TEFQ10587 303 aa23.05■■□□□ 1.28
CHGA-206ENST00000556876 GNAT3A8MTJ3 354 aa23.04■■□□□ 1.28
CHGA-206ENST00000556876 U2SURPO15042 1029 aaKnown RBP23.04■■□□□ 1.28
CHGA-206ENST00000556876 HSPA6P17066 643 aa23.04■■□□□ 1.28
CHGA-206ENST00000556876 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
CHGA-206ENST00000556876 MRC1P22897 1456 aa23.04■■□□□ 1.28
CHGA-206ENST00000556876 C4AP0C0L4 1744 aa23.03■■□□□ 1.28
CHGA-206ENST00000556876 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
CHGA-206ENST00000556876 KCNA3P22001 575 aa23.03■■□□□ 1.28
CHGA-206ENST00000556876 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
CHGA-206ENST00000556876 NUDCQ9Y266 331 aa23.03■■□□□ 1.28
CHGA-206ENST00000556876 DDR1Q08345 913 aa23.02■■□□□ 1.28
CHGA-206ENST00000556876 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
CHGA-206ENST00000556876 KIF13BQ9NQT8 1826 aa23.02■■□□□ 1.28
CHGA-206ENST00000556876 CEP350Q5VT06 3117 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms