RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 SCN11AQ9UI33 1791 aa17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 G2E3Q7L622 706 aa17.66■□□□□ 0.42
EFCAB11-212ENST00000556639 PLCH1Q4KWH8 1693 aa17.66■□□□□ 0.42
EFCAB11-212ENST00000556639 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
EFCAB11-212ENST00000556639 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
EFCAB11-212ENST00000556639 MVPQ14764 893 aaKnown RBP17.66■□□□□ 0.42
EFCAB11-212ENST00000556639 IPO8O15397 1037 aaKnown RBP17.65■□□□□ 0.42
EFCAB11-212ENST00000556639 SLC52A2Q9HAB3 445 aa17.65■□□□□ 0.42
EFCAB11-212ENST00000556639 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
EFCAB11-212ENST00000556639 SHANK3Q9BYB0 1731 aa17.64■□□□□ 0.42
EFCAB11-212ENST00000556639 ITPRIPQ8IWB1 547 aa17.64■□□□□ 0.41
EFCAB11-212ENST00000556639 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
EFCAB11-212ENST00000556639 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
EFCAB11-212ENST00000556639 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
EFCAB11-212ENST00000556639 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
EFCAB11-212ENST00000556639 HSPA1LP34931 641 aa17.63■□□□□ 0.41
EFCAB11-212ENST00000556639 SKAP1Q86WV1 359 aa17.63■□□□□ 0.41
EFCAB11-212ENST00000556639 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
EFCAB11-212ENST00000556639 JCADQ9P266 1359 aa17.62■□□□□ 0.41
EFCAB11-212ENST00000556639 NRAPQ86VF7 1730 aa17.62■□□□□ 0.41
EFCAB11-212ENST00000556639 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
EFCAB11-212ENST00000556639 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
EFCAB11-212ENST00000556639 C8orf37Q96NL8 207 aa17.61■□□□□ 0.41
EFCAB11-212ENST00000556639 MS4A1P11836 297 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 RGS12O14924 1447 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 IGHDP01880 384 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 CABP4P57796 275 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
EFCAB11-212ENST00000556639 ANXA1P04083 346 aa17.59■□□□□ 0.41
EFCAB11-212ENST00000556639 HSP90AB1P08238 724 aaKnown RBP17.59■□□□□ 0.41
EFCAB11-212ENST00000556639 ABCC4O15439 1325 aa17.59■□□□□ 0.41
EFCAB11-212ENST00000556639 SLIT2O94813 1529 aa17.59■□□□□ 0.41
EFCAB11-212ENST00000556639 F6X3S4 739 aa17.59■□□□□ 0.41
EFCAB11-212ENST00000556639 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
EFCAB11-212ENST00000556639 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 NGLY1Q96IV0 654 aa17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 STK31Q9BXU1 1019 aa17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.41
EFCAB11-212ENST00000556639 LRP6O75581 1613 aa17.58■□□□□ 0.4
EFCAB11-212ENST00000556639 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
EFCAB11-212ENST00000556639 API5Q9BZZ5 524 aaKnown RBP17.58■□□□□ 0.4
EFCAB11-212ENST00000556639 MRC1P22897 1456 aa17.57■□□□□ 0.4
EFCAB11-212ENST00000556639 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
EFCAB11-212ENST00000556639 CHPF2Q9P2E5 772 aa17.57■□□□□ 0.4
EFCAB11-212ENST00000556639 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
EFCAB11-212ENST00000556639 FLIIQ13045 1269 aa17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 ZBTB7BO15156 539 aaPredicted RBP17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 PROSER3Q2NL68 480 aa17.55■□□□□ 0.4
EFCAB11-212ENST00000556639 EXOC5O00471 708 aa17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 PTPRCP08575 1304 aa17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 BCL9LQ86UU0 1499 aa17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 HOXB7P09629 217 aa17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 UNC5CLQ8IV45 518 aa17.54■□□□□ 0.4
EFCAB11-212ENST00000556639 NWD2Q9ULI1 1742 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 C5P01031 1676 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 WNK3Q9BYP7 1800 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
EFCAB11-212ENST00000556639 PIP4K2AP48426 406 aaPredicted RBP17.52■□□□□ 0.39
EFCAB11-212ENST00000556639 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.39
EFCAB11-212ENST00000556639 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.39
EFCAB11-212ENST00000556639 SPATA31A6Q5VVP1 1343 aa17.51■□□□□ 0.39
EFCAB11-212ENST00000556639 KAT6BQ8WYB5 2073 aa17.51■□□□□ 0.39
EFCAB11-212ENST00000556639 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
EFCAB11-212ENST00000556639 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
EFCAB11-212ENST00000556639 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
EFCAB11-212ENST00000556639 PIGBQ92521 554 aa17.5■□□□□ 0.39
EFCAB11-212ENST00000556639 PDIA6Q15084 440 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 DDB1Q16531 1140 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 FMNL2Q96PY5 1086 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 THRAP3Q9Y2W1 955 aaKnown RBP17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 AAMPQ13685 434 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 USP21Q9UK80 565 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 GLI3P10071 1580 aa17.49■□□□□ 0.39
EFCAB11-212ENST00000556639 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
EFCAB11-212ENST00000556639 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
EFCAB11-212ENST00000556639 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
EFCAB11-212ENST00000556639 TNS2Q63HR2 1409 aa17.48■□□□□ 0.39
EFCAB11-212ENST00000556639 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms