RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MTHFSP49914 203 aa14.34□□□□□ -0.11
SPTLC2-205ENST00000556607 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
SPTLC2-205ENST00000556607 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
SPTLC2-205ENST00000556607 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
SPTLC2-205ENST00000556607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-205ENST00000556607 ERVV-2B6SEH9 535 aa14.33□□□□□ -0.12
SPTLC2-205ENST00000556607 GNPATO15228 680 aa14.33□□□□□ -0.12
SPTLC2-205ENST00000556607 IL13P35225 146 aa14.33□□□□□ -0.12
SPTLC2-205ENST00000556607 LINC00116Q8NCU8 138 aa14.33□□□□□ -0.12
SPTLC2-205ENST00000556607 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
SPTLC2-205ENST00000556607 HMOX1P09601 288 aa14.32□□□□□ -0.12
SPTLC2-205ENST00000556607 NLGN2Q8NFZ4 835 aa14.32□□□□□ -0.12
SPTLC2-205ENST00000556607 SSFA2P28290 1259 aa14.31□□□□□ -0.12
SPTLC2-205ENST00000556607 ITPK1Q13572 414 aa14.31□□□□□ -0.12
SPTLC2-205ENST00000556607 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-205ENST00000556607 PER1O15534 1290 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-205ENST00000556607 DIAPH1O60610 1272 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-205ENST00000556607 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
SPTLC2-205ENST00000556607 SCN11AQ9UI33 1791 aa14.29□□□□□ -0.12
SPTLC2-205ENST00000556607 PTCD1O75127 700 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-205ENST00000556607 NFATC2IPQ8NCF5 419 aa14.29□□□□□ -0.12
SPTLC2-205ENST00000556607 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-205ENST00000556607 KDM6AO15550 1401 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-205ENST00000556607 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
SPTLC2-205ENST00000556607 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
SPTLC2-205ENST00000556607 KDRP35968 1356 aa14.27□□□□□ -0.12
SPTLC2-205ENST00000556607 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.13
SPTLC2-205ENST00000556607 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
SPTLC2-205ENST00000556607 COL5A3P25940 1745 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-205ENST00000556607 ZNF831Q5JPB2 1677 aa14.26□□□□□ -0.13
SPTLC2-205ENST00000556607 RFC4P35249 363 aa14.25□□□□□ -0.13
SPTLC2-205ENST00000556607 ZNF784Q8NCA9 323 aaPredicted RBP14.25□□□□□ -0.13
SPTLC2-205ENST00000556607 SLC4A9Q96Q91 983 aa14.25□□□□□ -0.13
SPTLC2-205ENST00000556607 LGR6Q9HBX8 967 aa14.25□□□□□ -0.13
SPTLC2-205ENST00000556607 CD2APQ9Y5K6 639 aa14.25□□□□□ -0.13
SPTLC2-205ENST00000556607 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
SPTLC2-205ENST00000556607 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 YBX3P16989 372 aaKnown RBP eCLIP14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 MTHFSDQ2M296 383 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 ARHGEF1Q92888 912 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 CFAP53Q96M91 514 aa14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 SLC52A2Q9HAB3 445 aa14.23□□□□□ -0.13
SPTLC2-205ENST00000556607 CNTNAP4Q9C0A0 1308 aa14.22□□□□□ -0.13
SPTLC2-205ENST00000556607 RPS6KA4O75676 772 aa14.22□□□□□ -0.13
SPTLC2-205ENST00000556607 MMP10P09238 476 aa14.22□□□□□ -0.13
SPTLC2-205ENST00000556607 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-205ENST00000556607 NPC1L1Q9UHC9 1359 aa14.22□□□□□ -0.13
SPTLC2-205ENST00000556607 ADRA2BP18089 450 aa14.21□□□□□ -0.13
SPTLC2-205ENST00000556607 CRKLP46109 303 aaKnown RBP14.21□□□□□ -0.13
SPTLC2-205ENST00000556607 SLC39A6Q13433 755 aa14.21□□□□□ -0.13
SPTLC2-205ENST00000556607 NLGN1Q8N2Q7 840 aa14.21□□□□□ -0.13
SPTLC2-205ENST00000556607 TJP1Q07157 1748 aa14.21□□□□□ -0.14
SPTLC2-205ENST00000556607 C4AP0C0L4 1744 aa14.2□□□□□ -0.14
SPTLC2-205ENST00000556607 NUDCQ9Y266 331 aa14.19□□□□□ -0.14
SPTLC2-205ENST00000556607 PARP3Q9Y6F1 533 aa14.19□□□□□ -0.14
SPTLC2-205ENST00000556607 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
SPTLC2-205ENST00000556607 CICQ96RK0 1608 aaPredicted RBP14.19□□□□□ -0.14
SPTLC2-205ENST00000556607 GYS1P13807 737 aa14.18□□□□□ -0.14
SPTLC2-205ENST00000556607 TEFQ10587 303 aa14.18□□□□□ -0.14
SPTLC2-205ENST00000556607 DNAJC10Q8IXB1 793 aa14.18□□□□□ -0.14
SPTLC2-205ENST00000556607 TTC5Q8N0Z6 440 aa14.18□□□□□ -0.14
SPTLC2-205ENST00000556607 GAS2L2Q8NHY3 880 aa14.18□□□□□ -0.14
SPTLC2-205ENST00000556607 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-205ENST00000556607 GNAT3A8MTJ3 354 aa14.17□□□□□ -0.14
SPTLC2-205ENST00000556607 CCDC87Q9NVE4 849 aa14.17□□□□□ -0.14
SPTLC2-205ENST00000556607 SRP68Q9UHB9 627 aaKnown RBP14.17□□□□□ -0.14
SPTLC2-205ENST00000556607 ZPR1O75312 459 aa14.16□□□□□ -0.14
SPTLC2-205ENST00000556607 MRC1P22897 1456 aa14.16□□□□□ -0.14
SPTLC2-205ENST00000556607 UTRNP46939 3433 aa14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 PPP2R1AP30153 589 aa14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 INTS5Q6P9B9 1019 aaKnown RBP14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
SPTLC2-205ENST00000556607 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
SPTLC2-205ENST00000556607 A0A0G2JLW4 131 aa14.14□□□□□ -0.15
SPTLC2-205ENST00000556607 TGFB2P61812 414 aa14.14□□□□□ -0.15
SPTLC2-205ENST00000556607 USPL1Q5W0Q7 1092 aa14.14□□□□□ -0.15
SPTLC2-205ENST00000556607 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
SPTLC2-205ENST00000556607 USP42Q9H9J4 1324 aaKnown RBP14.14□□□□□ -0.15
SPTLC2-205ENST00000556607 GIGYF1O75420 1035 aaPredicted RBP14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 CYP19A1P11511 503 aaPredicted RBP14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 FKBP8Q14318 412 aa14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 ZNF330Q9Y3S2 320 aaPredicted RBP14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 KCPQ6ZWJ8 1503 aa14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 UBR2Q8IWV8 1755 aa14.13□□□□□ -0.15
SPTLC2-205ENST00000556607 IL17REQ8NFR9 667 aa14.12□□□□□ -0.15
SPTLC2-205ENST00000556607 ZNF526Q8TF50 670 aaPredicted RBP14.12□□□□□ -0.15
SPTLC2-205ENST00000556607 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
SPTLC2-205ENST00000556607 PHACTR3Q96KR7 559 aa14.12□□□□□ -0.15
SPTLC2-205ENST00000556607 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
SPTLC2-205ENST00000556607 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
SPTLC2-205ENST00000556607 COL15A1P39059 1388 aa14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 STARD3NLO95772 234 aa14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 NEFMP07197 916 aa14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 DPEP1P16444 411 aa14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms