RNA–Protein interactions for RNA: ENST00000556600.1

NUMB-221, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-221ENST00000556600 KDM6AO15550 1401 aaPredicted RBP28.57■■■□□ 2.16
NUMB-221ENST00000556600 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
NUMB-221ENST00000556600 ERVV-2B6SEH9 535 aa28.55■■■□□ 2.16
NUMB-221ENST00000556600 YBX3P16989 372 aaKnown RBP eCLIP28.55■■■□□ 2.16
NUMB-221ENST00000556600 SSFA2P28290 1259 aa28.55■■■□□ 2.16
NUMB-221ENST00000556600 ATP6V1AP38606 617 aa28.55■■■□□ 2.16
NUMB-221ENST00000556600 PLEKHO1Q53GL0 409 aaPredicted RBP28.55■■■□□ 2.16
NUMB-221ENST00000556600 DCAF5Q96JK2 942 aa28.55■■■□□ 2.16
NUMB-221ENST00000556600 SLC4A9Q96Q91 983 aa28.54■■■□□ 2.16
NUMB-221ENST00000556600 HSP90AB1P08238 724 aaKnown RBP28.53■■■□□ 2.16
NUMB-221ENST00000556600 IL13P35225 146 aa28.53■■■□□ 2.16
NUMB-221ENST00000556600 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
NUMB-221ENST00000556600 AMOTQ4VCS5 1084 aa28.52■■■□□ 2.16
NUMB-221ENST00000556600 CD2APQ9Y5K6 639 aa28.52■■■□□ 2.16
NUMB-221ENST00000556600 GNPATO15228 680 aa28.51■■■□□ 2.15
NUMB-221ENST00000556600 SULT6B1Q6IMI4 303 aa28.5■■■□□ 2.15
NUMB-221ENST00000556600 PER1O15534 1290 aaPredicted RBP28.47■■■□□ 2.15
NUMB-221ENST00000556600 ZNF831Q5JPB2 1677 aa28.47■■■□□ 2.15
NUMB-221ENST00000556600 MTHFSP49914 203 aa28.45■■■□□ 2.14
NUMB-221ENST00000556600 CABP4P57796 275 aa28.45■■■□□ 2.14
NUMB-221ENST00000556600 RBM42Q9BTD8 480 aaKnown RBP28.45■■■□□ 2.14
NUMB-221ENST00000556600 GRIN3BO60391 1043 aa28.44■■■□□ 2.14
NUMB-221ENST00000556600 C1orf141Q5JVX7 400 aa28.43■■■□□ 2.14
NUMB-221ENST00000556600 COL5A3P25940 1745 aaPredicted RBP28.42■■■□□ 2.14
NUMB-221ENST00000556600 CNTNAP4Q9C0A0 1308 aa28.42■■■□□ 2.14
NUMB-221ENST00000556600 RC3H1Q5TC82 1133 aaKnown RBP28.4■■■□□ 2.14
NUMB-221ENST00000556600 NFATC2IPQ8NCF5 419 aa28.4■■■□□ 2.14
NUMB-221ENST00000556600 RTCBQ9Y3I0 505 aaKnown RBP28.4■■■□□ 2.14
NUMB-221ENST00000556600 TRAPPC3LQ5T215 181 aa28.38■■■□□ 2.13
NUMB-221ENST00000556600 PTCD1O75127 700 aaKnown RBP28.37■■■□□ 2.13
NUMB-221ENST00000556600 MMP10P09238 476 aa28.37■■■□□ 2.13
NUMB-221ENST00000556600 CC2D1BQ5T0F9 858 aaKnown RBP28.37■■■□□ 2.13
NUMB-221ENST00000556600 ARHGEF1Q92888 912 aaKnown RBP28.37■■■□□ 2.13
NUMB-221ENST00000556600 RPS6KA4O75676 772 aa28.36■■■□□ 2.13
NUMB-221ENST00000556600 ADRA2BP18089 450 aa28.36■■■□□ 2.13
NUMB-221ENST00000556600 HMOX1P09601 288 aa28.35■■■□□ 2.13
NUMB-221ENST00000556600 AKAP4Q5JQC9 854 aa28.35■■■□□ 2.13
NUMB-221ENST00000556600 MYH14Q7Z406 1995 aaKnown RBP28.35■■■□□ 2.13
NUMB-221ENST00000556600 SCN11AQ9UI33 1791 aa28.34■■■□□ 2.13
NUMB-221ENST00000556600 LGR6Q9HBX8 967 aa28.33■■■□□ 2.13
NUMB-221ENST00000556600 WWC3Q9ULE0 1092 aa28.33■■■□□ 2.13
NUMB-221ENST00000556600 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
NUMB-221ENST00000556600 GYS1P13807 737 aa28.32■■■□□ 2.12
NUMB-221ENST00000556600 C1QTNF8P60827 252 aa28.32■■■□□ 2.12
NUMB-221ENST00000556600 NLGN1Q8N2Q7 840 aa28.32■■■□□ 2.12
NUMB-221ENST00000556600 NPC1L1Q9UHC9 1359 aa28.32■■■□□ 2.12
NUMB-221ENST00000556600 TJP1Q07157 1748 aa28.32■■■□□ 2.12
NUMB-221ENST00000556600 CRKLP46109 303 aaKnown RBP28.31■■■□□ 2.12
NUMB-221ENST00000556600 SLC52A2Q9HAB3 445 aa28.31■■■□□ 2.12
NUMB-221ENST00000556600 MRC1P22897 1456 aa28.31■■■□□ 2.12
NUMB-221ENST00000556600 C4AP0C0L4 1744 aa28.3■■■□□ 2.12
NUMB-221ENST00000556600 COL3A1P02461 1466 aaPredicted RBP28.3■■■□□ 2.12
NUMB-221ENST00000556600 DIAPH1O60610 1272 aaKnown RBP28.3■■■□□ 2.12
NUMB-221ENST00000556600 PXDNLA1KZ92 1463 aa28.29■■■□□ 2.12
NUMB-221ENST00000556600 RFC4P35249 363 aa28.29■■■□□ 2.12
NUMB-221ENST00000556600 C10orf71Q711Q0 1435 aa28.28■■■□□ 2.12
NUMB-221ENST00000556600 KIF13BQ9NQT8 1826 aa28.28■■■□□ 2.12
NUMB-221ENST00000556600 RNMTO43148 476 aaKnown RBP28.28■■■□□ 2.12
NUMB-221ENST00000556600 MTHFSDQ2M296 383 aaKnown RBP28.28■■■□□ 2.12
NUMB-221ENST00000556600 KIAA1551Q9HCM1 1747 aa28.28■■■□□ 2.12
NUMB-221ENST00000556600 ADCY9O60503 1353 aa28.27■■■□□ 2.12
NUMB-221ENST00000556600 ATP10DQ9P241 1426 aa28.26■■■□□ 2.12
NUMB-221ENST00000556600 ADAMTS7Q9UKP4 1686 aa28.26■■■□□ 2.12
NUMB-221ENST00000556600 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
NUMB-221ENST00000556600 GIGYF1O75420 1035 aaPredicted RBP28.25■■■□□ 2.11
NUMB-221ENST00000556600 SLC39A6Q13433 755 aa28.24■■■□□ 2.11
NUMB-221ENST00000556600 SRP68Q9UHB9 627 aaKnown RBP28.24■■■□□ 2.11
NUMB-221ENST00000556600 USP42Q9H9J4 1324 aaKnown RBP28.23■■■□□ 2.11
NUMB-221ENST00000556600 DNAJC10Q8IXB1 793 aa28.23■■■□□ 2.11
NUMB-221ENST00000556600 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
NUMB-221ENST00000556600 TGFB2P61812 414 aa28.22■■■□□ 2.11
NUMB-221ENST00000556600 CNGB1Q14028 1251 aaPredicted RBP28.22■■■□□ 2.11
NUMB-221ENST00000556600 FKBP8Q14318 412 aa28.21■■■□□ 2.11
NUMB-221ENST00000556600 A0A0G2JLW4 131 aa28.2■■■□□ 2.1
NUMB-221ENST00000556600 CCDC87Q9NVE4 849 aa28.2■■■□□ 2.1
NUMB-221ENST00000556600 PARP3Q9Y6F1 533 aa28.19■■■□□ 2.1
NUMB-221ENST00000556600 N4BP2Q86UW6 1770 aaPredicted RBP28.19■■■□□ 2.1
NUMB-221ENST00000556600 SENP3-EIF4A1A0A087X0R7 540 aa28.18■■■□□ 2.1
NUMB-221ENST00000556600 CYP19A1P11511 503 aaPredicted RBP28.18■■■□□ 2.1
NUMB-221ENST00000556600 DDR1Q08345 913 aa28.18■■■□□ 2.1
NUMB-221ENST00000556600 VIRMAQ69YN4 1812 aaKnown RBP28.18■■■□□ 2.1
NUMB-221ENST00000556600 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
NUMB-221ENST00000556600 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
NUMB-221ENST00000556600 DPEP1P16444 411 aa28.16■■■□□ 2.1
NUMB-221ENST00000556600 KCNA3P22001 575 aa28.14■■■□□ 2.1
NUMB-221ENST00000556600 BCS1LQ9Y276 419 aa28.14■■■□□ 2.1
NUMB-221ENST00000556600 ZBTB1Q9Y2K1 713 aa28.13■■■□□ 2.09
NUMB-221ENST00000556600 UBR2Q8IWV8 1755 aa28.12■■■□□ 2.09
NUMB-221ENST00000556600 TM4SF1P30408 202 aa28.12■■■□□ 2.09
NUMB-221ENST00000556600 VSIG10Q8N0Z9 540 aa28.12■■■□□ 2.09
NUMB-221ENST00000556600 IL17REQ8NFR9 667 aa28.12■■■□□ 2.09
NUMB-221ENST00000556600 GPBP1L1Q9HC44 474 aaPredicted RBP28.12■■■□□ 2.09
NUMB-221ENST00000556600 BRCA1P38398 1863 aaKnown RBP28.11■■■□□ 2.09
NUMB-221ENST00000556600 POLRMTO00411 1230 aaKnown RBP28.11■■■□□ 2.09
NUMB-221ENST00000556600 USPL1Q5W0Q7 1092 aa28.11■■■□□ 2.09
NUMB-221ENST00000556600 ZNF526Q8TF50 670 aaPredicted RBP28.11■■■□□ 2.09
NUMB-221ENST00000556600 GAS2L2Q8NHY3 880 aa28.1■■■□□ 2.09
NUMB-221ENST00000556600 COL15A1P39059 1388 aa28.09■■■□□ 2.09
NUMB-221ENST00000556600 GNAT3A8MTJ3 354 aa28.08■■■□□ 2.09
NUMB-221ENST00000556600 ZPR1O75312 459 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms