RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 CNTNAP3BQ96NU0 1288 aa6.08□□□□□ -1.44
TGFB3-205ENST00000556507 COL25A1Q9BXS0 654 aaPredicted RBP6.08□□□□□ -1.44
TGFB3-205ENST00000556507 CNTNAP3Q9BZ76 1288 aa6.08□□□□□ -1.44
TGFB3-205ENST00000556507 NCAPD3P42695 1498 aa6.08□□□□□ -1.44
TGFB3-205ENST00000556507 SPATA31C2B4DYI2 1134 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
TGFB3-205ENST00000556507 WDR44Q5JSH3 913 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 NBPF10Q6P3W6 841 aaKnown RBP6.07□□□□□ -1.44
TGFB3-205ENST00000556507 RIPOR1Q6ZS17 1223 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 TAS1R3Q7RTX0 852 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 NBPF15Q8N660 670 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 ZSCAN10Q96SZ4 725 aaPredicted RBP6.07□□□□□ -1.44
TGFB3-205ENST00000556507 GAS2L1Q99501 681 aaPredicted RBP6.07□□□□□ -1.44
TGFB3-205ENST00000556507 ALG2Q9H553 416 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 CUEDC1Q9NWM3 386 aaPredicted RBP6.07□□□□□ -1.44
TGFB3-205ENST00000556507 DYRK1BQ9Y463 629 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 GOLGA3Q08378 1498 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 CEP162Q5TB80 1403 aa6.07□□□□□ -1.44
TGFB3-205ENST00000556507 PIK3CDO00329 1044 aa6.06□□□□□ -1.44
TGFB3-205ENST00000556507 WASLO00401 505 aaPredicted RBP6.06□□□□□ -1.44
TGFB3-205ENST00000556507 STAU1O95793 577 aaKnown RBP6.06□□□□□ -1.44
TGFB3-205ENST00000556507 SKIP12755 728 aa6.06□□□□□ -1.44
TGFB3-205ENST00000556507 KRT76Q01546 638 aa6.06□□□□□ -1.44
TGFB3-205ENST00000556507 TIMMDC1Q9NPL8 285 aa6.06□□□□□ -1.44
TGFB3-205ENST00000556507 HRH3Q9Y5N1 445 aa6.06□□□□□ -1.44
TGFB3-205ENST00000556507 RUSC2Q8N2Y8 1516 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 CEP164Q9UPV0 1460 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 GNASQ5JWF2 1037 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 RNFT1Q5M7Z0 435 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 TMEM214Q6NUQ4 689 aaKnown RBP6.05□□□□□ -1.44
TGFB3-205ENST00000556507 TRIM22Q8IYM9 498 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 GMCL1Q96IK5 515 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 ETNK1Q9HBU6 452 aa6.05□□□□□ -1.44
TGFB3-205ENST00000556507 HMGXB3Q12766 1538 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 POM121CA8CG34 1229 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 H7C1W4 665 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 LZTS3O60299 673 aaPredicted RBP6.04□□□□□ -1.44
TGFB3-205ENST00000556507 PHKA2P46019 1235 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 GDF10P55107 478 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 TLR1Q15399 786 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 DBN1Q16643 649 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 EML3Q32P44 896 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 FOXR1Q6PIV2 292 aa6.04□□□□□ -1.44
TGFB3-205ENST00000556507 ZNF837Q96EG3 531 aaPredicted RBP6.04□□□□□ -1.44
TGFB3-205ENST00000556507 FHDC1Q9C0D6 1143 aaPredicted RBP6.04□□□□□ -1.44
TGFB3-205ENST00000556507 KIF21BO75037 1637 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 SYNJ1O43426 1573 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 F11P03951 625 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 INHAP05111 366 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 SCNN1DP51172 638 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 HDGFL1Q5TGJ6 251 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 NFATC2IPQ8NCF5 419 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 CLUAP1Q96AJ1 413 aa6.03□□□□□ -1.44
TGFB3-205ENST00000556507 NCOA4Q13772 614 aa6.02□□□□□ -1.45
TGFB3-205ENST00000556507 C4orf17Q53FE4 359 aa6.02□□□□□ -1.45
TGFB3-205ENST00000556507 RHBDD1Q8TEB9 315 aa6.02□□□□□ -1.45
TGFB3-205ENST00000556507 TIMELESSQ9UNS1 1208 aa6.02□□□□□ -1.45
TGFB3-205ENST00000556507 NOD1Q9Y239 953 aa6.02□□□□□ -1.45
TGFB3-205ENST00000556507 TOP2BQ02880 1626 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 A0A1B0GTH6 734 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 USP17L5A8MUK1 530 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 GPR25O00155 361 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 DEPDC4Q8N2C3 294 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 CCER1Q8TC90 406 aaPredicted RBP6.01□□□□□ -1.45
TGFB3-205ENST00000556507 ADAMTS19Q8TE59 1207 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 GTPBP3Q969Y2 492 aaKnown RBP6.01□□□□□ -1.45
TGFB3-205ENST00000556507 TRERF1Q96PN7 1200 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 GPAMQ9HCL2 828 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 SERTAD1Q9UHV2 236 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 PCDHGA11Q9Y5H2 935 aa6.01□□□□□ -1.45
TGFB3-205ENST00000556507 SMTNP53814 917 aa6□□□□□ -1.45
TGFB3-205ENST00000556507 GTF2IP78347 998 aa6□□□□□ -1.45
TGFB3-205ENST00000556507 PSME1Q06323 249 aa6□□□□□ -1.45
TGFB3-205ENST00000556507 GAS6Q14393 721 aa6□□□□□ -1.45
TGFB3-205ENST00000556507 PROSER2Q86WR7 435 aaPredicted RBP6□□□□□ -1.45
TGFB3-205ENST00000556507 NUCKS1Q9H1E3 243 aaKnown RBP6□□□□□ -1.45
TGFB3-205ENST00000556507 BIVM-ERCC5R4GMW8 1640 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 CFTRP13569 1480 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 TMEM229AB2RXF0 380 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 SLURP2P0DP57 97 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 CSB-PGBD3P0DP91 1061 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 SRSF11Q05519 484 aaKnown RBP5.99□□□□□ -1.45
TGFB3-205ENST00000556507 TBC1D9Q6ZT07 1266 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 PGBD3Q8N328 593 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 FNBP4Q8N3X1 1017 aaPredicted RBP5.99□□□□□ -1.45
TGFB3-205ENST00000556507 SLC4A9Q96Q91 983 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 CLIP1P30622 1438 aa5.99□□□□□ -1.45
TGFB3-205ENST00000556507 A6NJY4 79 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 BACH1O14867 736 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 MSX1P28360 303 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 PLA2G4AP47712 749 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 ZNF385CQ66K41 422 aaPredicted RBP5.98□□□□□ -1.45
TGFB3-205ENST00000556507 SVOPQ8N4V2 548 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 UCN2Q96RP3 112 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 NIFKQ9BYG3 293 aaKnown RBP5.98□□□□□ -1.45
TGFB3-205ENST00000556507 RUBCNLQ9H714 662 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 MBIPQ9NS73 344 aa5.98□□□□□ -1.45
TGFB3-205ENST00000556507 USP17L3A6NCW0 530 aa5.97□□□□□ -1.45
TGFB3-205ENST00000556507 USP17L4A6NCW7 530 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms