RNA–Protein interactions for RNA: ENST00000556479.5

LINC00640-203, long intergenic non-protein coding RNA 640, humanhuman

TSL 2 BASIC

Gene LINC00640, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-203ENST00000556479 RNF144AP50876 292 aaPredicted RBP7.58□□□□□ -1.2
LINC00640-203ENST00000556479 PSME1Q06323 249 aa7.58□□□□□ -1.2
LINC00640-203ENST00000556479 ANKMY2Q8IV38 441 aa7.58□□□□□ -1.2
LINC00640-203ENST00000556479 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00640-203ENST00000556479 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
LINC00640-203ENST00000556479 GMPR2Q9P2T1 348 aaKnown RBP7.58□□□□□ -1.2
LINC00640-203ENST00000556479 GPC1P35052 558 aa7.57□□□□□ -1.2
LINC00640-203ENST00000556479 CENPCQ03188 943 aa7.57□□□□□ -1.2
LINC00640-203ENST00000556479 DPYDQ12882 1025 aa7.57□□□□□ -1.2
LINC00640-203ENST00000556479 FOXD4L5Q5VV16 416 aaPredicted RBP7.57□□□□□ -1.2
LINC00640-203ENST00000556479 FHDC1Q9C0D6 1143 aaPredicted RBP7.57□□□□□ -1.2
LINC00640-203ENST00000556479 GRIP2Q9C0E4 1043 aa7.57□□□□□ -1.2
LINC00640-203ENST00000556479 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
LINC00640-203ENST00000556479 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
LINC00640-203ENST00000556479 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 POTECB2RU33 542 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 M0R2N6 131 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 SEC13P55735 322 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 TRIM47Q96LD4 638 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 SENP2Q9HC62 589 aa7.56□□□□□ -1.2
LINC00640-203ENST00000556479 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
LINC00640-203ENST00000556479 TTLL8A6PVC2 850 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 BACH1O14867 736 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 SMTNP53814 917 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 EPHA4P54764 986 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 MTFR1Q15390 333 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 POLMQ9NP87 494 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-203ENST00000556479 SERTAD1Q9UHV2 236 aa7.55□□□□□ -1.2
LINC00640-203ENST00000556479 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
LINC00640-203ENST00000556479 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
LINC00640-203ENST00000556479 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
LINC00640-203ENST00000556479 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
LINC00640-203ENST00000556479 ACIN1Q9UKV3 1341 aaKnown RBP7.53□□□□□ -1.2
LINC00640-203ENST00000556479 A6NJY4 79 aa7.53□□□□□ -1.2
LINC00640-203ENST00000556479 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
LINC00640-203ENST00000556479 SNRPBP14678 240 aaKnown RBP7.53□□□□□ -1.2
LINC00640-203ENST00000556479 FAM69CQ0P6D2 419 aa7.53□□□□□ -1.2
LINC00640-203ENST00000556479 TNS4Q8IZW8 715 aa7.53□□□□□ -1.2
LINC00640-203ENST00000556479 ZNF295-AS1Q8N0V1 137 aa7.53□□□□□ -1.2
LINC00640-203ENST00000556479 IQSEC3Q9UPP2 1182 aaPredicted RBP7.53□□□□□ -1.2
LINC00640-203ENST00000556479 CDK2AP1O14519 115 aa7.52□□□□□ -1.21
LINC00640-203ENST00000556479 FOXK2Q01167 660 aa7.52□□□□□ -1.21
LINC00640-203ENST00000556479 TLR1Q15399 786 aa7.52□□□□□ -1.21
LINC00640-203ENST00000556479 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
LINC00640-203ENST00000556479 PPARGC1BQ86YN6 1023 aaKnown RBP7.52□□□□□ -1.21
LINC00640-203ENST00000556479 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
LINC00640-203ENST00000556479 RBM19Q9Y4C8 960 aaKnown RBP7.52□□□□□ -1.21
LINC00640-203ENST00000556479 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
LINC00640-203ENST00000556479 SPATA31C2B4DYI2 1134 aa7.51□□□□□ -1.21
LINC00640-203ENST00000556479 C11orf95C9JLR9 678 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-203ENST00000556479 SLC27A3Q5K4L6 730 aa7.51□□□□□ -1.21
LINC00640-203ENST00000556479 LYSMD3Q7Z3D4 306 aa7.51□□□□□ -1.21
LINC00640-203ENST00000556479 ZSCAN10Q96SZ4 725 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-203ENST00000556479 SCHIP1Q9P0W5 487 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-203ENST00000556479 USP3Q9Y6I4 520 aa7.51□□□□□ -1.21
LINC00640-203ENST00000556479 MAN1A2O60476 641 aa7.5□□□□□ -1.21
LINC00640-203ENST00000556479 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
LINC00640-203ENST00000556479 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
LINC00640-203ENST00000556479 POU4F2Q12837 409 aa7.49□□□□□ -1.21
LINC00640-203ENST00000556479 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
LINC00640-203ENST00000556479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.49□□□□□ -1.21
LINC00640-203ENST00000556479 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
LINC00640-203ENST00000556479 C21orf2O43822 256 aa7.48□□□□□ -1.21
LINC00640-203ENST00000556479 NBPF10Q6P3W6 841 aaKnown RBP7.48□□□□□ -1.21
LINC00640-203ENST00000556479 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
LINC00640-203ENST00000556479 NBPF15Q8N660 670 aa7.48□□□□□ -1.21
LINC00640-203ENST00000556479 HINFPQ9BQA5 517 aa7.48□□□□□ -1.21
LINC00640-203ENST00000556479 TSPAN10Q9H1Z9 355 aaPredicted RBP7.48□□□□□ -1.21
LINC00640-203ENST00000556479 SLAIN2Q9P270 581 aa7.48□□□□□ -1.21
LINC00640-203ENST00000556479 LGR5O75473 907 aa7.47□□□□□ -1.21
LINC00640-203ENST00000556479 RHOQP17081 205 aa7.47□□□□□ -1.21
LINC00640-203ENST00000556479 WEE1P30291 646 aa7.47□□□□□ -1.21
LINC00640-203ENST00000556479 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
LINC00640-203ENST00000556479 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
LINC00640-203ENST00000556479 TMEM214Q6NUQ4 689 aaKnown RBP7.47□□□□□ -1.21
LINC00640-203ENST00000556479 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
LINC00640-203ENST00000556479 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.21
LINC00640-203ENST00000556479 SENP3-EIF4A1A0A087X0R7 540 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 CSB-PGBD3P0DP91 1061 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 OCLNQ16625 522 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 GNASQ5JWF2 1037 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 TBCELQ5QJ74 424 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 POTEAQ6S8J7 498 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 TAS1R3Q7RTX0 852 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 ZDHHC1Q8WTX9 485 aa7.46□□□□□ -1.22
LINC00640-203ENST00000556479 CLP1Q92989 425 aaKnown RBP7.46□□□□□ -1.22
LINC00640-203ENST00000556479 NIFKQ9BYG3 293 aaKnown RBP7.46□□□□□ -1.22
LINC00640-203ENST00000556479 SLC35F4A4IF30 521 aa7.45□□□□□ -1.22
LINC00640-203ENST00000556479 CARNS1A5YM72 827 aa7.45□□□□□ -1.22
LINC00640-203ENST00000556479 IGFBP4P22692 258 aa7.45□□□□□ -1.22
LINC00640-203ENST00000556479 PTSQ03393 145 aa7.45□□□□□ -1.22
LINC00640-203ENST00000556479 TEAD4Q15561 434 aa7.45□□□□□ -1.22
LINC00640-203ENST00000556479 SCG3Q8WXD2 468 aaKnown RBP7.45□□□□□ -1.22
LINC00640-203ENST00000556479 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
LINC00640-203ENST00000556479 GTF2E1P29083 439 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-203ENST00000556479 STAG2Q8N3U4 1231 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms