RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NKX1-1Q15270 411 aaPredicted RBP19.44■□□□□ 0.7
ACTN1-219ENST00000556432 N4BP2Q86UW6 1770 aaPredicted RBP19.44■□□□□ 0.7
ACTN1-219ENST00000556432 MAP2P11137 1827 aaKnown RBP19.44■□□□□ 0.7
ACTN1-219ENST00000556432 TMF1P82094 1093 aa19.43■□□□□ 0.7
ACTN1-219ENST00000556432 CCDC87Q9NVE4 849 aa19.43■□□□□ 0.7
ACTN1-219ENST00000556432 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
ACTN1-219ENST00000556432 TRAPPC3LQ5T215 181 aa19.42■□□□□ 0.7
ACTN1-219ENST00000556432 NLGN1Q8N2Q7 840 aa19.42■□□□□ 0.7
ACTN1-219ENST00000556432 C10orf71Q711Q0 1435 aa19.42■□□□□ 0.7
ACTN1-219ENST00000556432 DPEP1P16444 411 aa19.41■□□□□ 0.7
ACTN1-219ENST00000556432 CAPN15O75808 1086 aa19.4■□□□□ 0.7
ACTN1-219ENST00000556432 HTRA3P83110 453 aa19.4■□□□□ 0.7
ACTN1-219ENST00000556432 C9orf131Q5VYM1 1079 aa19.4■□□□□ 0.7
ACTN1-219ENST00000556432 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
ACTN1-219ENST00000556432 RBM46Q8TBY0 533 aaKnown RBP19.4■□□□□ 0.7
ACTN1-219ENST00000556432 PARP3Q9Y6F1 533 aa19.4■□□□□ 0.7
ACTN1-219ENST00000556432 WDR90Q96KV7 1748 aa19.39■□□□□ 0.7
ACTN1-219ENST00000556432 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.7
ACTN1-219ENST00000556432 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
ACTN1-219ENST00000556432 ATG3Q9NT62 314 aa19.39■□□□□ 0.69
ACTN1-219ENST00000556432 KIAA1551Q9HCM1 1747 aa19.39■□□□□ 0.69
ACTN1-219ENST00000556432 PHKG2P15735 406 aa19.38■□□□□ 0.69
ACTN1-219ENST00000556432 RFC4P35249 363 aa19.38■□□□□ 0.69
ACTN1-219ENST00000556432 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
ACTN1-219ENST00000556432 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
ACTN1-219ENST00000556432 NCAPD2Q15021 1401 aa19.37■□□□□ 0.69
ACTN1-219ENST00000556432 ARHGEF1Q92888 912 aaKnown RBP19.37■□□□□ 0.69
ACTN1-219ENST00000556432 EYA1Q99502 592 aa19.37■□□□□ 0.69
ACTN1-219ENST00000556432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.69
ACTN1-219ENST00000556432 KDM2BQ8NHM5 1336 aa19.36■□□□□ 0.69
ACTN1-219ENST00000556432 ADRA2BP18089 450 aa19.36■□□□□ 0.69
ACTN1-219ENST00000556432 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
ACTN1-219ENST00000556432 COL13A1Q5TAT6 717 aaPredicted RBP19.36■□□□□ 0.69
ACTN1-219ENST00000556432 C4AP0C0L4 1744 aa19.35■□□□□ 0.69
ACTN1-219ENST00000556432 GYS1P13807 737 aa19.35■□□□□ 0.69
ACTN1-219ENST00000556432 FSTL1Q12841 308 aa19.35■□□□□ 0.69
ACTN1-219ENST00000556432 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
ACTN1-219ENST00000556432 KDRP35968 1356 aa19.34■□□□□ 0.69
ACTN1-219ENST00000556432 PIM2Q9P1W9 311 aa19.34■□□□□ 0.69
ACTN1-219ENST00000556432 KCPQ6ZWJ8 1503 aa19.34■□□□□ 0.69
ACTN1-219ENST00000556432 WASHC2AQ641Q2 1341 aa19.33■□□□□ 0.69
ACTN1-219ENST00000556432 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
ACTN1-219ENST00000556432 TNS4Q8IZW8 715 aa19.33■□□□□ 0.68
ACTN1-219ENST00000556432 CNTNAP4Q9C0A0 1308 aa19.32■□□□□ 0.68
ACTN1-219ENST00000556432 RC3H1Q5TC82 1133 aaKnown RBP19.32■□□□□ 0.68
ACTN1-219ENST00000556432 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
ACTN1-219ENST00000556432 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
ACTN1-219ENST00000556432 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
ACTN1-219ENST00000556432 SLC4A9Q96Q91 983 aa19.31■□□□□ 0.68
ACTN1-219ENST00000556432 RRAGCQ9HB90 399 aa19.31■□□□□ 0.68
ACTN1-219ENST00000556432 BRCA1P38398 1863 aaKnown RBP19.3■□□□□ 0.68
ACTN1-219ENST00000556432 ANKRD26Q9UPS8 1709 aa19.29■□□□□ 0.68
ACTN1-219ENST00000556432 ERVV-2B6SEH9 535 aa19.29■□□□□ 0.68
ACTN1-219ENST00000556432 HSP90AB1P08238 724 aaKnown RBP19.29■□□□□ 0.68
ACTN1-219ENST00000556432 KCNA3P22001 575 aa19.29■□□□□ 0.68
ACTN1-219ENST00000556432 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
ACTN1-219ENST00000556432 ARFGEF1Q9Y6D6 1849 aa19.28■□□□□ 0.68
ACTN1-219ENST00000556432 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
ACTN1-219ENST00000556432 CABP4P57796 275 aa19.28■□□□□ 0.68
ACTN1-219ENST00000556432 SMC1BQ8NDV3 1235 aa19.28■□□□□ 0.68
ACTN1-219ENST00000556432 SRP68Q9UHB9 627 aaKnown RBP19.28■□□□□ 0.68
ACTN1-219ENST00000556432 PTCD1O75127 700 aaKnown RBP19.27■□□□□ 0.68
ACTN1-219ENST00000556432 CHRNA5P30532 468 aa19.27■□□□□ 0.68
ACTN1-219ENST00000556432 EIF4A2Q14240 407 aaKnown RBP19.27■□□□□ 0.68
ACTN1-219ENST00000556432 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
ACTN1-219ENST00000556432 COL5A3P25940 1745 aaPredicted RBP19.26■□□□□ 0.67
ACTN1-219ENST00000556432 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
ACTN1-219ENST00000556432 ZNF831Q5JPB2 1677 aa19.25■□□□□ 0.67
ACTN1-219ENST00000556432 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
ACTN1-219ENST00000556432 FKBP8Q14318 412 aa19.25■□□□□ 0.67
ACTN1-219ENST00000556432 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
ACTN1-219ENST00000556432 DDR1Q08345 913 aa19.24■□□□□ 0.67
ACTN1-219ENST00000556432 PLEKHO1Q53GL0 409 aaPredicted RBP19.24■□□□□ 0.67
ACTN1-219ENST00000556432 PRELPP51888 382 aa19.23■□□□□ 0.67
ACTN1-219ENST00000556432 USP42Q9H9J4 1324 aaKnown RBP19.23■□□□□ 0.67
ACTN1-219ENST00000556432 RASSF7Q02833 373 aa19.22■□□□□ 0.67
ACTN1-219ENST00000556432 POLR3GLQ9BT43 218 aa19.22■□□□□ 0.67
ACTN1-219ENST00000556432 MYH14Q7Z406 1995 aaKnown RBP19.22■□□□□ 0.67
ACTN1-219ENST00000556432 PCNTO95613 3336 aa19.21■□□□□ 0.67
ACTN1-219ENST00000556432 KDM6AO15550 1401 aaPredicted RBP19.21■□□□□ 0.67
ACTN1-219ENST00000556432 MTHFSP49914 203 aa19.21■□□□□ 0.67
ACTN1-219ENST00000556432 C1orf141Q5JVX7 400 aa19.21■□□□□ 0.67
ACTN1-219ENST00000556432 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
ACTN1-219ENST00000556432 ZPR1O75312 459 aa19.19■□□□□ 0.66
ACTN1-219ENST00000556432 HSPA1AP0DMV8 641 aaKnown RBP19.19■□□□□ 0.66
ACTN1-219ENST00000556432 HSPA1BP0DMV9 641 aaKnown RBP19.19■□□□□ 0.66
ACTN1-219ENST00000556432 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
ACTN1-219ENST00000556432 VEGFAP15692 232 aaPredicted RBP19.18■□□□□ 0.66
ACTN1-219ENST00000556432 ZC3H4Q9UPT8 1303 aaKnown RBP19.18■□□□□ 0.66
ACTN1-219ENST00000556432 LMNB1P20700 586 aa19.17■□□□□ 0.66
ACTN1-219ENST00000556432 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
ACTN1-219ENST00000556432 SBF1O95248 1867 aa19.17■□□□□ 0.66
ACTN1-219ENST00000556432 USPL1Q5W0Q7 1092 aa19.16■□□□□ 0.66
ACTN1-219ENST00000556432 GLTPD2A6NH11 291 aa19.15■□□□□ 0.66
ACTN1-219ENST00000556432 TM4SF1P30408 202 aa19.14■□□□□ 0.65
ACTN1-219ENST00000556432 INTS5Q6P9B9 1019 aaKnown RBP19.14■□□□□ 0.65
ACTN1-219ENST00000556432 TJP1Q07157 1748 aa19.14■□□□□ 0.65
ACTN1-219ENST00000556432 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
ACTN1-219ENST00000556432 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
ACTN1-219ENST00000556432 TTLL6Q8N841 843 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms