RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ESYT1Q9BSJ8 1104 aa9.1□□□□□ -0.95
SCFD1-218ENST00000556256 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-218ENST00000556256 IL2RAP01589 272 aa9.09□□□□□ -0.95
SCFD1-218ENST00000556256 COL8A1P27658 744 aa9.09□□□□□ -0.95
SCFD1-218ENST00000556256 MKL2Q9ULH7 1088 aa9.09□□□□□ -0.95
SCFD1-218ENST00000556256 BAG6P46379 1132 aa9.08□□□□□ -0.96
SCFD1-218ENST00000556256 UBAP2LQ14157 1087 aaKnown RBP9.08□□□□□ -0.96
SCFD1-218ENST00000556256 PHF24Q9UPV7 400 aa9.08□□□□□ -0.96
SCFD1-218ENST00000556256 EDARADDQ8WWZ3 215 aa9.07□□□□□ -0.96
SCFD1-218ENST00000556256 RRAGCQ9HB90 399 aa9.07□□□□□ -0.96
SCFD1-218ENST00000556256 HRH3Q9Y5N1 445 aa9.07□□□□□ -0.96
SCFD1-218ENST00000556256 A0A1B0GTH6 734 aa9.06□□□□□ -0.96
SCFD1-218ENST00000556256 ZNF592Q92610 1267 aa9.06□□□□□ -0.96
SCFD1-218ENST00000556256 ZSCAN10Q96SZ4 725 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-218ENST00000556256 GDF2Q9UK05 429 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-218ENST00000556256 C2CD2LO14523 706 aa9.05□□□□□ -0.96
SCFD1-218ENST00000556256 LINC00114Q6XXX2 140 aa9.05□□□□□ -0.96
SCFD1-218ENST00000556256 ALYREFQ86V81 257 aaKnown RBP9.05□□□□□ -0.96
SCFD1-218ENST00000556256 XAGE2Q96GT9 111 aa9.05□□□□□ -0.96
SCFD1-218ENST00000556256 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-218ENST00000556256 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-218ENST00000556256 GPR37L1O60883 481 aa9.04□□□□□ -0.96
SCFD1-218ENST00000556256 FURINP09958 794 aa9.04□□□□□ -0.96
SCFD1-218ENST00000556256 HOXB4P17483 251 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-218ENST00000556256 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
SCFD1-218ENST00000556256 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-218ENST00000556256 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
SCFD1-218ENST00000556256 MSX1P28360 303 aa9.03□□□□□ -0.96
SCFD1-218ENST00000556256 LBRQ14739 615 aaKnown RBP9.03□□□□□ -0.96
SCFD1-218ENST00000556256 C4orf17Q53FE4 359 aa9.03□□□□□ -0.96
SCFD1-218ENST00000556256 TMEM214Q6NUQ4 689 aaKnown RBP9.03□□□□□ -0.96
SCFD1-218ENST00000556256 CSB-PGBD3P0DP91 1061 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 BMP4P12644 408 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 GNASQ5JWF2 1037 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 PGBD3Q8N328 593 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 ABHD17AQ96GS6 310 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 CCDC85AQ96PX6 553 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-218ENST00000556256 SUV39H2Q9H5I1 410 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
SCFD1-218ENST00000556256 ATXN7L1Q9ULK2 861 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-218ENST00000556256 MYCP01106 439 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-218ENST00000556256 CTBSQ01459 385 aa9.01□□□□□ -0.97
SCFD1-218ENST00000556256 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
SCFD1-218ENST00000556256 NDFIP2Q9NV92 336 aa9.01□□□□□ -0.97
SCFD1-218ENST00000556256 GGA1Q9UJY5 639 aa9.01□□□□□ -0.97
SCFD1-218ENST00000556256 BNIP3LO60238 219 aa9□□□□□ -0.97
SCFD1-218ENST00000556256 AMPD1P23109 780 aa9□□□□□ -0.97
SCFD1-218ENST00000556256 GTF2E1P29083 439 aaPredicted RBP9□□□□□ -0.97
SCFD1-218ENST00000556256 GRIN2CQ14957 1233 aa9□□□□□ -0.97
SCFD1-218ENST00000556256 EFHC2Q5JST6 749 aa9□□□□□ -0.97
SCFD1-218ENST00000556256 Q8N3U1 123 aa9□□□□□ -0.97
SCFD1-218ENST00000556256 FGFR3P22607 806 aa8.99□□□□□ -0.97
SCFD1-218ENST00000556256 SLCO4C1Q6ZQN7 724 aa8.99□□□□□ -0.97
SCFD1-218ENST00000556256 MTMR14Q8NCE2 650 aa8.99□□□□□ -0.97
SCFD1-218ENST00000556256 BTBD6Q96KE9 485 aa8.99□□□□□ -0.97
SCFD1-218ENST00000556256 TSGA10IPQ3SY00 556 aa8.98□□□□□ -0.97
SCFD1-218ENST00000556256 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
SCFD1-218ENST00000556256 BANK1Q8NDB2 785 aa8.98□□□□□ -0.97
SCFD1-218ENST00000556256 NDUFB9Q9Y6M9 179 aa8.98□□□□□ -0.97
SCFD1-218ENST00000556256 C1QTNF9BB2RNN3 333 aa8.97□□□□□ -0.97
SCFD1-218ENST00000556256 GNB5O14775 395 aa8.97□□□□□ -0.97
SCFD1-218ENST00000556256 STAU1O95793 577 aaKnown RBP8.97□□□□□ -0.97
SCFD1-218ENST00000556256 EPXP11678 715 aa8.97□□□□□ -0.97
SCFD1-218ENST00000556256 PPARGC1BQ86YN6 1023 aaKnown RBP8.97□□□□□ -0.97
SCFD1-218ENST00000556256 CRISPLD1Q9H336 500 aa8.97□□□□□ -0.97
SCFD1-218ENST00000556256 SOCS7O14512 581 aa8.96□□□□□ -0.98
SCFD1-218ENST00000556256 CD163Q86VB7 1156 aa8.96□□□□□ -0.98
SCFD1-218ENST00000556256 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
SCFD1-218ENST00000556256 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
SCFD1-218ENST00000556256 SNRKQ9NRH2 765 aa8.95□□□□□ -0.98
SCFD1-218ENST00000556256 PIK3R2O00459 728 aa8.94□□□□□ -0.98
SCFD1-218ENST00000556256 ARAFP10398 606 aa8.94□□□□□ -0.98
SCFD1-218ENST00000556256 USP4Q13107 963 aa8.94□□□□□ -0.98
SCFD1-218ENST00000556256 ZCCHC2Q9C0B9 1178 aaKnown RBP8.94□□□□□ -0.98
SCFD1-218ENST00000556256 NEURL1BA8MQ27 555 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 DGKGP49619 791 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 TLR1Q15399 786 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 RNF135Q8IUD6 432 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 PHTF2Q8N3S3 785 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 KRTAP4-8Q9BYQ9 185 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
SCFD1-218ENST00000556256 PCDHGC4Q9Y5F7 938 aa8.93□□□□□ -0.98
SCFD1-218ENST00000556256 CHRNA4P43681 627 aa8.91□□□□□ -0.98
SCFD1-218ENST00000556256 NEUROD2Q15784 382 aa8.91□□□□□ -0.98
SCFD1-218ENST00000556256 FIGNL1Q6PIW4 674 aa8.91□□□□□ -0.98
SCFD1-218ENST00000556256 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
SCFD1-218ENST00000556256 HCN2Q9UL51 889 aa8.91□□□□□ -0.98
SCFD1-218ENST00000556256 DOLKQ9UPQ8 538 aa8.91□□□□□ -0.98
SCFD1-218ENST00000556256 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
SCFD1-218ENST00000556256 NOP53Q9NZM5 478 aaKnown RBP8.9□□□□□ -0.98
SCFD1-218ENST00000556256 KLF15Q9UIH9 416 aa8.9□□□□□ -0.98
SCFD1-218ENST00000556256 ATP4AP20648 1035 aa8.89□□□□□ -0.99
SCFD1-218ENST00000556256 ITGB7P26010 798 aa8.89□□□□□ -0.99
SCFD1-218ENST00000556256 NLRP8Q86W28 1048 aa8.89□□□□□ -0.99
SCFD1-218ENST00000556256 APBB1O00213 710 aa8.88□□□□□ -0.99
SCFD1-218ENST00000556256 ATXN7O15265 892 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-218ENST00000556256 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
SCFD1-218ENST00000556256 C1orf216Q8TAB5 229 aa8.88□□□□□ -0.99
SCFD1-218ENST00000556256 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
SCFD1-218ENST00000556256 SCNN1DP51172 638 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms