RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
HIF1A-208ENST00000556237 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
HIF1A-208ENST00000556237 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
HIF1A-208ENST00000556237 TRPM2O94759 1503 aa8.9□□□□□ -0.99
HIF1A-208ENST00000556237 NOS1P29475 1434 aa8.89□□□□□ -0.99
HIF1A-208ENST00000556237 SPATA31E1Q6ZUB1 1445 aa8.89□□□□□ -0.99
HIF1A-208ENST00000556237 CNTLNQ9NXG0 1405 aa8.89□□□□□ -0.99
HIF1A-208ENST00000556237 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
HIF1A-208ENST00000556237 GIGYF2Q6Y7W6 1299 aaKnown RBP8.89□□□□□ -0.99
HIF1A-208ENST00000556237 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
HIF1A-208ENST00000556237 EHBP1Q8NDI1 1231 aa8.89□□□□□ -0.99
HIF1A-208ENST00000556237 CARD11Q9BXL7 1154 aa8.89□□□□□ -0.99
HIF1A-208ENST00000556237 UHRF1BP1Q6BDS2 1440 aa8.88□□□□□ -0.99
HIF1A-208ENST00000556237 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
HIF1A-208ENST00000556237 RPGRIP1LQ68CZ1 1315 aa8.88□□□□□ -0.99
HIF1A-208ENST00000556237 CEBPAP49715 358 aaPredicted RBP8.88□□□□□ -0.99
HIF1A-208ENST00000556237 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
HIF1A-208ENST00000556237 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
HIF1A-208ENST00000556237 CAMSAP1Q5T5Y3 1602 aa8.87□□□□□ -0.99
HIF1A-208ENST00000556237 SIAH2O43255 324 aa8.87□□□□□ -0.99
HIF1A-208ENST00000556237 MS4A1P11836 297 aa8.87□□□□□ -0.99
HIF1A-208ENST00000556237 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
HIF1A-208ENST00000556237 PTCRAQ6ISU1 281 aaPredicted RBP8.87□□□□□ -0.99
HIF1A-208ENST00000556237 SIGLEC1Q9BZZ2 1709 aa8.87□□□□□ -0.99
HIF1A-208ENST00000556237 CLTCL1P53675 1640 aa8.87□□□□□ -0.99
HIF1A-208ENST00000556237 UGGT1Q9NYU2 1555 aa8.86□□□□□ -0.99
HIF1A-208ENST00000556237 ADGRF5Q8IZF2 1346 aa8.86□□□□□ -0.99
HIF1A-208ENST00000556237 BRPF1P55201 1214 aaPredicted RBP8.86□□□□□ -0.99
HIF1A-208ENST00000556237 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
HIF1A-208ENST00000556237 SLC16A10Q8TF71 515 aa8.86□□□□□ -0.99
HIF1A-208ENST00000556237 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
HIF1A-208ENST00000556237 CLTCQ00610 1675 aaKnown RBP8.85□□□□□ -0.99
HIF1A-208ENST00000556237 ZC3H13Q5T200 1668 aaKnown RBP8.85□□□□□ -0.99
HIF1A-208ENST00000556237 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
HIF1A-208ENST00000556237 FDX1P10109 184 aa8.85□□□□□ -0.99
HIF1A-208ENST00000556237 DDX10Q13206 875 aaKnown RBP8.85□□□□□ -0.99
HIF1A-208ENST00000556237 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
HIF1A-208ENST00000556237 PRAG1Q86YV5 1406 aa8.85□□□□□ -0.99
HIF1A-208ENST00000556237 ROCK2O75116 1388 aaKnown RBP8.85□□□□□ -0.99
HIF1A-208ENST00000556237 ERVK-7P63135 1459 aa8.84□□□□□ -0.99
HIF1A-208ENST00000556237 C6orf229H3BNL8 230 aa8.84□□□□□ -0.99
HIF1A-208ENST00000556237 CAPN5O15484 640 aaPredicted RBP8.84□□□□□ -0.99
HIF1A-208ENST00000556237 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
HIF1A-208ENST00000556237 PCDHGC3Q9UN70 934 aa8.84□□□□□ -0.99
HIF1A-208ENST00000556237 KIF1BO60333 1816 aa8.83□□□□□ -1
HIF1A-208ENST00000556237 ST20-MTHFSA0A0A6YYL1 179 aa8.83□□□□□ -1
HIF1A-208ENST00000556237 BMP1P13497 986 aa8.83□□□□□ -1
HIF1A-208ENST00000556237 SH3BP2P78314 561 aa8.83□□□□□ -1
HIF1A-208ENST00000556237 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
HIF1A-208ENST00000556237 TNRQ92752 1358 aa8.83□□□□□ -1
HIF1A-208ENST00000556237 SYNMO15061 1565 aa8.82□□□□□ -1
HIF1A-208ENST00000556237 TRIM46Q7Z4K8 759 aa8.82□□□□□ -1
HIF1A-208ENST00000556237 C14orf93Q9H972 538 aaKnown RBP8.82□□□□□ -1
HIF1A-208ENST00000556237 USP47Q96K76 1375 aa8.82□□□□□ -1
HIF1A-208ENST00000556237 RALGAPBQ86X10 1494 aa8.82□□□□□ -1
HIF1A-208ENST00000556237 NEURL4Q96JN8 1562 aa8.82□□□□□ -1
HIF1A-208ENST00000556237 PREX1Q8TCU6 1659 aa8.81□□□□□ -1
HIF1A-208ENST00000556237 NEUROD2Q15784 382 aa8.81□□□□□ -1
HIF1A-208ENST00000556237 PTPRNQ16849 979 aa8.81□□□□□ -1
HIF1A-208ENST00000556237 NPAS3Q8IXF0 933 aa8.81□□□□□ -1
HIF1A-208ENST00000556237 POLR3GLQ9BT43 218 aa8.81□□□□□ -1
HIF1A-208ENST00000556237 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
HIF1A-208ENST00000556237 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.8□□□□□ -1
HIF1A-208ENST00000556237 BEGAINQ9BUH8 593 aa8.8□□□□□ -1
HIF1A-208ENST00000556237 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
HIF1A-208ENST00000556237 ADGRB3O60242 1522 aa8.8□□□□□ -1
HIF1A-208ENST00000556237 SPATA31D1Q6ZQQ2 1576 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 GPRASP1Q5JY77 1395 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 TMEM132EQ6IEE7 984 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 IRF7Q92985 503 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 FAM117AQ9C073 453 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 WASHC2AQ641Q2 1341 aa8.79□□□□□ -1
HIF1A-208ENST00000556237 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
HIF1A-208ENST00000556237 PIK3C2BO00750 1634 aa8.78□□□□□ -1
HIF1A-208ENST00000556237 MYOM2P54296 1465 aa8.77□□□□□ -1
HIF1A-208ENST00000556237 TRPM1Q7Z4N2 1603 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 GMPRP36959 345 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 KCNH2Q12809 1159 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 THEMISQ8N1K5 641 aaPredicted RBP8.77□□□□□ -1.01
HIF1A-208ENST00000556237 BAP1Q92560 729 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 TRAK1Q9UPV9 953 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 TLL2Q9Y6L7 1015 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 MROH2AA6NES4 1674 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 ZFYVE9O95405 1425 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 RIMS2Q9UQ26 1411 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 A2ML1A8K2U0 1454 aa8.77□□□□□ -1.01
HIF1A-208ENST00000556237 TMEM131LA2VDJ0 1609 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 CCDC7Q96M83 1385 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 H3BM21 787 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 NDUFV2P19404 249 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 VARSP26640 1264 aaKnown RBP8.76□□□□□ -1.01
HIF1A-208ENST00000556237 TMF1P82094 1093 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 TXNDC2Q86VQ3 553 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 PRR7Q8TB68 274 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 ZFP42Q96MM3 310 aa8.76□□□□□ -1.01
HIF1A-208ENST00000556237 STK26Q9P289 416 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms