RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
HNRNPC-221ENST00000555883 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
HNRNPC-221ENST00000555883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.36
HNRNPC-221ENST00000555883 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
HNRNPC-221ENST00000555883 ITPK1Q13572 414 aa17.27■□□□□ 0.36
HNRNPC-221ENST00000555883 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
HNRNPC-221ENST00000555883 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
HNRNPC-221ENST00000555883 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
HNRNPC-221ENST00000555883 GPR162Q16538 588 aa17.26■□□□□ 0.35
HNRNPC-221ENST00000555883 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
HNRNPC-221ENST00000555883 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
HNRNPC-221ENST00000555883 MTHFSP49914 203 aa17.25■□□□□ 0.35
HNRNPC-221ENST00000555883 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
HNRNPC-221ENST00000555883 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
HNRNPC-221ENST00000555883 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
HNRNPC-221ENST00000555883 ADRA2BP18089 450 aa17.24■□□□□ 0.35
HNRNPC-221ENST00000555883 CABP4P57796 275 aa17.24■□□□□ 0.35
HNRNPC-221ENST00000555883 RC3H1Q5TC82 1133 aaKnown RBP17.24■□□□□ 0.35
HNRNPC-221ENST00000555883 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
HNRNPC-221ENST00000555883 CICQ96RK0 1608 aaPredicted RBP17.23■□□□□ 0.35
HNRNPC-221ENST00000555883 GNPATO15228 680 aa17.23■□□□□ 0.35
HNRNPC-221ENST00000555883 CHD4Q14839 1912 aa17.23■□□□□ 0.35
HNRNPC-221ENST00000555883 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
HNRNPC-221ENST00000555883 PHF14O94880 888 aa17.22■□□□□ 0.35
HNRNPC-221ENST00000555883 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
HNRNPC-221ENST00000555883 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
HNRNPC-221ENST00000555883 SLC4A9Q96Q91 983 aa17.22■□□□□ 0.35
HNRNPC-221ENST00000555883 COL5A3P25940 1745 aaPredicted RBP17.21■□□□□ 0.35
HNRNPC-221ENST00000555883 RTCBQ9Y3I0 505 aaKnown RBP17.21■□□□□ 0.35
HNRNPC-221ENST00000555883 MRC1P22897 1456 aa17.2■□□□□ 0.34
HNRNPC-221ENST00000555883 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
HNRNPC-221ENST00000555883 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
HNRNPC-221ENST00000555883 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
HNRNPC-221ENST00000555883 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
HNRNPC-221ENST00000555883 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
HNRNPC-221ENST00000555883 RPS6KA4O75676 772 aa17.18■□□□□ 0.34
HNRNPC-221ENST00000555883 YBX3P16989 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
HNRNPC-221ENST00000555883 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
HNRNPC-221ENST00000555883 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
HNRNPC-221ENST00000555883 ADAMTS7Q9UKP4 1686 aa17.17■□□□□ 0.34
HNRNPC-221ENST00000555883 SMIM5Q71RC9 77 aa17.17■□□□□ 0.34
HNRNPC-221ENST00000555883 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
HNRNPC-221ENST00000555883 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
HNRNPC-221ENST00000555883 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
HNRNPC-221ENST00000555883 HMOX1P09601 288 aa17.15■□□□□ 0.34
HNRNPC-221ENST00000555883 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
HNRNPC-221ENST00000555883 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
HNRNPC-221ENST00000555883 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
HNRNPC-221ENST00000555883 MMP10P09238 476 aa17.14■□□□□ 0.33
HNRNPC-221ENST00000555883 TJP1Q07157 1748 aa17.13■□□□□ 0.33
HNRNPC-221ENST00000555883 GYS1P13807 737 aa17.13■□□□□ 0.33
HNRNPC-221ENST00000555883 RFC4P35249 363 aa17.13■□□□□ 0.33
HNRNPC-221ENST00000555883 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
HNRNPC-221ENST00000555883 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
HNRNPC-221ENST00000555883 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
HNRNPC-221ENST00000555883 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
HNRNPC-221ENST00000555883 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
HNRNPC-221ENST00000555883 TGFB2P61812 414 aa17.11■□□□□ 0.33
HNRNPC-221ENST00000555883 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
HNRNPC-221ENST00000555883 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
HNRNPC-221ENST00000555883 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
HNRNPC-221ENST00000555883 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
HNRNPC-221ENST00000555883 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
HNRNPC-221ENST00000555883 INTS5Q6P9B9 1019 aaKnown RBP17.09■□□□□ 0.33
HNRNPC-221ENST00000555883 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
HNRNPC-221ENST00000555883 PXDNLA1KZ92 1463 aa17.09■□□□□ 0.33
HNRNPC-221ENST00000555883 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
HNRNPC-221ENST00000555883 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.32
HNRNPC-221ENST00000555883 ADCY9O60503 1353 aa17.07■□□□□ 0.32
HNRNPC-221ENST00000555883 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
HNRNPC-221ENST00000555883 CYP19A1P11511 503 aaPredicted RBP17.07■□□□□ 0.32
HNRNPC-221ENST00000555883 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
HNRNPC-221ENST00000555883 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
HNRNPC-221ENST00000555883 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
HNRNPC-221ENST00000555883 GNAT3A8MTJ3 354 aa17.06■□□□□ 0.32
HNRNPC-221ENST00000555883 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
HNRNPC-221ENST00000555883 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
HNRNPC-221ENST00000555883 CEMIPQ8WUJ3 1361 aa17.05■□□□□ 0.32
HNRNPC-221ENST00000555883 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
HNRNPC-221ENST00000555883 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
HNRNPC-221ENST00000555883 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
HNRNPC-221ENST00000555883 C1QTNF8P60827 252 aa17.04■□□□□ 0.32
HNRNPC-221ENST00000555883 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 TEFQ10587 303 aa17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 FKBP8Q14318 412 aa17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 ATP10DQ9P241 1426 aa17.03■□□□□ 0.32
HNRNPC-221ENST00000555883 COL15A1P39059 1388 aa17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 ZPR1O75312 459 aa17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 TM4SF1P30408 202 aa17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.32
HNRNPC-221ENST00000555883 FCHSD2O94868 740 aa17.01■□□□□ 0.31
HNRNPC-221ENST00000555883 STARD3NLO95772 234 aa17.01■□□□□ 0.31
HNRNPC-221ENST00000555883 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
HNRNPC-221ENST00000555883 NARFQ9UHQ1 456 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms