RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 BCS1LQ9Y276 419 aa15.05■□□□□ -0
TDP1-212ENST00000555565 WDR90Q96KV7 1748 aa15.04■□□□□ -0
TDP1-212ENST00000555565 KCNA3P22001 575 aa15.04■□□□□ -0
TDP1-212ENST00000555565 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
TDP1-212ENST00000555565 ASAP1Q9ULH1 1129 aa15.04■□□□□ -0
TDP1-212ENST00000555565 KIF20BQ96Q89 1820 aa15.03■□□□□ -0
TDP1-212ENST00000555565 NCAPD2Q15021 1401 aa15.03■□□□□ -0
TDP1-212ENST00000555565 GNPATO15228 680 aa15.03■□□□□ -0
TDP1-212ENST00000555565 DPEP1P16444 411 aa15.03■□□□□ -0
TDP1-212ENST00000555565 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
TDP1-212ENST00000555565 C10orf71Q711Q0 1435 aa15.02■□□□□ -0
TDP1-212ENST00000555565 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
TDP1-212ENST00000555565 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
TDP1-212ENST00000555565 PKD1L3Q7Z443 1732 aa15.01□□□□□ -0.01
TDP1-212ENST00000555565 ATP6V1AP38606 617 aa15.01□□□□□ -0.01
TDP1-212ENST00000555565 FSTL1Q12841 308 aa15.01□□□□□ -0.01
TDP1-212ENST00000555565 SLC4A9Q96Q91 983 aa15.01□□□□□ -0.01
TDP1-212ENST00000555565 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
TDP1-212ENST00000555565 FLT4P35916 1363 aa15□□□□□ -0.01
TDP1-212ENST00000555565 KIF24Q5T7B8 1368 aa15□□□□□ -0.01
TDP1-212ENST00000555565 PRELPP51888 382 aa15□□□□□ -0.01
TDP1-212ENST00000555565 C9orf131Q5VYM1 1079 aa15□□□□□ -0.01
TDP1-212ENST00000555565 NLGN1Q8N2Q7 840 aa15□□□□□ -0.01
TDP1-212ENST00000555565 CAPN15O75808 1086 aa14.99□□□□□ -0.01
TDP1-212ENST00000555565 BRCA1P38398 1863 aaKnown RBP14.98□□□□□ -0.01
TDP1-212ENST00000555565 FCHSD2O94868 740 aa14.98□□□□□ -0.01
TDP1-212ENST00000555565 GYS1P13807 737 aa14.98□□□□□ -0.01
TDP1-212ENST00000555565 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
TDP1-212ENST00000555565 ARHGEF1Q92888 912 aaKnown RBP14.98□□□□□ -0.01
TDP1-212ENST00000555565 TMOD3Q9NYL9 352 aa14.98□□□□□ -0.01
TDP1-212ENST00000555565 KDRP35968 1356 aa14.98□□□□□ -0.01
TDP1-212ENST00000555565 TNS4Q8IZW8 715 aa14.97□□□□□ -0.01
TDP1-212ENST00000555565 DCAF5Q96JK2 942 aa14.97□□□□□ -0.01
TDP1-212ENST00000555565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.017e-6■■□□□ 12.8
TDP1-212ENST00000555565 EMILIN1Q9Y6C2 1016 aa14.97□□□□□ -0.01
TDP1-212ENST00000555565 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
TDP1-212ENST00000555565 PHKG2P15735 406 aa14.96□□□□□ -0.01
TDP1-212ENST00000555565 RC3H1Q5TC82 1133 aaKnown RBP14.96□□□□□ -0.01
TDP1-212ENST00000555565 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
TDP1-212ENST00000555565 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
TDP1-212ENST00000555565 CCDC87Q9NVE4 849 aa14.96□□□□□ -0.01
TDP1-212ENST00000555565 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
TDP1-212ENST00000555565 RTCBQ9Y3I0 505 aaKnown RBP14.96□□□□□ -0.01
TDP1-212ENST00000555565 EYA1Q99502 592 aa14.95□□□□□ -0.02
TDP1-212ENST00000555565 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
TDP1-212ENST00000555565 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
TDP1-212ENST00000555565 HSPA5P11021 654 aaKnown RBP14.94□□□□□ -0.02
TDP1-212ENST00000555565 ADRA2BP18089 450 aa14.94□□□□□ -0.02
TDP1-212ENST00000555565 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
TDP1-212ENST00000555565 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
TDP1-212ENST00000555565 IFNL2Q8IZJ0 200 aa14.94□□□□□ -0.02
TDP1-212ENST00000555565 PIM2Q9P1W9 311 aa14.94□□□□□ -0.02
TDP1-212ENST00000555565 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
TDP1-212ENST00000555565 RPS6KA4O75676 772 aa14.93□□□□□ -0.02
TDP1-212ENST00000555565 POLR3GLQ9BT43 218 aa14.93□□□□□ -0.02
TDP1-212ENST00000555565 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 ANKRD26Q9UPS8 1709 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 ARFGEF1Q9Y6D6 1849 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 RNF181Q9P0P0 153 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 PARP3Q9Y6F1 533 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 ZNF831Q5JPB2 1677 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
TDP1-212ENST00000555565 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
TDP1-212ENST00000555565 DDR1Q08345 913 aa14.91□□□□□ -0.02
TDP1-212ENST00000555565 DALRD3Q5D0E6 543 aaKnown RBP14.91□□□□□ -0.02
TDP1-212ENST00000555565 SMC1BQ8NDV3 1235 aa14.91□□□□□ -0.02
TDP1-212ENST00000555565 RFC4P35249 363 aa14.9□□□□□ -0.02
TDP1-212ENST00000555565 FKBP8Q14318 412 aa14.9□□□□□ -0.02
TDP1-212ENST00000555565 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
TDP1-212ENST00000555565 ERVV-2B6SEH9 535 aa14.89□□□□□ -0.03
TDP1-212ENST00000555565 HSPA1AP0DMV8 641 aaKnown RBP14.89□□□□□ -0.03
TDP1-212ENST00000555565 HSPA1BP0DMV9 641 aaKnown RBP14.89□□□□□ -0.03
TDP1-212ENST00000555565 CHRNA5P30532 468 aa14.89□□□□□ -0.03
TDP1-212ENST00000555565 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
TDP1-212ENST00000555565 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
TDP1-212ENST00000555565 TM4SF1P30408 202 aa14.88□□□□□ -0.03
TDP1-212ENST00000555565 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
TDP1-212ENST00000555565 PANK3Q9H999 370 aa14.88□□□□□ -0.03
TDP1-212ENST00000555565 SRP68Q9UHB9 627 aaKnown RBP14.88□□□□□ -0.03
TDP1-212ENST00000555565 KDM6AO15550 1401 aaPredicted RBP14.88□□□□□ -0.03
TDP1-212ENST00000555565 SBF1O95248 1867 aa14.88□□□□□ -0.03
TDP1-212ENST00000555565 TNNT2P45379 298 aaPredicted RBP14.87□□□□□ -0.03
TDP1-212ENST00000555565 TNRC6CQ9HCJ0 1690 aaKnown RBP14.87□□□□□ -0.03
TDP1-212ENST00000555565 USP42Q9H9J4 1324 aaKnown RBP14.86□□□□□ -0.03
TDP1-212ENST00000555565 POTECB2RU33 542 aa14.85□□□□□ -0.03
TDP1-212ENST00000555565 POLRMTO00411 1230 aaKnown RBP14.85□□□□□ -0.03
TDP1-212ENST00000555565 ZC3H4Q9UPT8 1303 aaKnown RBP14.85□□□□□ -0.03
TDP1-212ENST00000555565 GLTPD2A6NH11 291 aa14.84□□□□□ -0.03
TDP1-212ENST00000555565 VEGFAP15692 232 aaPredicted RBP14.84□□□□□ -0.03
TDP1-212ENST00000555565 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
TDP1-212ENST00000555565 RASSF7Q02833 373 aa14.84□□□□□ -0.03
TDP1-212ENST00000555565 EIF4A2Q14240 407 aaKnown RBP14.84□□□□□ -0.03
TDP1-212ENST00000555565 INTS5Q6P9B9 1019 aaKnown RBP14.83□□□□□ -0.04
TDP1-212ENST00000555565 ADAMTS7Q9UKP4 1686 aa14.83□□□□□ -0.04
TDP1-212ENST00000555565 PTCD1O75127 700 aaKnown RBP14.81□□□□□ -0.04
TDP1-212ENST00000555565 LMNB1P20700 586 aa14.81□□□□□ -0.04
TDP1-212ENST00000555565 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
TDP1-212ENST00000555565 CABP4P57796 275 aa14.8□□□□□ -0.04
TDP1-212ENST00000555565 NFKBIEO00221 500 aa14.79□□□□□ -0.04
TDP1-212ENST00000555565 NFATC2IPQ8NCF5 419 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms