RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 LNPKQ9C0E8 428 aa29.57■■■□□ 2.32
STRN3-207ENST00000555358 CPDO75976 1380 aa29.56■■■□□ 2.32
STRN3-207ENST00000555358 NLRP2Q9NX02 1062 aa29.56■■■□□ 2.32
STRN3-207ENST00000555358 PLEKHO1Q53GL0 409 aaPredicted RBP29.55■■■□□ 2.32
STRN3-207ENST00000555358 ZNF530Q6P9A1 599 aaPredicted RBP29.55■■■□□ 2.32
STRN3-207ENST00000555358 HSCBQ8IWL3 235 aa29.55■■■□□ 2.32
STRN3-207ENST00000555358 LGR6Q9HBX8 967 aa29.54■■■□□ 2.32
STRN3-207ENST00000555358 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.54■■■□□ 2.32
STRN3-207ENST00000555358 ZBTB7BO15156 539 aaPredicted RBP29.53■■■□□ 2.32
STRN3-207ENST00000555358 LTBP4Q8N2S1 1624 aa29.53■■■□□ 2.32
STRN3-207ENST00000555358 FAM208AQ9UK61 1670 aaKnown RBP29.53■■■□□ 2.32
STRN3-207ENST00000555358 ABCA3Q99758 1704 aa29.53■■■□□ 2.32
STRN3-207ENST00000555358 FSD2A1L4K1 749 aa29.53■■■□□ 2.32
STRN3-207ENST00000555358 DDIT3P35638 169 aa29.53■■■□□ 2.32
STRN3-207ENST00000555358 CSB-PGBD3P0DP91 1061 aa29.52■■■□□ 2.32
STRN3-207ENST00000555358 AMOTQ4VCS5 1084 aa29.52■■■□□ 2.32
STRN3-207ENST00000555358 CEMIPQ8WUJ3 1361 aa29.52■■■□□ 2.32
STRN3-207ENST00000555358 ABCC6O95255 1503 aa29.51■■■□□ 2.31
STRN3-207ENST00000555358 BMP2KLQ5H9B9 411 aa29.51■■■□□ 2.31
STRN3-207ENST00000555358 ARHGAP45Q92619 1136 aa29.51■■■□□ 2.31
STRN3-207ENST00000555358 SNX21Q969T3 373 aa29.51■■■□□ 2.31
STRN3-207ENST00000555358 AKAP4Q5JQC9 854 aa29.51■■■□□ 2.31
STRN3-207ENST00000555358 TAF7Q15545 349 aaPredicted RBP29.5■■■□□ 2.31
STRN3-207ENST00000555358 HAP1P54257 671 aaPredicted RBP29.49■■■□□ 2.31
STRN3-207ENST00000555358 MPRIPQ6WCQ1 1025 aa29.49■■■□□ 2.31
STRN3-207ENST00000555358 PRDM11Q9NQV5 511 aa29.49■■■□□ 2.31
STRN3-207ENST00000555358 ROBO1Q9Y6N7 1651 aa29.48■■■□□ 2.31
STRN3-207ENST00000555358 GCC1Q96CN9 775 aa29.48■■■□□ 2.31
STRN3-207ENST00000555358 TRAK2O60296 914 aa29.47■■■□□ 2.31
STRN3-207ENST00000555358 XRCC6P12956 609 aaKnown RBP eCLIP29.47■■■□□ 2.318e-6■■□□□ 13.6
STRN3-207ENST00000555358 GOLGA6L3A6NEY3 463 aa29.46■■■□□ 2.31
STRN3-207ENST00000555358 MEGF6O75095 1541 aa29.45■■■□□ 2.31
STRN3-207ENST00000555358 C1orf141Q5JVX7 400 aa29.45■■■□□ 2.31
STRN3-207ENST00000555358 RAPGEF4Q8WZA2 1011 aa29.45■■■□□ 2.31
STRN3-207ENST00000555358 ABCC4O15439 1325 aa29.45■■■□□ 2.31
STRN3-207ENST00000555358 CHMP4BQ9H444 224 aaKnown RBP29.45■■■□□ 2.3
STRN3-207ENST00000555358 ANKRD45Q5TZF3 282 aa29.44■■■□□ 2.3
STRN3-207ENST00000555358 C1orf115Q9H7X2 142 aa29.44■■■□□ 2.3
STRN3-207ENST00000555358 KIF2CQ99661 725 aa29.44■■■□□ 2.3
STRN3-207ENST00000555358 GZF1Q9H116 711 aaPredicted RBP29.43■■■□□ 2.3
STRN3-207ENST00000555358 SIRT2Q8IXJ6 389 aa29.43■■■□□ 2.3
STRN3-207ENST00000555358 RNMTO43148 476 aaKnown RBP29.42■■■□□ 2.3
STRN3-207ENST00000555358 BABAM1Q9NWV8 329 aa29.41■■■□□ 2.3
STRN3-207ENST00000555358 DDX11L8A8MPP1 907 aa29.41■■■□□ 2.3
STRN3-207ENST00000555358 TATP17735 454 aaPredicted RBP29.41■■■□□ 2.3
STRN3-207ENST00000555358 RRAGDQ9NQL2 400 aaPredicted RBP29.4■■■□□ 2.3
STRN3-207ENST00000555358 KDM3BQ7LBC6 1761 aa29.39■■■□□ 2.3
STRN3-207ENST00000555358 TEFQ10587 303 aa29.39■■■□□ 2.3
STRN3-207ENST00000555358 SLC4A2P04920 1241 aa29.39■■■□□ 2.29
STRN3-207ENST00000555358 COL5A2P05997 1499 aaPredicted RBP29.38■■■□□ 2.29
STRN3-207ENST00000555358 KCNQ3O43525 872 aa29.37■■■□□ 2.29
STRN3-207ENST00000555358 WDR17Q8IZU2 1322 aa29.37■■■□□ 2.29
STRN3-207ENST00000555358 TBC1D9Q6ZT07 1266 aa29.37■■■□□ 2.29
STRN3-207ENST00000555358 ARXQ96QS3 562 aa29.37■■■□□ 2.29
STRN3-207ENST00000555358 API5Q9BZZ5 524 aaKnown RBP29.37■■■□□ 2.29
STRN3-207ENST00000555358 CIZ1Q9ULV3 898 aaPredicted RBP29.37■■■□□ 2.29
STRN3-207ENST00000555358 NECTIN2Q92692 538 aa29.36■■■□□ 2.29
STRN3-207ENST00000555358 RGS12O14924 1447 aa29.35■■■□□ 2.29
STRN3-207ENST00000555358 PANK2Q9BZ23 570 aa29.35■■■□□ 2.29
STRN3-207ENST00000555358 BTBD11A6QL63 1104 aa29.35■■■□□ 2.29
STRN3-207ENST00000555358 TOM1L2Q6ZVM7 507 aa29.35■■■□□ 2.29
STRN3-207ENST00000555358 G2E3Q7L622 706 aa29.35■■■□□ 2.29
STRN3-207ENST00000555358 TNPO1Q92973 898 aaKnown RBP29.35■■■□□ 2.29
STRN3-207ENST00000555358 ADAMTS7Q9UKP4 1686 aa29.34■■■□□ 2.29
STRN3-207ENST00000555358 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
STRN3-207ENST00000555358 HSP90AB1P08238 724 aaKnown RBP29.33■■■□□ 2.29
STRN3-207ENST00000555358 SPG7Q9UQ90 795 aa29.33■■■□□ 2.29
STRN3-207ENST00000555358 OVOS2A0A0G2JMS6 1433 aa29.33■■■□□ 2.29
STRN3-207ENST00000555358 SIPA1L3O60292 1781 aaPredicted RBP29.33■■■□□ 2.29
STRN3-207ENST00000555358 CD2BP2O95400 341 aaKnown RBP29.33■■■□□ 2.29
STRN3-207ENST00000555358 PHKG2P15735 406 aa29.33■■■□□ 2.29
STRN3-207ENST00000555358 EIF4A1P60842 406 aaKnown RBP29.33■■■□□ 2.29
STRN3-207ENST00000555358 STRN4Q9NRL3 753 aa29.32■■■□□ 2.28
STRN3-207ENST00000555358 PKD1L3Q7Z443 1732 aa29.32■■■□□ 2.28
STRN3-207ENST00000555358 RAB3GAP1Q15042 981 aa29.32■■■□□ 2.28
STRN3-207ENST00000555358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.32■■■□□ 2.284e-9■■□□□ 12.8
STRN3-207ENST00000555358 SCN11AQ9UI33 1791 aa29.32■■■□□ 2.28
STRN3-207ENST00000555358 KDM6AO15550 1401 aaPredicted RBP29.31■■■□□ 2.28
STRN3-207ENST00000555358 MRE11P49959 708 aa29.3■■■□□ 2.28
STRN3-207ENST00000555358 PTPRCP08575 1304 aa29.3■■■□□ 2.28
STRN3-207ENST00000555358 CYP27B1O15528 508 aa29.29■■■□□ 2.28
STRN3-207ENST00000555358 CCDC30Q5VVM6 783 aa29.29■■■□□ 2.28
STRN3-207ENST00000555358 LARP1Q6PKG0 1096 aaKnown RBP29.29■■■□□ 2.28
STRN3-207ENST00000555358 STK31Q9BXU1 1019 aa29.29■■■□□ 2.28
STRN3-207ENST00000555358 IFNL2Q8IZJ0 200 aa29.28■■■□□ 2.28
STRN3-207ENST00000555358 CACNA1FO60840 1977 aa29.27■■■□□ 2.28
STRN3-207ENST00000555358 SOS1Q07889 1333 aaPredicted RBP29.27■■■□□ 2.28
STRN3-207ENST00000555358 K7ELQ4 463 aaPredicted RBP29.26■■■□□ 2.28
STRN3-207ENST00000555358 EVA1CP58658 441 aa29.26■■■□□ 2.28
STRN3-207ENST00000555358 CDC45O75419 566 aa29.26■■■□□ 2.27
STRN3-207ENST00000555358 GSPT1P15170 499 aaKnown RBP29.26■■■□□ 2.27
STRN3-207ENST00000555358 HDGFL1Q5TGJ6 251 aa29.25■■■□□ 2.27
STRN3-207ENST00000555358 INTS3Q68E01 1043 aaKnown RBP29.25■■■□□ 2.27
STRN3-207ENST00000555358 GBP4Q96PP9 640 aa29.25■■■□□ 2.27
STRN3-207ENST00000555358 RBM42Q9BTD8 480 aaKnown RBP29.25■■■□□ 2.27
STRN3-207ENST00000555358 ISY1Q9ULR0 285 aaKnown RBP29.25■■■□□ 2.27
STRN3-207ENST00000555358 PARP4Q9UKK3 1724 aaKnown RBP29.25■■■□□ 2.27
STRN3-207ENST00000555358 F6X3S4 739 aa29.24■■■□□ 2.27
STRN3-207ENST00000555358 EIF2S2P20042 333 aaKnown RBP29.24■■■□□ 2.27
STRN3-207ENST00000555358 CARD10Q9BWT7 1032 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms