RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
XRCC3-212ENST00000555231 MMP10P09238 476 aa18.15■□□□□ 0.5
XRCC3-212ENST00000555231 EIF4A2Q14240 407 aaKnown RBP18.15■□□□□ 0.5
XRCC3-212ENST00000555231 IFFO2Q5TF58 517 aa18.15■□□□□ 0.5
XRCC3-212ENST00000555231 KIF13BQ9NQT8 1826 aa18.14■□□□□ 0.5
XRCC3-212ENST00000555231 HSPA6P17066 643 aa18.14■□□□□ 0.49
XRCC3-212ENST00000555231 CEP350Q5VT06 3117 aa18.14■□□□□ 0.49
XRCC3-212ENST00000555231 CICQ96RK0 1608 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-212ENST00000555231 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
XRCC3-212ENST00000555231 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
XRCC3-212ENST00000555231 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
XRCC3-212ENST00000555231 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
XRCC3-212ENST00000555231 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
XRCC3-212ENST00000555231 KDRP35968 1356 aa18.12■□□□□ 0.49
XRCC3-212ENST00000555231 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
XRCC3-212ENST00000555231 KIF3CO14782 793 aa18.11■□□□□ 0.49
XRCC3-212ENST00000555231 A0A0G2JLW4 131 aa18.1■□□□□ 0.49
XRCC3-212ENST00000555231 BCS1LQ9Y276 419 aa18.1■□□□□ 0.49
XRCC3-212ENST00000555231 MYH14Q7Z406 1995 aaKnown RBP18.1■□□□□ 0.49
XRCC3-212ENST00000555231 ARHGEF1Q92888 912 aaKnown RBP18.09■□□□□ 0.49
XRCC3-212ENST00000555231 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
XRCC3-212ENST00000555231 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
XRCC3-212ENST00000555231 ERVV-2B6SEH9 535 aa18.08■□□□□ 0.48
XRCC3-212ENST00000555231 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.48
XRCC3-212ENST00000555231 C10orf71Q711Q0 1435 aa18.07■□□□□ 0.48
XRCC3-212ENST00000555231 TGFB2P61812 414 aa18.07■□□□□ 0.48
XRCC3-212ENST00000555231 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
XRCC3-212ENST00000555231 BRCA1P38398 1863 aaKnown RBP18.07■□□□□ 0.48
XRCC3-212ENST00000555231 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
XRCC3-212ENST00000555231 GYS1P13807 737 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 DPEP1P16444 411 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 RFC4P35249 363 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 CABP4P57796 275 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
XRCC3-212ENST00000555231 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
XRCC3-212ENST00000555231 ZNF530Q6P9A1 599 aaPredicted RBP18.06■□□□□ 0.48
XRCC3-212ENST00000555231 ARHGAP27Q6ZUM4 889 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 DCAF5Q96JK2 942 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
XRCC3-212ENST00000555231 CNTNAP4Q9C0A0 1308 aa18.05■□□□□ 0.48
XRCC3-212ENST00000555231 RPS6KA4O75676 772 aa18.05■□□□□ 0.48
XRCC3-212ENST00000555231 FCHSD2O94868 740 aa18.05■□□□□ 0.48
XRCC3-212ENST00000555231 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
XRCC3-212ENST00000555231 ADRA2BP18089 450 aa18.04■□□□□ 0.48
XRCC3-212ENST00000555231 AEBP1Q8IUX7 1158 aa18.04■□□□□ 0.48
XRCC3-212ENST00000555231 PARP3Q9Y6F1 533 aa18.04■□□□□ 0.48
XRCC3-212ENST00000555231 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
XRCC3-212ENST00000555231 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
XRCC3-212ENST00000555231 PANK3Q9H999 370 aa18.03■□□□□ 0.48
XRCC3-212ENST00000555231 MTHFSP49914 203 aa18.02■□□□□ 0.48
XRCC3-212ENST00000555231 TJP1Q07157 1748 aa18.02■□□□□ 0.48
XRCC3-212ENST00000555231 NMRK2Q9NPI5 230 aa18.02■□□□□ 0.48
XRCC3-212ENST00000555231 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
XRCC3-212ENST00000555231 ARFGEF1Q9Y6D6 1849 aa18.02■□□□□ 0.47
XRCC3-212ENST00000555231 AMOTQ4VCS5 1084 aa18.01■□□□□ 0.47
XRCC3-212ENST00000555231 KCNA3P22001 575 aa18■□□□□ 0.47
XRCC3-212ENST00000555231 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
XRCC3-212ENST00000555231 C1orf141Q5JVX7 400 aa18■□□□□ 0.47
XRCC3-212ENST00000555231 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
XRCC3-212ENST00000555231 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
XRCC3-212ENST00000555231 TOMM70O94826 608 aa17.99■□□□□ 0.47
XRCC3-212ENST00000555231 FKBP8Q14318 412 aa17.99■□□□□ 0.47
XRCC3-212ENST00000555231 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
XRCC3-212ENST00000555231 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
XRCC3-212ENST00000555231 APLP1P51693 650 aa17.98■□□□□ 0.47
XRCC3-212ENST00000555231 C9orf131Q5VYM1 1079 aa17.98■□□□□ 0.47
XRCC3-212ENST00000555231 SULT6B1Q6IMI4 303 aa17.98■□□□□ 0.47
XRCC3-212ENST00000555231 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
XRCC3-212ENST00000555231 DDR1Q08345 913 aa17.97■□□□□ 0.47
XRCC3-212ENST00000555231 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
XRCC3-212ENST00000555231 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
XRCC3-212ENST00000555231 CHRNA5P30532 468 aa17.96■□□□□ 0.47
XRCC3-212ENST00000555231 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
XRCC3-212ENST00000555231 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
XRCC3-212ENST00000555231 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
XRCC3-212ENST00000555231 ADAMTS7Q9UKP4 1686 aa17.95■□□□□ 0.46
XRCC3-212ENST00000555231 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
XRCC3-212ENST00000555231 DALRD3Q5D0E6 543 aaKnown RBP17.94■□□□□ 0.46
XRCC3-212ENST00000555231 INTS5Q6P9B9 1019 aaKnown RBP17.94■□□□□ 0.46
XRCC3-212ENST00000555231 DNAJC5GQ8N7S2 189 aa17.94■□□□□ 0.46
XRCC3-212ENST00000555231 SBF1O95248 1867 aa17.94■□□□□ 0.46
XRCC3-212ENST00000555231 KCPQ6ZWJ8 1503 aa17.93■□□□□ 0.46
XRCC3-212ENST00000555231 DNAJC10Q8IXB1 793 aa17.93■□□□□ 0.46
XRCC3-212ENST00000555231 RNF181Q9P0P0 153 aa17.93■□□□□ 0.46
XRCC3-212ENST00000555231 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
XRCC3-212ENST00000555231 POLRMTO00411 1230 aaKnown RBP17.92■□□□□ 0.46
XRCC3-212ENST00000555231 IL13P35225 146 aa17.92■□□□□ 0.46
XRCC3-212ENST00000555231 HTRA3P83110 453 aa17.92■□□□□ 0.46
XRCC3-212ENST00000555231 C16orf71Q8IYS4 520 aaPredicted RBP17.92■□□□□ 0.46
XRCC3-212ENST00000555231 TM4SF1P30408 202 aa17.91■□□□□ 0.46
XRCC3-212ENST00000555231 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
XRCC3-212ENST00000555231 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
XRCC3-212ENST00000555231 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
XRCC3-212ENST00000555231 SLC39A6Q13433 755 aa17.9■□□□□ 0.46
XRCC3-212ENST00000555231 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
XRCC3-212ENST00000555231 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
XRCC3-212ENST00000555231 ZPR1O75312 459 aa17.89■□□□□ 0.45
XRCC3-212ENST00000555231 SLC52A2Q9HAB3 445 aa17.89■□□□□ 0.45
XRCC3-212ENST00000555231 KNSTRNQ9Y448 316 aa17.89■□□□□ 0.45
XRCC3-212ENST00000555231 SOS1Q07889 1333 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms