RNA–Protein interactions for RNA: ENST00000555113.5

UBR7-205, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-205ENST00000555113 KIAA1551Q9HCM1 1747 aa28.67■■■□□ 2.18
UBR7-205ENST00000555113 ITPK1Q13572 414 aa28.67■■■□□ 2.18
UBR7-205ENST00000555113 N4BP2Q86UW6 1770 aaPredicted RBP28.67■■■□□ 2.18
UBR7-205ENST00000555113 POLKQ9UBT6 870 aa28.66■■■□□ 2.18
UBR7-205ENST00000555113 ATG3Q9NT62 314 aa28.64■■■□□ 2.18
UBR7-205ENST00000555113 KDRP35968 1356 aa28.63■■■□□ 2.17
UBR7-205ENST00000555113 MMP10P09238 476 aa28.62■■■□□ 2.17
UBR7-205ENST00000555113 EIF4A2Q14240 407 aaKnown RBP28.62■■■□□ 2.17
UBR7-205ENST00000555113 PXDNLA1KZ92 1463 aa28.61■■■□□ 2.17
UBR7-205ENST00000555113 HSPA6P17066 643 aa28.61■■■□□ 2.17
UBR7-205ENST00000555113 C4AP0C0L4 1744 aa28.6■■■□□ 2.17
UBR7-205ENST00000555113 BRCA1P38398 1863 aaKnown RBP28.6■■■□□ 2.17
UBR7-205ENST00000555113 RTCBQ9Y3I0 505 aaKnown RBP28.6■■■□□ 2.17
UBR7-205ENST00000555113 IFFO2Q5TF58 517 aa28.59■■■□□ 2.17
UBR7-205ENST00000555113 HSP90AB1P08238 724 aaKnown RBP28.58■■■□□ 2.17
UBR7-205ENST00000555113 TNNT2P45379 298 aaPredicted RBP28.58■■■□□ 2.17
UBR7-205ENST00000555113 POLR3GLQ9BT43 218 aa28.58■■■□□ 2.17
UBR7-205ENST00000555113 TIMELESSQ9UNS1 1208 aa28.58■■■□□ 2.17
UBR7-205ENST00000555113 MYH14Q7Z406 1995 aaKnown RBP28.57■■■□□ 2.16
UBR7-205ENST00000555113 ERVV-2B6SEH9 535 aa28.57■■■□□ 2.16
UBR7-205ENST00000555113 TRIM26Q12899 539 aaPredicted RBP28.57■■■□□ 2.16
UBR7-205ENST00000555113 TRAPPC3LQ5T215 181 aa28.57■■■□□ 2.16
UBR7-205ENST00000555113 C10orf71Q711Q0 1435 aa28.57■■■□□ 2.16
UBR7-205ENST00000555113 ADRA2BP18089 450 aa28.56■■■□□ 2.16
UBR7-205ENST00000555113 NLGN1Q8N2Q7 840 aa28.56■■■□□ 2.16
UBR7-205ENST00000555113 RBM42Q9BTD8 480 aaKnown RBP28.56■■■□□ 2.16
UBR7-205ENST00000555113 TGFB2P61812 414 aa28.55■■■□□ 2.16
UBR7-205ENST00000555113 DCAF5Q96JK2 942 aa28.55■■■□□ 2.16
UBR7-205ENST00000555113 CNTNAP4Q9C0A0 1308 aa28.54■■■□□ 2.16
UBR7-205ENST00000555113 ARFGEF1Q9Y6D6 1849 aa28.54■■■□□ 2.16
UBR7-205ENST00000555113 RC3H1Q5TC82 1133 aaKnown RBP28.53■■■□□ 2.16
UBR7-205ENST00000555113 KIF3CO14782 793 aa28.52■■■□□ 2.16
UBR7-205ENST00000555113 PLEKHO1Q53GL0 409 aaPredicted RBP28.52■■■□□ 2.16
UBR7-205ENST00000555113 SLC4A9Q96Q91 983 aa28.52■■■□□ 2.16
UBR7-205ENST00000555113 KDM6AO15550 1401 aaPredicted RBP28.52■■■□□ 2.16
UBR7-205ENST00000555113 CCDC87Q9NVE4 849 aa28.51■■■□□ 2.15
UBR7-205ENST00000555113 BCS1LQ9Y276 419 aa28.51■■■□□ 2.15
UBR7-205ENST00000555113 RFC4P35249 363 aa28.5■■■□□ 2.15
UBR7-205ENST00000555113 ZNF530Q6P9A1 599 aaPredicted RBP28.5■■■□□ 2.15
UBR7-205ENST00000555113 ARHGEF1Q92888 912 aaKnown RBP28.5■■■□□ 2.15
UBR7-205ENST00000555113 SCN11AQ9UI33 1791 aa28.48■■■□□ 2.15
UBR7-205ENST00000555113 A0A0G2JLW4 131 aa28.48■■■□□ 2.15
UBR7-205ENST00000555113 RPS6KA4O75676 772 aa28.48■■■□□ 2.15
UBR7-205ENST00000555113 GYS1P13807 737 aa28.48■■■□□ 2.15
UBR7-205ENST00000555113 CABP4P57796 275 aa28.48■■■□□ 2.15
UBR7-205ENST00000555113 AMOTQ4VCS5 1084 aa28.48■■■□□ 2.15
UBR7-205ENST00000555113 TJP1Q07157 1748 aa28.47■■■□□ 2.15
UBR7-205ENST00000555113 PARP3Q9Y6F1 533 aa28.47■■■□□ 2.15
UBR7-205ENST00000555113 C1orf141Q5JVX7 400 aa28.45■■■□□ 2.14
UBR7-205ENST00000555113 VIRMAQ69YN4 1812 aaKnown RBP28.45■■■□□ 2.14
UBR7-205ENST00000555113 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
UBR7-205ENST00000555113 DPEP1P16444 411 aa28.43■■■□□ 2.14
UBR7-205ENST00000555113 ARHGAP27Q6ZUM4 889 aa28.43■■■□□ 2.14
UBR7-205ENST00000555113 FCHSD2O94868 740 aa28.42■■■□□ 2.14
UBR7-205ENST00000555113 MTHFSP49914 203 aa28.42■■■□□ 2.14
UBR7-205ENST00000555113 PANK3Q9H999 370 aa28.41■■■□□ 2.14
UBR7-205ENST00000555113 PTCD1O75127 700 aaKnown RBP28.4■■■□□ 2.14
UBR7-205ENST00000555113 TOMM70O94826 608 aa28.4■■■□□ 2.14
UBR7-205ENST00000555113 APLP1P51693 650 aa28.39■■■□□ 2.14
UBR7-205ENST00000555113 EIF4G2P78344 907 aaKnown RBP eCLIP28.39■■■□□ 2.14
UBR7-205ENST00000555113 AEBP1Q8IUX7 1158 aa28.39■■■□□ 2.14
UBR7-205ENST00000555113 CRKLP46109 303 aaKnown RBP28.38■■■□□ 2.13
UBR7-205ENST00000555113 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
UBR7-205ENST00000555113 MORC1Q86VD1 984 aa28.37■■■□□ 2.13
UBR7-205ENST00000555113 ADAMTS7Q9UKP4 1686 aa28.37■■■□□ 2.13
UBR7-205ENST00000555113 SBF1O95248 1867 aa28.36■■■□□ 2.13
UBR7-205ENST00000555113 WDR90Q96KV7 1748 aa28.36■■■□□ 2.13
UBR7-205ENST00000555113 NFATC2IPQ8NCF5 419 aa28.36■■■□□ 2.13
UBR7-205ENST00000555113 PIM2Q9P1W9 311 aa28.35■■■□□ 2.13
UBR7-205ENST00000555113 HSPA5P11021 654 aaKnown RBP28.34■■■□□ 2.13
UBR7-205ENST00000555113 KCNA3P22001 575 aa28.34■■■□□ 2.13
UBR7-205ENST00000555113 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
UBR7-205ENST00000555113 NMRK2Q9NPI5 230 aa28.34■■■□□ 2.13
UBR7-205ENST00000555113 SRP68Q9UHB9 627 aaKnown RBP28.34■■■□□ 2.13
UBR7-205ENST00000555113 TNRC6CQ9HCJ0 1690 aaKnown RBP28.32■■■□□ 2.12
UBR7-205ENST00000555113 AFDNP55196 1824 aaKnown RBP28.32■■■□□ 2.12
UBR7-205ENST00000555113 FKBP8Q14318 412 aa28.32■■■□□ 2.12
UBR7-205ENST00000555113 C9orf131Q5VYM1 1079 aa28.32■■■□□ 2.12
UBR7-205ENST00000555113 DDR1Q08345 913 aa28.31■■■□□ 2.12
UBR7-205ENST00000555113 DALRD3Q5D0E6 543 aaKnown RBP28.31■■■□□ 2.12
UBR7-205ENST00000555113 MRC1P22897 1456 aa28.29■■■□□ 2.12
UBR7-205ENST00000555113 C16orf71Q8IYS4 520 aaPredicted RBP28.29■■■□□ 2.12
UBR7-205ENST00000555113 AKAP4Q5JQC9 854 aa28.28■■■□□ 2.12
UBR7-205ENST00000555113 RBM46Q8TBY0 533 aaKnown RBP28.28■■■□□ 2.12
UBR7-205ENST00000555113 PCGF6Q9BYE7 350 aa28.28■■■□□ 2.12
UBR7-205ENST00000555113 KNSTRNQ9Y448 316 aa28.28■■■□□ 2.12
UBR7-205ENST00000555113 DLEC1Q9Y238 1755 aa28.28■■■□□ 2.12
UBR7-205ENST00000555113 IL13P35225 146 aa28.27■■■□□ 2.12
UBR7-205ENST00000555113 KCPQ6ZWJ8 1503 aa28.27■■■□□ 2.12
UBR7-205ENST00000555113 KDM2BQ8NHM5 1336 aa28.26■■■□□ 2.11
UBR7-205ENST00000555113 ZPR1O75312 459 aa28.26■■■□□ 2.11
UBR7-205ENST00000555113 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
UBR7-205ENST00000555113 NRXN2Q9P2S2 1712 aa28.26■■■□□ 2.11
UBR7-205ENST00000555113 POLRMTO00411 1230 aaKnown RBP28.25■■■□□ 2.11
UBR7-205ENST00000555113 SLC52A2Q9HAB3 445 aa28.25■■■□□ 2.11
UBR7-205ENST00000555113 RNF181Q9P0P0 153 aa28.25■■■□□ 2.11
UBR7-205ENST00000555113 CHRNA5P30532 468 aa28.24■■■□□ 2.11
UBR7-205ENST00000555113 DNAJC10Q8IXB1 793 aa28.24■■■□□ 2.11
UBR7-205ENST00000555113 SOS1Q07889 1333 aaPredicted RBP28.23■■■□□ 2.11
UBR7-205ENST00000555113 UBR2Q8IWV8 1755 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms