RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 COL5A3P25940 1745 aaPredicted RBP20.76■□□□□ 0.91
XRCC3-210ENST00000554974 KDRP35968 1356 aa20.76■□□□□ 0.91
XRCC3-210ENST00000554974 ATP6V1AP38606 617 aa20.76■□□□□ 0.91
XRCC3-210ENST00000554974 ATG3Q9NT62 314 aa20.76■□□□□ 0.91
XRCC3-210ENST00000554974 TIMELESSQ9UNS1 1208 aa20.76■□□□□ 0.91
XRCC3-210ENST00000554974 ADCY9O60503 1353 aa20.75■□□□□ 0.91
XRCC3-210ENST00000554974 KIAA1551Q9HCM1 1747 aa20.74■□□□□ 0.91
XRCC3-210ENST00000554974 ZNF831Q5JPB2 1677 aa20.73■□□□□ 0.91
XRCC3-210ENST00000554974 CICQ96RK0 1608 aaPredicted RBP20.73■□□□□ 0.91
XRCC3-210ENST00000554974 KDM6AO15550 1401 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-210ENST00000554974 KIF13BQ9NQT8 1826 aa20.72■□□□□ 0.91
XRCC3-210ENST00000554974 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-210ENST00000554974 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-210ENST00000554974 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
XRCC3-210ENST00000554974 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
XRCC3-210ENST00000554974 MMP10P09238 476 aa20.71■□□□□ 0.91
XRCC3-210ENST00000554974 SLC4A9Q96Q91 983 aa20.71■□□□□ 0.91
XRCC3-210ENST00000554974 PANK3Q9H999 370 aa20.7■□□□□ 0.9
XRCC3-210ENST00000554974 GPBP1L1Q9HC44 474 aaPredicted RBP20.7■□□□□ 0.9
XRCC3-210ENST00000554974 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
XRCC3-210ENST00000554974 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
XRCC3-210ENST00000554974 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
XRCC3-210ENST00000554974 ZNF530Q6P9A1 599 aaPredicted RBP20.68■□□□□ 0.9
XRCC3-210ENST00000554974 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
XRCC3-210ENST00000554974 MYH14Q7Z406 1995 aaKnown RBP20.67■□□□□ 0.9
XRCC3-210ENST00000554974 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
XRCC3-210ENST00000554974 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
XRCC3-210ENST00000554974 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
XRCC3-210ENST00000554974 RTCBQ9Y3I0 505 aaKnown RBP20.67■□□□□ 0.9
XRCC3-210ENST00000554974 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
XRCC3-210ENST00000554974 TJP1Q07157 1748 aa20.65■□□□□ 0.9
XRCC3-210ENST00000554974 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
XRCC3-210ENST00000554974 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
XRCC3-210ENST00000554974 TRAPPC3LQ5T215 181 aa20.65■□□□□ 0.9
XRCC3-210ENST00000554974 CNTNAP4Q9C0A0 1308 aa20.64■□□□□ 0.89
XRCC3-210ENST00000554974 CABP4P57796 275 aa20.64■□□□□ 0.89
XRCC3-210ENST00000554974 BRCA1P38398 1863 aaKnown RBP20.63■□□□□ 0.89
XRCC3-210ENST00000554974 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
XRCC3-210ENST00000554974 ARHGEF1Q92888 912 aaKnown RBP20.63■□□□□ 0.89
XRCC3-210ENST00000554974 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
XRCC3-210ENST00000554974 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
XRCC3-210ENST00000554974 GYS1P13807 737 aa20.61■□□□□ 0.89
XRCC3-210ENST00000554974 ADRA2BP18089 450 aa20.61■□□□□ 0.89
XRCC3-210ENST00000554974 MTHFSP49914 203 aa20.61■□□□□ 0.89
XRCC3-210ENST00000554974 AMOTQ4VCS5 1084 aa20.61■□□□□ 0.89
XRCC3-210ENST00000554974 NLGN1Q8N2Q7 840 aa20.61■□□□□ 0.89
XRCC3-210ENST00000554974 A0A0G2JLW4 131 aa20.6■□□□□ 0.89
XRCC3-210ENST00000554974 RFC4P35249 363 aa20.6■□□□□ 0.89
XRCC3-210ENST00000554974 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
XRCC3-210ENST00000554974 RC3H1Q5TC82 1133 aaKnown RBP20.6■□□□□ 0.89
XRCC3-210ENST00000554974 SULT6B1Q6IMI4 303 aa20.6■□□□□ 0.89
XRCC3-210ENST00000554974 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
XRCC3-210ENST00000554974 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
XRCC3-210ENST00000554974 VIRMAQ69YN4 1812 aaKnown RBP20.58■□□□□ 0.89
XRCC3-210ENST00000554974 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
XRCC3-210ENST00000554974 DPEP1P16444 411 aa20.57■□□□□ 0.88
XRCC3-210ENST00000554974 CRKLP46109 303 aaKnown RBP20.57■□□□□ 0.88
XRCC3-210ENST00000554974 TGFB2P61812 414 aa20.57■□□□□ 0.88
XRCC3-210ENST00000554974 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
XRCC3-210ENST00000554974 ADAMTS7Q9UKP4 1686 aa20.57■□□□□ 0.88
XRCC3-210ENST00000554974 HSPA6P17066 643 aa20.56■□□□□ 0.88
XRCC3-210ENST00000554974 SRP68Q9UHB9 627 aaKnown RBP20.56■□□□□ 0.88
XRCC3-210ENST00000554974 PARP3Q9Y6F1 533 aa20.56■□□□□ 0.88
XRCC3-210ENST00000554974 ARFGEF1Q9Y6D6 1849 aa20.55■□□□□ 0.88
XRCC3-210ENST00000554974 KIF3CO14782 793 aa20.55■□□□□ 0.88
XRCC3-210ENST00000554974 IL13P35225 146 aa20.55■□□□□ 0.88
XRCC3-210ENST00000554974 KNSTRNQ9Y448 316 aa20.55■□□□□ 0.88
XRCC3-210ENST00000554974 USP42Q9H9J4 1324 aaKnown RBP20.53■□□□□ 0.88
XRCC3-210ENST00000554974 FCHSD2O94868 740 aa20.53■□□□□ 0.88
XRCC3-210ENST00000554974 FKBP8Q14318 412 aa20.53■□□□□ 0.88
XRCC3-210ENST00000554974 ARHGAP27Q6ZUM4 889 aa20.53■□□□□ 0.88
XRCC3-210ENST00000554974 MRC1P22897 1456 aa20.53■□□□□ 0.88
XRCC3-210ENST00000554974 DDR1Q08345 913 aa20.52■□□□□ 0.88
XRCC3-210ENST00000554974 AMER1Q5JTC6 1135 aaPredicted RBP20.51■□□□□ 0.87
XRCC3-210ENST00000554974 KCNA3P22001 575 aa20.5■□□□□ 0.87
XRCC3-210ENST00000554974 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
XRCC3-210ENST00000554974 KCPQ6ZWJ8 1503 aa20.49■□□□□ 0.87
XRCC3-210ENST00000554974 HMOX1P09601 288 aa20.49■□□□□ 0.87
XRCC3-210ENST00000554974 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
XRCC3-210ENST00000554974 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
XRCC3-210ENST00000554974 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
XRCC3-210ENST00000554974 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
XRCC3-210ENST00000554974 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
XRCC3-210ENST00000554974 SLC39A6Q13433 755 aa20.47■□□□□ 0.87
XRCC3-210ENST00000554974 NMRK2Q9NPI5 230 aa20.47■□□□□ 0.87
XRCC3-210ENST00000554974 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
XRCC3-210ENST00000554974 CHRNA5P30532 468 aa20.46■□□□□ 0.87
XRCC3-210ENST00000554974 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
XRCC3-210ENST00000554974 UBR2Q8IWV8 1755 aa20.46■□□□□ 0.87
XRCC3-210ENST00000554974 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
XRCC3-210ENST00000554974 C9orf131Q5VYM1 1079 aa20.45■□□□□ 0.86
XRCC3-210ENST00000554974 USPL1Q5W0Q7 1092 aa20.45■□□□□ 0.86
XRCC3-210ENST00000554974 PIM2Q9P1W9 311 aa20.45■□□□□ 0.86
XRCC3-210ENST00000554974 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
XRCC3-210ENST00000554974 DALRD3Q5D0E6 543 aaKnown RBP20.44■□□□□ 0.86
XRCC3-210ENST00000554974 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
XRCC3-210ENST00000554974 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
XRCC3-210ENST00000554974 COL15A1P39059 1388 aa20.43■□□□□ 0.86
XRCC3-210ENST00000554974 NRXN2Q9P2S2 1712 aa20.42■□□□□ 0.86
XRCC3-210ENST00000554974 DLEC1Q9Y238 1755 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms