RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 FKBP5Q13451 457 aaPredicted RBP8.8□□□□□ -1
FCF1-207ENST00000554973 ZBTB33Q86T24 672 aa8.8□□□□□ -1
FCF1-207ENST00000554973 DZIP3Q86Y13 1208 aaKnown RBP8.8□□□□□ -1
FCF1-207ENST00000554973 CITED4Q96RK1 184 aa8.8□□□□□ -1
FCF1-207ENST00000554973 TGIF2Q9GZN2 237 aa8.8□□□□□ -1
FCF1-207ENST00000554973 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
FCF1-207ENST00000554973 RNF20Q5VTR2 975 aa8.79□□□□□ -1
FCF1-207ENST00000554973 CAPN12Q6ZSI9 719 aa8.79□□□□□ -1
FCF1-207ENST00000554973 ARMC5Q96C12 935 aa8.79□□□□□ -1
FCF1-207ENST00000554973 TINF2Q9BSI4 451 aa8.79□□□□□ -1
FCF1-207ENST00000554973 LNPKQ9C0E8 428 aa8.79□□□□□ -1
FCF1-207ENST00000554973 PRKAG2Q9UGJ0 569 aa8.79□□□□□ -1
FCF1-207ENST00000554973 RNF223E7ERA6 249 aa8.78□□□□□ -1
FCF1-207ENST00000554973 NDUFB5O43674 189 aa8.78□□□□□ -1
FCF1-207ENST00000554973 PRPF40AO75400 957 aaKnown RBP8.78□□□□□ -1
FCF1-207ENST00000554973 ADH1BP00325 375 aa8.78□□□□□ -1
FCF1-207ENST00000554973 ATP2B1P20020 1258 aa8.78□□□□□ -1
FCF1-207ENST00000554973 USP4Q13107 963 aa8.78□□□□□ -1
FCF1-207ENST00000554973 RNF34Q969K3 372 aa8.78□□□□□ -1
FCF1-207ENST00000554973 THAP11Q96EK4 314 aa8.78□□□□□ -1
FCF1-207ENST00000554973 DNAJC2Q99543 621 aaKnown RBP8.78□□□□□ -1
FCF1-207ENST00000554973 MRS2Q9HD23 443 aa8.78□□□□□ -1
FCF1-207ENST00000554973 PARP2Q9UGN5 583 aa8.78□□□□□ -1
FCF1-207ENST00000554973 LGR5O75473 907 aa8.77□□□□□ -1.01
FCF1-207ENST00000554973 PLCB3Q01970 1234 aa8.77□□□□□ -1.01
FCF1-207ENST00000554973 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
FCF1-207ENST00000554973 SCUBE3Q8IX30 993 aa8.77□□□□□ -1.01
FCF1-207ENST00000554973 ANKLE1Q8NAG6 615 aa8.77□□□□□ -1.01
FCF1-207ENST00000554973 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
FCF1-207ENST00000554973 TMA7Q9Y2S6 64 aaKnown RBP8.77□□□□□ -1.01
FCF1-207ENST00000554973 SORBS3O60504 671 aa8.76□□□□□ -1.01
FCF1-207ENST00000554973 GIGYF1O75420 1035 aaPredicted RBP8.76□□□□□ -1.01
FCF1-207ENST00000554973 S1PR4O95977 384 aa8.76□□□□□ -1.01
FCF1-207ENST00000554973 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
FCF1-207ENST00000554973 SLC19A1P41440 591 aa8.76□□□□□ -1.01
FCF1-207ENST00000554973 DSC3Q14574 896 aa8.76□□□□□ -1.01
FCF1-207ENST00000554973 CCSER2Q9H7U1 834 aa8.76□□□□□ -1.01
FCF1-207ENST00000554973 CWC22Q9HCG8 908 aaKnown RBP8.76□□□□□ -1.01
FCF1-207ENST00000554973 TLDC2A0PJX2 215 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 DAB2P98082 770 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 FANCCQ00597 558 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 GNL2Q13823 731 aaKnown RBP8.75□□□□□ -1.01
FCF1-207ENST00000554973 NAA30Q147X3 362 aaPredicted RBP8.75□□□□□ -1.01
FCF1-207ENST00000554973 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
FCF1-207ENST00000554973 NUDT12Q9BQG2 462 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 SLC6A16Q9GZN6 736 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 CAPN10Q9HC96 672 aa8.75□□□□□ -1.01
FCF1-207ENST00000554973 FOXO3O43524 673 aa8.74□□□□□ -1.01
FCF1-207ENST00000554973 IGFBP4P22692 258 aa8.74□□□□□ -1.01
FCF1-207ENST00000554973 DHX38Q92620 1227 aaKnown RBP8.74□□□□□ -1.01
FCF1-207ENST00000554973 DMRTB1Q96MA1 342 aa8.74□□□□□ -1.01
FCF1-207ENST00000554973 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
FCF1-207ENST00000554973 GMLQ99445 158 aa8.74□□□□□ -1.01
FCF1-207ENST00000554973 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
FCF1-207ENST00000554973 PPEF1O14829 653 aaPredicted RBP8.73□□□□□ -1.01
FCF1-207ENST00000554973 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
FCF1-207ENST00000554973 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
FCF1-207ENST00000554973 ZNF662Q6ZS27 426 aa8.73□□□□□ -1.01
FCF1-207ENST00000554973 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
FCF1-207ENST00000554973 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.01
FCF1-207ENST00000554973 ZNF76P36508 570 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 MAPK8P45983 427 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 EHHADHQ08426 723 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 RBL2Q08999 1139 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 PSMD2Q13200 908 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 CCDC144BQ3MJ40 725 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 TMC1Q8TDI8 760 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
FCF1-207ENST00000554973 MPSTP25325 297 aa8.71□□□□□ -1.02
FCF1-207ENST00000554973 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
FCF1-207ENST00000554973 ALKBH2Q6NS38 261 aa8.71□□□□□ -1.02
FCF1-207ENST00000554973 SPSB2Q99619 263 aa8.71□□□□□ -1.02
FCF1-207ENST00000554973 VTI1BQ9UEU0 232 aa8.71□□□□□ -1.02
FCF1-207ENST00000554973 MMP16P51512 607 aa8.7□□□□□ -1.02
FCF1-207ENST00000554973 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
FCF1-207ENST00000554973 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
FCF1-207ENST00000554973 SOGA3Q5TF21 947 aa8.7□□□□□ -1.02
FCF1-207ENST00000554973 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
FCF1-207ENST00000554973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.7□□□□□ -1.02
FCF1-207ENST00000554973 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.7□□□□□ -1.02
FCF1-207ENST00000554973 SH3RF1Q7Z6J0 888 aa8.69□□□□□ -1.02
FCF1-207ENST00000554973 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
FCF1-207ENST00000554973 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
FCF1-207ENST00000554973 ACBD3Q9H3P7 528 aa8.69□□□□□ -1.02
FCF1-207ENST00000554973 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
FCF1-207ENST00000554973 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
FCF1-207ENST00000554973 IGHA2P01877 340 aa8.68□□□□□ -1.02
FCF1-207ENST00000554973 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
FCF1-207ENST00000554973 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
FCF1-207ENST00000554973 ALKBH8Q96BT7 664 aaKnown RBP8.68□□□□□ -1.02
FCF1-207ENST00000554973 FAM129BQ96TA1 746 aa8.68□□□□□ -1.02
FCF1-207ENST00000554973 ESPNB1AK53 854 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 FZD6O60353 706 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 ZNF697Q5TEC3 545 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 EGFLAMQ63HQ2 1017 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 SDE2Q6IQ49 451 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 C16orf46Q6P387 395 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 LIAT1Q6ZQX7 453 aa8.67□□□□□ -1.02
FCF1-207ENST00000554973 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms