RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 PLEKHG2Q9H7P9 1386 aa21.35■■□□□ 1.01
GABRB3-207ENST00000554722 LOC102724428A0A0B4J2F2 783 aa21.34■■□□□ 1.01
GABRB3-207ENST00000554722 GRIN3BO60391 1043 aa21.34■■□□□ 1.01
GABRB3-207ENST00000554722 SIK1P57059 783 aa21.34■■□□□ 1.01
GABRB3-207ENST00000554722 PLEKHO1Q53GL0 409 aaPredicted RBP21.34■■□□□ 1.01
GABRB3-207ENST00000554722 NPC1L1Q9UHC9 1359 aa21.34■■□□□ 1.01
GABRB3-207ENST00000554722 ZNF530Q6P9A1 599 aaPredicted RBP21.33■■□□□ 1.01
GABRB3-207ENST00000554722 CD2APQ9Y5K6 639 aa21.33■■□□□ 1.01
GABRB3-207ENST00000554722 SMIM5Q71RC9 77 aa21.32■■□□□ 1
GABRB3-207ENST00000554722 AMIGO3Q86WK7 504 aa21.32■■□□□ 1
GABRB3-207ENST00000554722 ATG3Q9NT62 314 aa21.32■■□□□ 1
GABRB3-207ENST00000554722 COL3A1P02461 1466 aaPredicted RBP21.32■■□□□ 1
GABRB3-207ENST00000554722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.31■■□□□ 1
GABRB3-207ENST00000554722 PHF14O94880 888 aa21.31■■□□□ 1
GABRB3-207ENST00000554722 SSFA2P28290 1259 aa21.31■■□□□ 1
GABRB3-207ENST00000554722 HMOX1P09601 288 aa21.3■■□□□ 1
GABRB3-207ENST00000554722 AMOTQ4VCS5 1084 aa21.3■■□□□ 1
GABRB3-207ENST00000554722 YBX3P16989 372 aaKnown RBP eCLIP21.29■■□□□ 1
GABRB3-207ENST00000554722 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
GABRB3-207ENST00000554722 HSP90AB1P08238 724 aaKnown RBP21.28■■□□□ 1
GABRB3-207ENST00000554722 ATP6V1AP38606 617 aa21.28■■□□□ 1
GABRB3-207ENST00000554722 ITPK1Q13572 414 aa21.28■■□□□ 1
GABRB3-207ENST00000554722 DCAF5Q96JK2 942 aa21.28■■□□□ 1
GABRB3-207ENST00000554722 COL5A3P25940 1745 aaPredicted RBP21.27■■□□□ 1
GABRB3-207ENST00000554722 ERVV-2B6SEH9 535 aa21.27■■□□□ 1
GABRB3-207ENST00000554722 DIAPH1O60610 1272 aaKnown RBP21.27■■□□□ 1
GABRB3-207ENST00000554722 SLC4A9Q96Q91 983 aa21.27■■□□□ 1
GABRB3-207ENST00000554722 MYH14Q7Z406 1995 aaKnown RBP21.27■□□□□ 0.99
GABRB3-207ENST00000554722 ZNF831Q5JPB2 1677 aa21.26■□□□□ 0.99
GABRB3-207ENST00000554722 GNPATO15228 680 aa21.26■□□□□ 0.99
GABRB3-207ENST00000554722 C1QTNF8P60827 252 aa21.26■□□□□ 0.99
GABRB3-207ENST00000554722 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
GABRB3-207ENST00000554722 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
GABRB3-207ENST00000554722 CABP4P57796 275 aa21.23■□□□□ 0.99
GABRB3-207ENST00000554722 LGR6Q9HBX8 967 aa21.23■□□□□ 0.99
GABRB3-207ENST00000554722 ADAMTS7Q9UKP4 1686 aa21.23■□□□□ 0.99
GABRB3-207ENST00000554722 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
GABRB3-207ENST00000554722 NFATC2IPQ8NCF5 419 aa21.22■□□□□ 0.99
GABRB3-207ENST00000554722 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
GABRB3-207ENST00000554722 TJP1Q07157 1748 aa21.21■□□□□ 0.99
GABRB3-207ENST00000554722 SENP3-EIF4A1A0A087X0R7 540 aa21.21■□□□□ 0.99
GABRB3-207ENST00000554722 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
GABRB3-207ENST00000554722 RTCBQ9Y3I0 505 aaKnown RBP21.2■□□□□ 0.98
GABRB3-207ENST00000554722 U2SURPO15042 1029 aaKnown RBP21.19■□□□□ 0.98
GABRB3-207ENST00000554722 TRAPPC3LQ5T215 181 aa21.19■□□□□ 0.98
GABRB3-207ENST00000554722 PPP2R1AP30153 589 aa21.18■□□□□ 0.98
GABRB3-207ENST00000554722 RC3H1Q5TC82 1133 aaKnown RBP21.18■□□□□ 0.98
GABRB3-207ENST00000554722 RNMTO43148 476 aaKnown RBP21.17■□□□□ 0.98
GABRB3-207ENST00000554722 MMP10P09238 476 aa21.17■□□□□ 0.98
GABRB3-207ENST00000554722 ADRA2BP18089 450 aa21.17■□□□□ 0.98
GABRB3-207ENST00000554722 MRC1P22897 1456 aa21.17■□□□□ 0.98
GABRB3-207ENST00000554722 C4AP0C0L4 1744 aa21.16■□□□□ 0.98
GABRB3-207ENST00000554722 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
GABRB3-207ENST00000554722 NLGN1Q8N2Q7 840 aa21.16■□□□□ 0.98
GABRB3-207ENST00000554722 SIPA1L3O60292 1781 aaPredicted RBP21.15■□□□□ 0.98
GABRB3-207ENST00000554722 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
GABRB3-207ENST00000554722 CNTNAP4Q9C0A0 1308 aa21.15■□□□□ 0.98
GABRB3-207ENST00000554722 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
GABRB3-207ENST00000554722 ATP10DQ9P241 1426 aa21.14■□□□□ 0.98
GABRB3-207ENST00000554722 WWC3Q9ULE0 1092 aa21.14■□□□□ 0.97
GABRB3-207ENST00000554722 RPS6KA4O75676 772 aa21.13■□□□□ 0.97
GABRB3-207ENST00000554722 RFC4P35249 363 aa21.13■□□□□ 0.97
GABRB3-207ENST00000554722 SLC39A6Q13433 755 aa21.13■□□□□ 0.97
GABRB3-207ENST00000554722 ARHGEF1Q92888 912 aaKnown RBP21.13■□□□□ 0.97
GABRB3-207ENST00000554722 UBR2Q8IWV8 1755 aa21.13■□□□□ 0.97
GABRB3-207ENST00000554722 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
GABRB3-207ENST00000554722 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
GABRB3-207ENST00000554722 KCPQ6ZWJ8 1503 aa21.1■□□□□ 0.97
GABRB3-207ENST00000554722 TGFB2P61812 414 aa21.1■□□□□ 0.97
GABRB3-207ENST00000554722 CFAP53Q96M91 514 aa21.1■□□□□ 0.97
GABRB3-207ENST00000554722 GPBP1L1Q9HC44 474 aaPredicted RBP21.1■□□□□ 0.97
GABRB3-207ENST00000554722 ADCY9O60503 1353 aa21.1■□□□□ 0.97
GABRB3-207ENST00000554722 GYS1P13807 737 aa21.09■□□□□ 0.97
GABRB3-207ENST00000554722 IL17REQ8NFR9 667 aa21.09■□□□□ 0.97
GABRB3-207ENST00000554722 PRKAR2BP31323 418 aa21.08■□□□□ 0.97
GABRB3-207ENST00000554722 CCDC87Q9NVE4 849 aa21.08■□□□□ 0.97
GABRB3-207ENST00000554722 PARP3Q9Y6F1 533 aa21.08■□□□□ 0.97
GABRB3-207ENST00000554722 DLG5Q8TDM6 1919 aa21.08■□□□□ 0.96
GABRB3-207ENST00000554722 CRKLP46109 303 aaKnown RBP21.07■□□□□ 0.96
GABRB3-207ENST00000554722 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
GABRB3-207ENST00000554722 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
GABRB3-207ENST00000554722 C10orf71Q711Q0 1435 aa21.06■□□□□ 0.96
GABRB3-207ENST00000554722 CEP350Q5VT06 3117 aa21.06■□□□□ 0.96
GABRB3-207ENST00000554722 GAS2L2Q8NHY3 880 aa21.06■□□□□ 0.96
GABRB3-207ENST00000554722 KIF13BQ9NQT8 1826 aa21.06■□□□□ 0.96
GABRB3-207ENST00000554722 GNAT3A8MTJ3 354 aa21.05■□□□□ 0.96
GABRB3-207ENST00000554722 U2AF1L5P0DN76 240 aaPredicted RBP21.05■□□□□ 0.96
GABRB3-207ENST00000554722 U2AF1Q01081 240 aaKnown RBP eCLIP21.05■□□□□ 0.96
GABRB3-207ENST00000554722 INTS5Q6P9B9 1019 aaKnown RBP21.05■□□□□ 0.96
GABRB3-207ENST00000554722 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
GABRB3-207ENST00000554722 KIAA1551Q9HCM1 1747 aa21.04■□□□□ 0.96
GABRB3-207ENST00000554722 A0A0G2JLW4 131 aa21.04■□□□□ 0.96
GABRB3-207ENST00000554722 NUDCQ9Y266 331 aa21.04■□□□□ 0.96
GABRB3-207ENST00000554722 BCS1LQ9Y276 419 aa21.04■□□□□ 0.96
GABRB3-207ENST00000554722 N4BP2Q86UW6 1770 aaPredicted RBP21.04■□□□□ 0.96
GABRB3-207ENST00000554722 SRP68Q9UHB9 627 aaKnown RBP21.02■□□□□ 0.96
GABRB3-207ENST00000554722 USP42Q9H9J4 1324 aaKnown RBP21.02■□□□□ 0.95
GABRB3-207ENST00000554722 CYP19A1P11511 503 aaPredicted RBP21.01■□□□□ 0.95
GABRB3-207ENST00000554722 DPEP1P16444 411 aa21.01■□□□□ 0.95
GABRB3-207ENST00000554722 CEMIPQ8WUJ3 1361 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms