RNA–Protein interactions for RNA: ENST00000554497.1

TMEM30B-201, Transcript of transmembrane protein 30B, humanhuman

TSL 4

Gene TMEM30B, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-201ENST00000554497 AMPHP49418 695 aa17.55■□□□□ 0.4
TMEM30B-201ENST00000554497 PCDH11XQ9BZA7 1347 aa17.54■□□□□ 0.4
TMEM30B-201ENST00000554497 PCDH11YQ9BZA8 1340 aa17.54■□□□□ 0.4
TMEM30B-201ENST00000554497 SMC1BQ8NDV3 1235 aa17.54■□□□□ 0.4
TMEM30B-201ENST00000554497 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
TMEM30B-201ENST00000554497 GNPATO15228 680 aa17.53■□□□□ 0.4
TMEM30B-201ENST00000554497 CYP27B1O15528 508 aa17.52■□□□□ 0.4
TMEM30B-201ENST00000554497 TATP17735 454 aaPredicted RBP17.52■□□□□ 0.4
TMEM30B-201ENST00000554497 LOC102724428A0A0B4J2F2 783 aa17.51■□□□□ 0.39
TMEM30B-201ENST00000554497 SBF1O95248 1867 aa17.51■□□□□ 0.39
TMEM30B-201ENST00000554497 SIK1P57059 783 aa17.51■□□□□ 0.39
TMEM30B-201ENST00000554497 PIGBQ92521 554 aa17.51■□□□□ 0.39
TMEM30B-201ENST00000554497 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
TMEM30B-201ENST00000554497 ITPK1Q13572 414 aa17.5■□□□□ 0.39
TMEM30B-201ENST00000554497 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
TMEM30B-201ENST00000554497 KCNA3P22001 575 aa17.49■□□□□ 0.39
TMEM30B-201ENST00000554497 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
TMEM30B-201ENST00000554497 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
TMEM30B-201ENST00000554497 COG3Q96JB2 828 aa17.48■□□□□ 0.39
TMEM30B-201ENST00000554497 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
TMEM30B-201ENST00000554497 CCDC87Q9NVE4 849 aa17.47■□□□□ 0.39
TMEM30B-201ENST00000554497 TMF1P82094 1093 aa17.46■□□□□ 0.39
TMEM30B-201ENST00000554497 RRS1Q15050 365 aaKnown RBP17.46■□□□□ 0.39
TMEM30B-201ENST00000554497 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
TMEM30B-201ENST00000554497 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
TMEM30B-201ENST00000554497 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
TMEM30B-201ENST00000554497 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
TMEM30B-201ENST00000554497 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
TMEM30B-201ENST00000554497 ASAP1Q9ULH1 1129 aa17.44■□□□□ 0.38
TMEM30B-201ENST00000554497 ST20-MTHFSA0A0A6YYL1 179 aa17.42■□□□□ 0.38
TMEM30B-201ENST00000554497 GYS1P13807 737 aa17.42■□□□□ 0.38
TMEM30B-201ENST00000554497 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
TMEM30B-201ENST00000554497 TRAPPC3LQ5T215 181 aa17.42■□□□□ 0.38
TMEM30B-201ENST00000554497 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
TMEM30B-201ENST00000554497 PARP3Q9Y6F1 533 aa17.42■□□□□ 0.38
TMEM30B-201ENST00000554497 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
TMEM30B-201ENST00000554497 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
TMEM30B-201ENST00000554497 FOXN1O15353 648 aa17.4■□□□□ 0.38
TMEM30B-201ENST00000554497 HSP90AB2PQ58FF8 381 aa17.4■□□□□ 0.38
TMEM30B-201ENST00000554497 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
TMEM30B-201ENST00000554497 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
TMEM30B-201ENST00000554497 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.37
TMEM30B-201ENST00000554497 RASSF7Q02833 373 aa17.39■□□□□ 0.37
TMEM30B-201ENST00000554497 INSRP06213 1382 aa17.39■□□□□ 0.37
TMEM30B-201ENST00000554497 KDRP35968 1356 aa17.39■□□□□ 0.37
TMEM30B-201ENST00000554497 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
TMEM30B-201ENST00000554497 CHRNA5P30532 468 aa17.38■□□□□ 0.37
TMEM30B-201ENST00000554497 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
TMEM30B-201ENST00000554497 PCDH10Q9P2E7 1040 aa17.38■□□□□ 0.37
TMEM30B-201ENST00000554497 ZC3H4Q9UPT8 1303 aaKnown RBP17.38■□□□□ 0.37
TMEM30B-201ENST00000554497 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
TMEM30B-201ENST00000554497 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 GLTPD2A6NH11 291 aa17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 ADRA2BP18089 450 aa17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 FAM161AQ3B820 660 aa17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 SLC4A9Q96Q91 983 aa17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 MKRN1Q9UHC7 482 aaKnown RBP17.37■□□□□ 0.37
TMEM30B-201ENST00000554497 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
TMEM30B-201ENST00000554497 CCDC88AQ3V6T2 1871 aa17.36■□□□□ 0.37
TMEM30B-201ENST00000554497 RFC4P35249 363 aa17.36■□□□□ 0.37
TMEM30B-201ENST00000554497 TESK2Q96S53 571 aa17.36■□□□□ 0.37
TMEM30B-201ENST00000554497 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
TMEM30B-201ENST00000554497 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
TMEM30B-201ENST00000554497 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 FLT4P35916 1363 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 DDR1Q08345 913 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
TMEM30B-201ENST00000554497 POTECB2RU33 542 aa17.33■□□□□ 0.36
TMEM30B-201ENST00000554497 RC3H1Q5TC82 1133 aaKnown RBP17.33■□□□□ 0.36
TMEM30B-201ENST00000554497 CREBZFQ9NS37 354 aa17.33■□□□□ 0.36
TMEM30B-201ENST00000554497 FYB1O15117 783 aa17.32■□□□□ 0.36
TMEM30B-201ENST00000554497 LMNB1P20700 586 aa17.32■□□□□ 0.36
TMEM30B-201ENST00000554497 FKBP8Q14318 412 aa17.31■□□□□ 0.36
TMEM30B-201ENST00000554497 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
TMEM30B-201ENST00000554497 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
TMEM30B-201ENST00000554497 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
TMEM30B-201ENST00000554497 CTCFP49711 727 aaPredicted RBP17.3■□□□□ 0.36
TMEM30B-201ENST00000554497 CNTNAP1P78357 1384 aa17.29■□□□□ 0.36
TMEM30B-201ENST00000554497 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
TMEM30B-201ENST00000554497 PHKG2P15735 406 aa17.29■□□□□ 0.36
TMEM30B-201ENST00000554497 ABHD8Q96I13 439 aa17.29■□□□□ 0.36
TMEM30B-201ENST00000554497 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
TMEM30B-201ENST00000554497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.36
TMEM30B-201ENST00000554497 USP42Q9H9J4 1324 aaKnown RBP17.27■□□□□ 0.36
TMEM30B-201ENST00000554497 KIF20BQ96Q89 1820 aa17.27■□□□□ 0.36
TMEM30B-201ENST00000554497 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
TMEM30B-201ENST00000554497 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
TMEM30B-201ENST00000554497 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.35
TMEM30B-201ENST00000554497 LBX1P52954 281 aa17.26■□□□□ 0.35
TMEM30B-201ENST00000554497 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
TMEM30B-201ENST00000554497 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
TMEM30B-201ENST00000554497 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
TMEM30B-201ENST00000554497 NFKBIEO00221 500 aa17.25■□□□□ 0.35
TMEM30B-201ENST00000554497 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
TMEM30B-201ENST00000554497 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms