RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ERVV-2B6SEH9 535 aa29.91■■■□□ 2.38
RCCD1-202ENST00000554302 ITPK1Q13572 414 aa29.91■■■□□ 2.38
RCCD1-202ENST00000554302 AMER1Q5JTC6 1135 aaPredicted RBP29.91■■■□□ 2.38
RCCD1-202ENST00000554302 PLEKHO1Q53GL0 409 aaPredicted RBP29.9■■■□□ 2.38
RCCD1-202ENST00000554302 KIF7Q2M1P5 1343 aa29.9■■■□□ 2.38
RCCD1-202ENST00000554302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.89■■■□□ 2.38
RCCD1-202ENST00000554302 HSP90AB1P08238 724 aaKnown RBP29.89■■■□□ 2.38
RCCD1-202ENST00000554302 SSFA2P28290 1259 aa29.89■■■□□ 2.38
RCCD1-202ENST00000554302 AMOTQ4VCS5 1084 aa29.89■■■□□ 2.38
RCCD1-202ENST00000554302 DCAF5Q96JK2 942 aa29.89■■■□□ 2.38
RCCD1-202ENST00000554302 KDRP35968 1356 aa29.89■■■□□ 2.37
RCCD1-202ENST00000554302 ZNF831Q5JPB2 1677 aa29.88■■■□□ 2.37
RCCD1-202ENST00000554302 ATP6V1AP38606 617 aa29.87■■■□□ 2.37
RCCD1-202ENST00000554302 SMIM5Q71RC9 77 aa29.87■■■□□ 2.37
RCCD1-202ENST00000554302 AEBP1Q8IUX7 1158 aa29.87■■■□□ 2.37
RCCD1-202ENST00000554302 CD2APQ9Y5K6 639 aa29.87■■■□□ 2.37
RCCD1-202ENST00000554302 KDM6AO15550 1401 aaPredicted RBP29.87■■■□□ 2.37
RCCD1-202ENST00000554302 PHF14O94880 888 aa29.85■■■□□ 2.37
RCCD1-202ENST00000554302 IL13P35225 146 aa29.85■■■□□ 2.37
RCCD1-202ENST00000554302 ZNF530Q6P9A1 599 aaPredicted RBP29.84■■■□□ 2.37
RCCD1-202ENST00000554302 SLC4A9Q96Q91 983 aa29.84■■■□□ 2.37
RCCD1-202ENST00000554302 PER1O15534 1290 aaPredicted RBP29.82■■■□□ 2.36
RCCD1-202ENST00000554302 YBX3P16989 372 aaKnown RBP eCLIP29.82■■■□□ 2.36
RCCD1-202ENST00000554302 GNPATO15228 680 aa29.81■■■□□ 2.36
RCCD1-202ENST00000554302 SULT6B1Q6IMI4 303 aa29.81■■■□□ 2.36
RCCD1-202ENST00000554302 PELP1Q8IZL8 1130 aaKnown RBP29.81■■■□□ 2.36
RCCD1-202ENST00000554302 RNF216Q9NWF9 866 aaPredicted RBP29.81■■■□□ 2.36
RCCD1-202ENST00000554302 COL5A3P25940 1745 aaPredicted RBP29.79■■■□□ 2.36
RCCD1-202ENST00000554302 GRIN3BO60391 1043 aa29.78■■■□□ 2.36
RCCD1-202ENST00000554302 MTHFSP49914 203 aa29.78■■■□□ 2.36
RCCD1-202ENST00000554302 CABP4P57796 275 aa29.77■■■□□ 2.36
RCCD1-202ENST00000554302 C1orf141Q5JVX7 400 aa29.76■■■□□ 2.35
RCCD1-202ENST00000554302 RC3H1Q5TC82 1133 aaKnown RBP29.76■■■□□ 2.35
RCCD1-202ENST00000554302 RBM42Q9BTD8 480 aaKnown RBP29.75■■■□□ 2.35
RCCD1-202ENST00000554302 CNTNAP4Q9C0A0 1308 aa29.73■■■□□ 2.35
RCCD1-202ENST00000554302 RTCBQ9Y3I0 505 aaKnown RBP29.73■■■□□ 2.35
RCCD1-202ENST00000554302 NFATC2IPQ8NCF5 419 aa29.72■■■□□ 2.35
RCCD1-202ENST00000554302 SCN11AQ9UI33 1791 aa29.72■■■□□ 2.35
RCCD1-202ENST00000554302 TRAPPC3LQ5T215 181 aa29.71■■■□□ 2.35
RCCD1-202ENST00000554302 CICQ96RK0 1608 aaPredicted RBP29.71■■■□□ 2.35
RCCD1-202ENST00000554302 NPC1L1Q9UHC9 1359 aa29.69■■■□□ 2.34
RCCD1-202ENST00000554302 AKAP4Q5JQC9 854 aa29.69■■■□□ 2.34
RCCD1-202ENST00000554302 RPS6KA4O75676 772 aa29.68■■■□□ 2.34
RCCD1-202ENST00000554302 ARHGEF1Q92888 912 aaKnown RBP29.68■■■□□ 2.34
RCCD1-202ENST00000554302 MYH14Q7Z406 1995 aaKnown RBP29.68■■■□□ 2.34
RCCD1-202ENST00000554302 MMP10P09238 476 aa29.66■■■□□ 2.34
RCCD1-202ENST00000554302 CC2D1BQ5T0F9 858 aaKnown RBP29.66■■■□□ 2.34
RCCD1-202ENST00000554302 TJP1Q07157 1748 aa29.65■■■□□ 2.34
RCCD1-202ENST00000554302 PTCD1O75127 700 aaKnown RBP29.65■■■□□ 2.34
RCCD1-202ENST00000554302 NLGN1Q8N2Q7 840 aa29.65■■■□□ 2.34
RCCD1-202ENST00000554302 KIF13BQ9NQT8 1826 aa29.64■■■□□ 2.34
RCCD1-202ENST00000554302 MRC1P22897 1456 aa29.64■■■□□ 2.34
RCCD1-202ENST00000554302 ADAMTS7Q9UKP4 1686 aa29.63■■■□□ 2.33
RCCD1-202ENST00000554302 DIAPH1O60610 1272 aaKnown RBP29.63■■■□□ 2.33
RCCD1-202ENST00000554302 HMOX1P09601 288 aa29.63■■■□□ 2.33
RCCD1-202ENST00000554302 GYS1P13807 737 aa29.63■■■□□ 2.33
RCCD1-202ENST00000554302 LGR6Q9HBX8 967 aa29.63■■■□□ 2.33
RCCD1-202ENST00000554302 C4AP0C0L4 1744 aa29.62■■■□□ 2.33
RCCD1-202ENST00000554302 COL3A1P02461 1466 aaPredicted RBP29.62■■■□□ 2.33
RCCD1-202ENST00000554302 SLC52A2Q9HAB3 445 aa29.62■■■□□ 2.33
RCCD1-202ENST00000554302 C1QTNF8P60827 252 aa29.61■■■□□ 2.33
RCCD1-202ENST00000554302 KIAA1551Q9HCM1 1747 aa29.61■■■□□ 2.33
RCCD1-202ENST00000554302 RFC4P35249 363 aa29.6■■■□□ 2.33
RCCD1-202ENST00000554302 CRKLP46109 303 aaKnown RBP29.6■■■□□ 2.33
RCCD1-202ENST00000554302 RNMTO43148 476 aaKnown RBP29.59■■■□□ 2.33
RCCD1-202ENST00000554302 MTHFSDQ2M296 383 aaKnown RBP29.59■■■□□ 2.33
RCCD1-202ENST00000554302 PXDNLA1KZ92 1463 aa29.58■■■□□ 2.33
RCCD1-202ENST00000554302 C10orf71Q711Q0 1435 aa29.58■■■□□ 2.33
RCCD1-202ENST00000554302 VIRMAQ69YN4 1812 aaKnown RBP29.57■■■□□ 2.32
RCCD1-202ENST00000554302 ADCY9O60503 1353 aa29.56■■■□□ 2.32
RCCD1-202ENST00000554302 TGFB2P61812 414 aa29.56■■■□□ 2.32
RCCD1-202ENST00000554302 INTS5Q6P9B9 1019 aaKnown RBP29.56■■■□□ 2.32
RCCD1-202ENST00000554302 GIGYF1O75420 1035 aaPredicted RBP29.54■■■□□ 2.32
RCCD1-202ENST00000554302 KCPQ6ZWJ8 1503 aa29.54■■■□□ 2.32
RCCD1-202ENST00000554302 ATP10DQ9P241 1426 aa29.54■■■□□ 2.32
RCCD1-202ENST00000554302 USP42Q9H9J4 1324 aaKnown RBP29.53■■■□□ 2.32
RCCD1-202ENST00000554302 WWC3Q9ULE0 1092 aa29.53■■■□□ 2.32
RCCD1-202ENST00000554302 DNAJC10Q8IXB1 793 aa29.52■■■□□ 2.32
RCCD1-202ENST00000554302 SLC39A6Q13433 755 aa29.51■■■□□ 2.31
RCCD1-202ENST00000554302 CCDC87Q9NVE4 849 aa29.51■■■□□ 2.31
RCCD1-202ENST00000554302 N4BP2Q86UW6 1770 aaPredicted RBP29.51■■■□□ 2.31
RCCD1-202ENST00000554302 HOXD11P31277 338 aaPredicted RBP29.5■■■□□ 2.31
RCCD1-202ENST00000554302 SRP68Q9UHB9 627 aaKnown RBP29.5■■■□□ 2.31
RCCD1-202ENST00000554302 PARP3Q9Y6F1 533 aa29.5■■■□□ 2.31
RCCD1-202ENST00000554302 CYP19A1P11511 503 aaPredicted RBP29.49■■■□□ 2.31
RCCD1-202ENST00000554302 FKBP8Q14318 412 aa29.48■■■□□ 2.31
RCCD1-202ENST00000554302 UBR2Q8IWV8 1755 aa29.48■■■□□ 2.31
RCCD1-202ENST00000554302 SOS1Q07889 1333 aaPredicted RBP29.47■■■□□ 2.31
RCCD1-202ENST00000554302 A0A0G2JLW4 131 aa29.47■■■□□ 2.31
RCCD1-202ENST00000554302 VSIG10Q8N0Z9 540 aa29.47■■■□□ 2.31
RCCD1-202ENST00000554302 BRCA1P38398 1863 aaKnown RBP29.46■■■□□ 2.31
RCCD1-202ENST00000554302 U2SURPO15042 1029 aaKnown RBP29.45■■■□□ 2.31
RCCD1-202ENST00000554302 DDR1Q08345 913 aa29.45■■■□□ 2.31
RCCD1-202ENST00000554302 CNGB1Q14028 1251 aaPredicted RBP29.45■■■□□ 2.31
RCCD1-202ENST00000554302 DPEP1P16444 411 aa29.44■■■□□ 2.3
RCCD1-202ENST00000554302 KCNA3P22001 575 aa29.44■■■□□ 2.3
RCCD1-202ENST00000554302 TM4SF1P30408 202 aa29.44■■■□□ 2.3
RCCD1-202ENST00000554302 SENP3-EIF4A1A0A087X0R7 540 aa29.43■■■□□ 2.3
RCCD1-202ENST00000554302 GAS2L2Q8NHY3 880 aa29.43■■■□□ 2.3
RCCD1-202ENST00000554302 IL17REQ8NFR9 667 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms