RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
NEDD1-206ENST00000554226 TMF1P82094 1093 aa19.39■□□□□ 0.69
NEDD1-206ENST00000554226 ITPK1Q13572 414 aa19.39■□□□□ 0.69
NEDD1-206ENST00000554226 NMRK2Q9NPI5 230 aa19.39■□□□□ 0.69
NEDD1-206ENST00000554226 KDRP35968 1356 aa19.39■□□□□ 0.69
NEDD1-206ENST00000554226 GNPATO15228 680 aa19.38■□□□□ 0.69
NEDD1-206ENST00000554226 MMP10P09238 476 aa19.38■□□□□ 0.69
NEDD1-206ENST00000554226 C4AP0C0L4 1744 aa19.38■□□□□ 0.69
NEDD1-206ENST00000554226 RBM46Q8TBY0 533 aaKnown RBP19.37■□□□□ 0.69
NEDD1-206ENST00000554226 TMOD3Q9NYL9 352 aa19.37■□□□□ 0.69
NEDD1-206ENST00000554226 BCS1LQ9Y276 419 aa19.37■□□□□ 0.69
NEDD1-206ENST00000554226 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
NEDD1-206ENST00000554226 COL13A1Q5TAT6 717 aaPredicted RBP19.36■□□□□ 0.69
NEDD1-206ENST00000554226 JMYQ8N9B5 988 aa19.36■□□□□ 0.69
NEDD1-206ENST00000554226 KLRG1Q96E93 195 aa19.36■□□□□ 0.69
NEDD1-206ENST00000554226 ASAP1Q9ULH1 1129 aa19.36■□□□□ 0.69
NEDD1-206ENST00000554226 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
NEDD1-206ENST00000554226 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
NEDD1-206ENST00000554226 NLGN1Q8N2Q7 840 aa19.35■□□□□ 0.69
NEDD1-206ENST00000554226 A0A0G2JLW4 131 aa19.34■□□□□ 0.69
NEDD1-206ENST00000554226 PHKG2P15735 406 aa19.34■□□□□ 0.69
NEDD1-206ENST00000554226 ADRA2BP18089 450 aa19.34■□□□□ 0.69
NEDD1-206ENST00000554226 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
NEDD1-206ENST00000554226 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
NEDD1-206ENST00000554226 ATG3Q9NT62 314 aa19.34■□□□□ 0.69
NEDD1-206ENST00000554226 ARHGAP27Q6ZUM4 889 aa19.33■□□□□ 0.68
NEDD1-206ENST00000554226 CARD14Q9BXL6 1004 aa19.33■□□□□ 0.68
NEDD1-206ENST00000554226 HTRA3P83110 453 aa19.32■□□□□ 0.68
NEDD1-206ENST00000554226 RC3H1Q5TC82 1133 aaKnown RBP19.32■□□□□ 0.68
NEDD1-206ENST00000554226 EYA1Q99502 592 aa19.32■□□□□ 0.68
NEDD1-206ENST00000554226 CNTNAP4Q9C0A0 1308 aa19.31■□□□□ 0.68
NEDD1-206ENST00000554226 FSTL1Q12841 308 aa19.31■□□□□ 0.68
NEDD1-206ENST00000554226 TRAPPC3LQ5T215 181 aa19.31■□□□□ 0.68
NEDD1-206ENST00000554226 RTCBQ9Y3I0 505 aaKnown RBP19.31■□□□□ 0.68
NEDD1-206ENST00000554226 MYH14Q7Z406 1995 aaKnown RBP19.31■□□□□ 0.68
NEDD1-206ENST00000554226 FCHSD2O94868 740 aa19.3■□□□□ 0.68
NEDD1-206ENST00000554226 DPEP1P16444 411 aa19.3■□□□□ 0.68
NEDD1-206ENST00000554226 GYS1P13807 737 aa19.29■□□□□ 0.68
NEDD1-206ENST00000554226 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
NEDD1-206ENST00000554226 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
NEDD1-206ENST00000554226 SLC4A9Q96Q91 983 aa19.29■□□□□ 0.68
NEDD1-206ENST00000554226 CCDC87Q9NVE4 849 aa19.29■□□□□ 0.68
NEDD1-206ENST00000554226 TNRC6CQ9HCJ0 1690 aaKnown RBP19.29■□□□□ 0.68
NEDD1-206ENST00000554226 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
NEDD1-206ENST00000554226 ARHGEF1Q92888 912 aaKnown RBP19.28■□□□□ 0.68
NEDD1-206ENST00000554226 KCPQ6ZWJ8 1503 aa19.27■□□□□ 0.68
NEDD1-206ENST00000554226 SBF1O95248 1867 aa19.27■□□□□ 0.68
NEDD1-206ENST00000554226 KCNA3P22001 575 aa19.27■□□□□ 0.68
NEDD1-206ENST00000554226 RPS6KA4O75676 772 aa19.26■□□□□ 0.67
NEDD1-206ENST00000554226 CAPN15O75808 1086 aa19.26■□□□□ 0.67
NEDD1-206ENST00000554226 TNS4Q8IZW8 715 aa19.26■□□□□ 0.67
NEDD1-206ENST00000554226 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
NEDD1-206ENST00000554226 PRELPP51888 382 aa19.25■□□□□ 0.67
NEDD1-206ENST00000554226 POLKQ9UBT6 870 aa19.25■□□□□ 0.67
NEDD1-206ENST00000554226 PCNTO95613 3336 aa19.25■□□□□ 0.67
NEDD1-206ENST00000554226 ADAMTS7Q9UKP4 1686 aa19.24■□□□□ 0.67
NEDD1-206ENST00000554226 PPM1GO15355 546 aaPredicted RBP19.24■□□□□ 0.67
NEDD1-206ENST00000554226 DCAF5Q96JK2 942 aa19.24■□□□□ 0.67
NEDD1-206ENST00000554226 PARP3Q9Y6F1 533 aa19.24■□□□□ 0.67
NEDD1-206ENST00000554226 HSP90AB1P08238 724 aaKnown RBP19.23■□□□□ 0.67
NEDD1-206ENST00000554226 RFC4P35249 363 aa19.23■□□□□ 0.67
NEDD1-206ENST00000554226 KDM6AO15550 1401 aaPredicted RBP19.23■□□□□ 0.67
NEDD1-206ENST00000554226 TJP1Q07157 1748 aa19.22■□□□□ 0.67
NEDD1-206ENST00000554226 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
NEDD1-206ENST00000554226 PIM2Q9P1W9 311 aa19.22■□□□□ 0.67
NEDD1-206ENST00000554226 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
NEDD1-206ENST00000554226 RNF181Q9P0P0 153 aa19.21■□□□□ 0.67
NEDD1-206ENST00000554226 ZC3H4Q9UPT8 1303 aaKnown RBP19.21■□□□□ 0.67
NEDD1-206ENST00000554226 SMC1BQ8NDV3 1235 aa19.2■□□□□ 0.66
NEDD1-206ENST00000554226 DALRD3Q5D0E6 543 aaKnown RBP19.19■□□□□ 0.66
NEDD1-206ENST00000554226 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
NEDD1-206ENST00000554226 USP42Q9H9J4 1324 aaKnown RBP19.19■□□□□ 0.66
NEDD1-206ENST00000554226 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
NEDD1-206ENST00000554226 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
NEDD1-206ENST00000554226 DDR1Q08345 913 aa19.17■□□□□ 0.66
NEDD1-206ENST00000554226 AMOTQ4VCS5 1084 aa19.17■□□□□ 0.66
NEDD1-206ENST00000554226 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
NEDD1-206ENST00000554226 HSPA1AP0DMV8 641 aaKnown RBP19.15■□□□□ 0.66
NEDD1-206ENST00000554226 HSPA1BP0DMV9 641 aaKnown RBP19.15■□□□□ 0.66
NEDD1-206ENST00000554226 CRKLP46109 303 aaKnown RBP19.15■□□□□ 0.66
NEDD1-206ENST00000554226 FKBP8Q14318 412 aa19.15■□□□□ 0.66
NEDD1-206ENST00000554226 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
NEDD1-206ENST00000554226 AFDNP55196 1824 aaKnown RBP19.14■□□□□ 0.65
NEDD1-206ENST00000554226 CABP4P57796 275 aa19.14■□□□□ 0.65
NEDD1-206ENST00000554226 POLRMTO00411 1230 aaKnown RBP19.13■□□□□ 0.65
NEDD1-206ENST00000554226 TM4SF1P30408 202 aa19.13■□□□□ 0.65
NEDD1-206ENST00000554226 CHRNA5P30532 468 aa19.13■□□□□ 0.65
NEDD1-206ENST00000554226 SRP68Q9UHB9 627 aaKnown RBP19.13■□□□□ 0.65
NEDD1-206ENST00000554226 ZNF530Q6P9A1 599 aaPredicted RBP19.12■□□□□ 0.65
NEDD1-206ENST00000554226 TIAM2Q8IVF5 1701 aa19.11■□□□□ 0.65
NEDD1-206ENST00000554226 PTCD1O75127 700 aaKnown RBP19.1■□□□□ 0.65
NEDD1-206ENST00000554226 MTHFSP49914 203 aa19.1■□□□□ 0.65
NEDD1-206ENST00000554226 RASSF7Q02833 373 aa19.1■□□□□ 0.65
NEDD1-206ENST00000554226 INTS5Q6P9B9 1019 aaKnown RBP19.1■□□□□ 0.65
NEDD1-206ENST00000554226 MRC1P22897 1456 aa19.09■□□□□ 0.65
NEDD1-206ENST00000554226 VEGFAP15692 232 aaPredicted RBP19.09■□□□□ 0.65
NEDD1-206ENST00000554226 NFATC2IPQ8NCF5 419 aa19.09■□□□□ 0.65
NEDD1-206ENST00000554226 CCDC88AQ3V6T2 1871 aa19.09■□□□□ 0.65
NEDD1-206ENST00000554226 GLTPD2A6NH11 291 aa19.08■□□□□ 0.64
NEDD1-206ENST00000554226 VIRMAQ69YN4 1812 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms