RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SIK1P57059 783 aa11.28□□□□□ -0.6
ACTN1-212ENST00000554158 ANKRD26Q9UPS8 1709 aa11.27□□□□□ -0.61
ACTN1-212ENST00000554158 PIGBQ92521 554 aa11.27□□□□□ -0.61
ACTN1-212ENST00000554158 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
ACTN1-212ENST00000554158 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
ACTN1-212ENST00000554158 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
ACTN1-212ENST00000554158 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
ACTN1-212ENST00000554158 RTCBQ9Y3I0 505 aaKnown RBP11.25□□□□□ -0.61
ACTN1-212ENST00000554158 ADCY9O60503 1353 aa11.25□□□□□ -0.61
ACTN1-212ENST00000554158 MMP10P09238 476 aa11.24□□□□□ -0.61
ACTN1-212ENST00000554158 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-212ENST00000554158 TRAPPC3LQ5T215 181 aa11.24□□□□□ -0.61
ACTN1-212ENST00000554158 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-212ENST00000554158 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
ACTN1-212ENST00000554158 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
ACTN1-212ENST00000554158 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
ACTN1-212ENST00000554158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.617e-7■■■□□ 15.2
ACTN1-212ENST00000554158 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
ACTN1-212ENST00000554158 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
ACTN1-212ENST00000554158 HSP90AB1P08238 724 aaKnown RBP11.23□□□□□ -0.61
ACTN1-212ENST00000554158 RFC4P35249 363 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 APLP1P51693 650 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 ASAP1Q9ULH1 1129 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-212ENST00000554158 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
ACTN1-212ENST00000554158 TGFB2P61812 414 aa11.22□□□□□ -0.61
ACTN1-212ENST00000554158 ZNF831Q5JPB2 1677 aa11.22□□□□□ -0.61
ACTN1-212ENST00000554158 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
ACTN1-212ENST00000554158 SMIM5Q71RC9 77 aa11.22□□□□□ -0.61
ACTN1-212ENST00000554158 EYA1Q99502 592 aa11.22□□□□□ -0.61
ACTN1-212ENST00000554158 BRCA1P38398 1863 aaKnown RBP11.21□□□□□ -0.61
ACTN1-212ENST00000554158 C4AP0C0L4 1744 aa11.21□□□□□ -0.61
ACTN1-212ENST00000554158 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-212ENST00000554158 FCHSD2O94868 740 aa11.21□□□□□ -0.61
ACTN1-212ENST00000554158 PHKG2P15735 406 aa11.21□□□□□ -0.61
ACTN1-212ENST00000554158 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-212ENST00000554158 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
ACTN1-212ENST00000554158 ITPK1Q13572 414 aa11.2□□□□□ -0.62
ACTN1-212ENST00000554158 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
ACTN1-212ENST00000554158 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
ACTN1-212ENST00000554158 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-212ENST00000554158 VIRMAQ69YN4 1812 aaKnown RBP11.2□□□□□ -0.62
ACTN1-212ENST00000554158 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 KIF3CO14782 793 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 TOMM70O94826 608 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 CABP4P57796 275 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-212ENST00000554158 CARD14Q9BXL6 1004 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
ACTN1-212ENST00000554158 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
ACTN1-212ENST00000554158 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
ACTN1-212ENST00000554158 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
ACTN1-212ENST00000554158 PLEKHG2Q9H7P9 1386 aa11.18□□□□□ -0.62
ACTN1-212ENST00000554158 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
ACTN1-212ENST00000554158 DCAF5Q96JK2 942 aa11.18□□□□□ -0.62
ACTN1-212ENST00000554158 CCDC88AQ3V6T2 1871 aa11.18□□□□□ -0.62
ACTN1-212ENST00000554158 SBF1O95248 1867 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 KDM2BQ8NHM5 1336 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-212ENST00000554158 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
ACTN1-212ENST00000554158 PIM2Q9P1W9 311 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 C10orf71Q711Q0 1435 aa11.17□□□□□ -0.62
ACTN1-212ENST00000554158 RPS6KA4O75676 772 aa11.16□□□□□ -0.62
ACTN1-212ENST00000554158 DPEP1P16444 411 aa11.16□□□□□ -0.62
ACTN1-212ENST00000554158 MTHFSP49914 203 aa11.16□□□□□ -0.62
ACTN1-212ENST00000554158 EIF4A2Q14240 407 aaKnown RBP11.16□□□□□ -0.62
ACTN1-212ENST00000554158 TNRC6CQ9HCJ0 1690 aaKnown RBP11.16□□□□□ -0.62
ACTN1-212ENST00000554158 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
ACTN1-212ENST00000554158 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
ACTN1-212ENST00000554158 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.62
ACTN1-212ENST00000554158 C9orf131Q5VYM1 1079 aa11.15□□□□□ -0.62
ACTN1-212ENST00000554158 KDRP35968 1356 aa11.15□□□□□ -0.63
ACTN1-212ENST00000554158 ZPR1O75312 459 aa11.14□□□□□ -0.63
ACTN1-212ENST00000554158 GYS1P13807 737 aa11.14□□□□□ -0.63
ACTN1-212ENST00000554158 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
ACTN1-212ENST00000554158 NMRK2Q9NPI5 230 aa11.14□□□□□ -0.63
ACTN1-212ENST00000554158 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
ACTN1-212ENST00000554158 AFDNP55196 1824 aaKnown RBP11.12□□□□□ -0.63
ACTN1-212ENST00000554158 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
ACTN1-212ENST00000554158 FSTL1Q12841 308 aa11.12□□□□□ -0.63
ACTN1-212ENST00000554158 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
ACTN1-212ENST00000554158 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
ACTN1-212ENST00000554158 TJP1Q07157 1748 aa11.12□□□□□ -0.63
ACTN1-212ENST00000554158 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
ACTN1-212ENST00000554158 USP42Q9H9J4 1324 aaKnown RBP11.1□□□□□ -0.63
ACTN1-212ENST00000554158 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
ACTN1-212ENST00000554158 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-212ENST00000554158 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
ACTN1-212ENST00000554158 SLC4A9Q96Q91 983 aa11.1□□□□□ -0.63
ACTN1-212ENST00000554158 SRP68Q9UHB9 627 aaKnown RBP11.1□□□□□ -0.63
ACTN1-212ENST00000554158 DLEC1Q9Y238 1755 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms