RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 FLT4P35916 1363 aa12.89□□□□□ -0.35
PRKCH-208ENST00000553846 MMP10P09238 476 aa12.88□□□□□ -0.35
PRKCH-208ENST00000553846 ADRA2BP18089 450 aa12.88□□□□□ -0.35
PRKCH-208ENST00000553846 HTRA3P83110 453 aa12.88□□□□□ -0.35
PRKCH-208ENST00000553846 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
PRKCH-208ENST00000553846 KCNA3P22001 575 aa12.87□□□□□ -0.35
PRKCH-208ENST00000553846 TGFB2P61812 414 aa12.87□□□□□ -0.35
PRKCH-208ENST00000553846 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
PRKCH-208ENST00000553846 SBF1O95248 1867 aa12.87□□□□□ -0.35
PRKCH-208ENST00000553846 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
PRKCH-208ENST00000553846 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
PRKCH-208ENST00000553846 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
PRKCH-208ENST00000553846 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
PRKCH-208ENST00000553846 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
PRKCH-208ENST00000553846 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
PRKCH-208ENST00000553846 GNPATO15228 680 aa12.85□□□□□ -0.35
PRKCH-208ENST00000553846 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
PRKCH-208ENST00000553846 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
PRKCH-208ENST00000553846 FSTL1Q12841 308 aa12.84□□□□□ -0.35
PRKCH-208ENST00000553846 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
PRKCH-208ENST00000553846 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-208ENST00000553846 DPEP1P16444 411 aa12.83□□□□□ -0.36
PRKCH-208ENST00000553846 PRELPP51888 382 aa12.83□□□□□ -0.36
PRKCH-208ENST00000553846 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
PRKCH-208ENST00000553846 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
PRKCH-208ENST00000553846 ST20-MTHFSA0A0A6YYL1 179 aa12.82□□□□□ -0.36
PRKCH-208ENST00000553846 GYS1P13807 737 aa12.82□□□□□ -0.36
PRKCH-208ENST00000553846 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
PRKCH-208ENST00000553846 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
PRKCH-208ENST00000553846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRKCH-208ENST00000553846 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
PRKCH-208ENST00000553846 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
PRKCH-208ENST00000553846 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
PRKCH-208ENST00000553846 TJP1Q07157 1748 aa12.8□□□□□ -0.36
PRKCH-208ENST00000553846 PHKG2P15735 406 aa12.8□□□□□ -0.36
PRKCH-208ENST00000553846 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
PRKCH-208ENST00000553846 TMF1P82094 1093 aa12.8□□□□□ -0.36
PRKCH-208ENST00000553846 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
PRKCH-208ENST00000553846 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
PRKCH-208ENST00000553846 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
PRKCH-208ENST00000553846 FCHSD2O94868 740 aa12.79□□□□□ -0.36
PRKCH-208ENST00000553846 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
PRKCH-208ENST00000553846 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
PRKCH-208ENST00000553846 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
PRKCH-208ENST00000553846 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
PRKCH-208ENST00000553846 EYA1Q99502 592 aa12.78□□□□□ -0.36
PRKCH-208ENST00000553846 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
PRKCH-208ENST00000553846 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
PRKCH-208ENST00000553846 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
PRKCH-208ENST00000553846 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
PRKCH-208ENST00000553846 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
PRKCH-208ENST00000553846 CAPN15O75808 1086 aa12.77□□□□□ -0.37
PRKCH-208ENST00000553846 DDR1Q08345 913 aa12.77□□□□□ -0.37
PRKCH-208ENST00000553846 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
PRKCH-208ENST00000553846 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
PRKCH-208ENST00000553846 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
PRKCH-208ENST00000553846 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
PRKCH-208ENST00000553846 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
PRKCH-208ENST00000553846 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
PRKCH-208ENST00000553846 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
PRKCH-208ENST00000553846 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
PRKCH-208ENST00000553846 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
PRKCH-208ENST00000553846 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
PRKCH-208ENST00000553846 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
PRKCH-208ENST00000553846 HSPA1AP0DMV8 641 aaKnown RBP12.74□□□□□ -0.37
PRKCH-208ENST00000553846 HSPA1BP0DMV9 641 aaKnown RBP12.74□□□□□ -0.37
PRKCH-208ENST00000553846 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
PRKCH-208ENST00000553846 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
PRKCH-208ENST00000553846 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
PRKCH-208ENST00000553846 FKBP8Q14318 412 aa12.73□□□□□ -0.37
PRKCH-208ENST00000553846 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
PRKCH-208ENST00000553846 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
PRKCH-208ENST00000553846 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
PRKCH-208ENST00000553846 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
PRKCH-208ENST00000553846 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
PRKCH-208ENST00000553846 CHRNA5P30532 468 aa12.72□□□□□ -0.37
PRKCH-208ENST00000553846 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
PRKCH-208ENST00000553846 POTECB2RU33 542 aa12.71□□□□□ -0.37
PRKCH-208ENST00000553846 TM4SF1P30408 202 aa12.71□□□□□ -0.37
PRKCH-208ENST00000553846 RFC4P35249 363 aa12.71□□□□□ -0.37
PRKCH-208ENST00000553846 RASSF7Q02833 373 aa12.71□□□□□ -0.37
PRKCH-208ENST00000553846 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
PRKCH-208ENST00000553846 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
PRKCH-208ENST00000553846 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
PRKCH-208ENST00000553846 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
PRKCH-208ENST00000553846 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
PRKCH-208ENST00000553846 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
PRKCH-208ENST00000553846 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
PRKCH-208ENST00000553846 MRC1P22897 1456 aa12.68□□□□□ -0.38
PRKCH-208ENST00000553846 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
PRKCH-208ENST00000553846 NFKBIEO00221 500 aa12.68□□□□□ -0.38
PRKCH-208ENST00000553846 SLC34A2O95436 690 aa12.68□□□□□ -0.38
PRKCH-208ENST00000553846 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
PRKCH-208ENST00000553846 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
PRKCH-208ENST00000553846 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
PRKCH-208ENST00000553846 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
PRKCH-208ENST00000553846 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
PRKCH-208ENST00000553846 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-208ENST00000553846 LMNB1P20700 586 aa12.66□□□□□ -0.38
PRKCH-208ENST00000553846 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms