RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 RAB15P59190 212 aa6.35□□□□□ -1.39
TDP1-207ENST00000553617 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
TDP1-207ENST00000553617 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
TDP1-207ENST00000553617 HELQQ8TDG4 1101 aa6.35□□□□□ -1.39
TDP1-207ENST00000553617 EMID1Q96A84 441 aaPredicted RBP6.35□□□□□ -1.39
TDP1-207ENST00000553617 DCTN4Q9UJW0 460 aa6.35□□□□□ -1.39
TDP1-207ENST00000553617 STAU1O95793 577 aaKnown RBP6.34□□□□□ -1.39
TDP1-207ENST00000553617 MAPK1P28482 360 aa6.34□□□□□ -1.39
TDP1-207ENST00000553617 GRM5P41594 1212 aa6.34□□□□□ -1.39
TDP1-207ENST00000553617 GDF10P55107 478 aa6.34□□□□□ -1.39
TDP1-207ENST00000553617 COL19A1Q14993 1142 aa6.34□□□□□ -1.39
TDP1-207ENST00000553617 MPNDQ8N594 471 aa6.34□□□□□ -1.39
TDP1-207ENST00000553617 INHAP05111 366 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 VAMP1P23763 118 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 RPIAP49247 311 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 RGL4Q8IZJ4 473 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 GAS2L2Q8NHY3 880 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 ETNK1Q9HBU6 452 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 TMPRSS4Q9NRS4 437 aa6.33□□□□□ -1.4
TDP1-207ENST00000553617 BACH1O14867 736 aa6.32□□□□□ -1.4
TDP1-207ENST00000553617 LILRA1O75019 489 aa6.32□□□□□ -1.4
TDP1-207ENST00000553617 FSHRP23945 695 aa6.32□□□□□ -1.4
TDP1-207ENST00000553617 FOXK2Q01167 660 aa6.32□□□□□ -1.4
TDP1-207ENST00000553617 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
TDP1-207ENST00000553617 TNS4Q8IZW8 715 aa6.32□□□□□ -1.4
TDP1-207ENST00000553617 SCG3Q8WXD2 468 aaKnown RBP6.32□□□□□ -1.4
TDP1-207ENST00000553617 TSPAN10Q9H1Z9 355 aaPredicted RBP6.32□□□□□ -1.4
TDP1-207ENST00000553617 ATAD2Q6PL18 1390 aa6.31□□□□□ -1.4
TDP1-207ENST00000553617 GGCXP38435 758 aa6.31□□□□□ -1.4
TDP1-207ENST00000553617 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
TDP1-207ENST00000553617 ZSCAN29Q8IWY8 852 aaPredicted RBP6.31□□□□□ -1.4
TDP1-207ENST00000553617 STAG2Q8N3U4 1231 aa6.31□□□□□ -1.4
TDP1-207ENST00000553617 ZNF784Q8NCA9 323 aaPredicted RBP6.31□□□□□ -1.4
TDP1-207ENST00000553617 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
TDP1-207ENST00000553617 CYLDQ9NQC7 956 aa6.31□□□□□ -1.4
TDP1-207ENST00000553617 SIAH2O43255 324 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 FAM13AO94988 1023 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 TAGLNQ01995 201 aaKnown RBP6.3□□□□□ -1.4
TDP1-207ENST00000553617 MTFR1Q15390 333 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 ZNF326Q5BKZ1 582 aaKnown RBP6.3□□□□□ -1.4
TDP1-207ENST00000553617 POTEAQ6S8J7 498 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 TRIM52Q96A61 297 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 PDZRN3Q9UPQ7 1066 aa6.3□□□□□ -1.4
TDP1-207ENST00000553617 LOC105371045A0A1W2PR82 267 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 A0A1W2PRU2 124 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 ADH1CP00326 375 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 GNRH1P01148 92 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 ARID5BQ14865 1188 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 RC3H1Q5TC82 1133 aaKnown RBP6.29□□□□□ -1.4
TDP1-207ENST00000553617 LIAT1Q6ZQX7 453 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 CYP2U1Q7Z449 544 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 SAP130Q9H0E3 1048 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 SCHIP1Q9P0W5 487 aaPredicted RBP6.29□□□□□ -1.4
TDP1-207ENST00000553617 SERTAD1Q9UHV2 236 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 TLL2Q9Y6L7 1015 aa6.29□□□□□ -1.4
TDP1-207ENST00000553617 RECKO95980 971 aa6.28□□□□□ -1.4
TDP1-207ENST00000553617 TCF3P15923 654 aa6.28□□□□□ -1.4
TDP1-207ENST00000553617 MPSTP25325 297 aa6.28□□□□□ -1.4
TDP1-207ENST00000553617 MYT1Q01538 1121 aa6.28□□□□□ -1.4
TDP1-207ENST00000553617 PPP1R26Q5T8A7 1209 aaPredicted RBP6.28□□□□□ -1.4
TDP1-207ENST00000553617 C16orf46Q6P387 395 aa6.28□□□□□ -1.4
TDP1-207ENST00000553617 CCDC116Q8IYX3 515 aa6.28□□□□□ -1.4
TDP1-207ENST00000553617 C2orf49Q9BVC5 232 aaPredicted RBP6.28□□□□□ -1.4
TDP1-207ENST00000553617 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
TDP1-207ENST00000553617 A6NJY4 79 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 TNFRSF10BO14763 440 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 IGHA2P01877 340 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 ADD1P35611 737 aaKnown RBP6.27□□□□□ -1.41
TDP1-207ENST00000553617 SMTNP53814 917 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 NR5A1Q13285 461 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 TMC7Q7Z402 723 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 SLC9A9Q8IVB4 645 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 IQSEC3Q9UPP2 1182 aaPredicted RBP6.27□□□□□ -1.41
TDP1-207ENST00000553617 HRH3Q9Y5N1 445 aa6.27□□□□□ -1.41
TDP1-207ENST00000553617 TREHO43280 583 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 PPP1R12BO60237 982 aaPredicted RBP6.26□□□□□ -1.41
TDP1-207ENST00000553617 CD2BP2O95400 341 aaKnown RBP6.26□□□□□ -1.41
TDP1-207ENST00000553617 IL2RAP01589 272 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 P4HBP07237 508 aaKnown RBP6.26□□□□□ -1.41
TDP1-207ENST00000553617 NR3C2P08235 984 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 FMR1Q06787 632 aaKnown RBP eCLIP6.26□□□□□ -1.41
TDP1-207ENST00000553617 EAPPQ56P03 285 aaPredicted RBP6.26□□□□□ -1.41
TDP1-207ENST00000553617 ESCO1Q5FWF5 840 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 COX20Q5RI15 118 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 XAGE2Q96GT9 111 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 MYO19Q96H55 970 aa6.26□□□□□ -1.41
TDP1-207ENST00000553617 QTRT2Q9H974 415 aaKnown RBP6.26□□□□□ -1.41
TDP1-207ENST00000553617 FZD6O60353 706 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 EIF1AXP47813 144 aaKnown RBP6.25□□□□□ -1.41
TDP1-207ENST00000553617 HIRAP54198 1017 aaPredicted RBP6.25□□□□□ -1.41
TDP1-207ENST00000553617 PSMA6P60900 246 aaKnown RBP6.25□□□□□ -1.41
TDP1-207ENST00000553617 DSC3Q14574 896 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 TBCELQ5QJ74 424 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 ZNF787Q6DD87 383 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 TRIM67Q6ZTA4 783 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 ZNF295-AS1Q8N0V1 137 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 CHMP7Q8WUX9 453 aaPredicted RBP6.25□□□□□ -1.41
TDP1-207ENST00000553617 VTI1AQ96AJ9 217 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms