RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
NEDD1-205ENST00000553609 GNPATO15228 680 aa19.75■□□□□ 0.75
NEDD1-205ENST00000553609 HSPA6P17066 643 aa19.75■□□□□ 0.75
NEDD1-205ENST00000553609 ATG3Q9NT62 314 aa19.75■□□□□ 0.75
NEDD1-205ENST00000553609 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
NEDD1-205ENST00000553609 PLEKHG2Q9H7P9 1386 aa19.74■□□□□ 0.75
NEDD1-205ENST00000553609 KIF13BQ9NQT8 1826 aa19.74■□□□□ 0.75
NEDD1-205ENST00000553609 KIF3CO14782 793 aa19.73■□□□□ 0.75
NEDD1-205ENST00000553609 IFNL2Q8IZJ0 200 aa19.73■□□□□ 0.75
NEDD1-205ENST00000553609 SLC4A9Q96Q91 983 aa19.73■□□□□ 0.75
NEDD1-205ENST00000553609 MMP10P09238 476 aa19.72■□□□□ 0.75
NEDD1-205ENST00000553609 ATP6V1AP38606 617 aa19.72■□□□□ 0.75
NEDD1-205ENST00000553609 ZNF831Q5JPB2 1677 aa19.71■□□□□ 0.75
NEDD1-205ENST00000553609 C10orf71Q711Q0 1435 aa19.71■□□□□ 0.75
NEDD1-205ENST00000553609 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
NEDD1-205ENST00000553609 COL5A3P25940 1745 aaPredicted RBP19.69■□□□□ 0.74
NEDD1-205ENST00000553609 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
NEDD1-205ENST00000553609 KDM6AO15550 1401 aaPredicted RBP19.67■□□□□ 0.74
NEDD1-205ENST00000553609 C4AP0C0L4 1744 aa19.65■□□□□ 0.74
NEDD1-205ENST00000553609 ERVV-2B6SEH9 535 aa19.65■□□□□ 0.74
NEDD1-205ENST00000553609 TGFB2P61812 414 aa19.65■□□□□ 0.74
NEDD1-205ENST00000553609 RC3H1Q5TC82 1133 aaKnown RBP19.65■□□□□ 0.74
NEDD1-205ENST00000553609 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
NEDD1-205ENST00000553609 CNTNAP4Q9C0A0 1308 aa19.65■□□□□ 0.74
NEDD1-205ENST00000553609 A0A0G2JLW4 131 aa19.64■□□□□ 0.73
NEDD1-205ENST00000553609 GYS1P13807 737 aa19.64■□□□□ 0.73
NEDD1-205ENST00000553609 TRAPPC3LQ5T215 181 aa19.64■□□□□ 0.73
NEDD1-205ENST00000553609 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.73
NEDD1-205ENST00000553609 ARHGEF1Q92888 912 aaKnown RBP19.64■□□□□ 0.73
NEDD1-205ENST00000553609 BRCA1P38398 1863 aaKnown RBP19.64■□□□□ 0.73
NEDD1-205ENST00000553609 MYH14Q7Z406 1995 aaKnown RBP19.63■□□□□ 0.73
NEDD1-205ENST00000553609 RPS6KA4O75676 772 aa19.62■□□□□ 0.73
NEDD1-205ENST00000553609 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
NEDD1-205ENST00000553609 DCAF5Q96JK2 942 aa19.62■□□□□ 0.73
NEDD1-205ENST00000553609 BCS1LQ9Y276 419 aa19.62■□□□□ 0.73
NEDD1-205ENST00000553609 DPEP1P16444 411 aa19.61■□□□□ 0.73
NEDD1-205ENST00000553609 KCNA3P22001 575 aa19.61■□□□□ 0.73
NEDD1-205ENST00000553609 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
NEDD1-205ENST00000553609 HSP90AB1P08238 724 aaKnown RBP19.59■□□□□ 0.73
NEDD1-205ENST00000553609 CCDC87Q9NVE4 849 aa19.59■□□□□ 0.73
NEDD1-205ENST00000553609 TOMM70O94826 608 aa19.58■□□□□ 0.72
NEDD1-205ENST00000553609 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
NEDD1-205ENST00000553609 NMRK2Q9NPI5 230 aa19.58■□□□□ 0.72
NEDD1-205ENST00000553609 TJP1Q07157 1748 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 ADAMTS7Q9UKP4 1686 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 RFC4P35249 363 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 PLEKHO1Q53GL0 409 aaPredicted RBP19.57■□□□□ 0.72
NEDD1-205ENST00000553609 ARHGAP27Q6ZUM4 889 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 DNAJC5GQ8N7S2 189 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
NEDD1-205ENST00000553609 APLP1P51693 650 aa19.56■□□□□ 0.72
NEDD1-205ENST00000553609 ARFGEF1Q9Y6D6 1849 aa19.55■□□□□ 0.72
NEDD1-205ENST00000553609 FCHSD2O94868 740 aa19.55■□□□□ 0.72
NEDD1-205ENST00000553609 CRKLP46109 303 aaKnown RBP19.55■□□□□ 0.72
NEDD1-205ENST00000553609 CABP4P57796 275 aa19.55■□□□□ 0.72
NEDD1-205ENST00000553609 DDR1Q08345 913 aa19.55■□□□□ 0.72
NEDD1-205ENST00000553609 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
NEDD1-205ENST00000553609 SRP68Q9UHB9 627 aaKnown RBP19.55■□□□□ 0.72
NEDD1-205ENST00000553609 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
NEDD1-205ENST00000553609 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
NEDD1-205ENST00000553609 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
NEDD1-205ENST00000553609 FKBP8Q14318 412 aa19.54■□□□□ 0.72
NEDD1-205ENST00000553609 POLR3GLQ9BT43 218 aa19.53■□□□□ 0.72
NEDD1-205ENST00000553609 MTHFSP49914 203 aa19.52■□□□□ 0.72
NEDD1-205ENST00000553609 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
NEDD1-205ENST00000553609 C9orf131Q5VYM1 1079 aa19.52■□□□□ 0.72
NEDD1-205ENST00000553609 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.72
NEDD1-205ENST00000553609 PANK3Q9H999 370 aa19.52■□□□□ 0.72
NEDD1-205ENST00000553609 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
NEDD1-205ENST00000553609 RBM46Q8TBY0 533 aaKnown RBP19.5■□□□□ 0.71
NEDD1-205ENST00000553609 PIM2Q9P1W9 311 aa19.5■□□□□ 0.71
NEDD1-205ENST00000553609 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
NEDD1-205ENST00000553609 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
NEDD1-205ENST00000553609 POLRMTO00411 1230 aaKnown RBP19.49■□□□□ 0.71
NEDD1-205ENST00000553609 C1orf141Q5JVX7 400 aa19.49■□□□□ 0.71
NEDD1-205ENST00000553609 KCPQ6ZWJ8 1503 aa19.49■□□□□ 0.71
NEDD1-205ENST00000553609 TM4SF1P30408 202 aa19.48■□□□□ 0.71
NEDD1-205ENST00000553609 CHRNA5P30532 468 aa19.48■□□□□ 0.71
NEDD1-205ENST00000553609 DALRD3Q5D0E6 543 aaKnown RBP19.48■□□□□ 0.71
NEDD1-205ENST00000553609 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
NEDD1-205ENST00000553609 MRC1P22897 1456 aa19.48■□□□□ 0.71
NEDD1-205ENST00000553609 HSPA5P11021 654 aaKnown RBP19.47■□□□□ 0.71
NEDD1-205ENST00000553609 IL13P35225 146 aa19.47■□□□□ 0.71
NEDD1-205ENST00000553609 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
NEDD1-205ENST00000553609 PCNTO95613 3336 aa19.46■□□□□ 0.71
NEDD1-205ENST00000553609 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
NEDD1-205ENST00000553609 HTRA3P83110 453 aa19.45■□□□□ 0.7
NEDD1-205ENST00000553609 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
NEDD1-205ENST00000553609 DNAJC10Q8IXB1 793 aa19.45■□□□□ 0.7
NEDD1-205ENST00000553609 RNF181Q9P0P0 153 aa19.45■□□□□ 0.7
NEDD1-205ENST00000553609 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
NEDD1-205ENST00000553609 SLC52A2Q9HAB3 445 aa19.44■□□□□ 0.7
NEDD1-205ENST00000553609 NRXN2Q9P2S2 1712 aa19.44■□□□□ 0.7
NEDD1-205ENST00000553609 SBF1O95248 1867 aa19.43■□□□□ 0.7
NEDD1-205ENST00000553609 FSTL1Q12841 308 aa19.43■□□□□ 0.7
NEDD1-205ENST00000553609 USPL1Q5W0Q7 1092 aa19.43■□□□□ 0.7
NEDD1-205ENST00000553609 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
NEDD1-205ENST00000553609 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
NEDD1-205ENST00000553609 CYP19A1P11511 503 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms