RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
IFT43-205ENST00000553438 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
IFT43-205ENST00000553438 TRAPPC3LQ5T215 181 aa14.15□□□□□ -0.14
IFT43-205ENST00000553438 RTCBQ9Y3I0 505 aaKnown RBP14.15□□□□□ -0.14
IFT43-205ENST00000553438 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
IFT43-205ENST00000553438 KDRP35968 1356 aa14.14□□□□□ -0.15
IFT43-205ENST00000553438 TGFB2P61812 414 aa14.14□□□□□ -0.15
IFT43-205ENST00000553438 NLGN1Q8N2Q7 840 aa14.14□□□□□ -0.15
IFT43-205ENST00000553438 POLKQ9UBT6 870 aa14.14□□□□□ -0.15
IFT43-205ENST00000553438 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
IFT43-205ENST00000553438 C10orf71Q711Q0 1435 aa14.14□□□□□ -0.15
IFT43-205ENST00000553438 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
IFT43-205ENST00000553438 APLP1P51693 650 aa14.13□□□□□ -0.15
IFT43-205ENST00000553438 SLC4A9Q96Q91 983 aa14.13□□□□□ -0.15
IFT43-205ENST00000553438 TOMM70O94826 608 aa14.12□□□□□ -0.15
IFT43-205ENST00000553438 ADRA2BP18089 450 aa14.12□□□□□ -0.15
IFT43-205ENST00000553438 EIF4A2Q14240 407 aaKnown RBP14.12□□□□□ -0.15
IFT43-205ENST00000553438 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
IFT43-205ENST00000553438 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
IFT43-205ENST00000553438 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
IFT43-205ENST00000553438 CCDC87Q9NVE4 849 aa14.12□□□□□ -0.15
IFT43-205ENST00000553438 KIF13BQ9NQT8 1826 aa14.12□□□□□ -0.15
IFT43-205ENST00000553438 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
IFT43-205ENST00000553438 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
IFT43-205ENST00000553438 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
IFT43-205ENST00000553438 FCHSD2O94868 740 aa14.11□□□□□ -0.15
IFT43-205ENST00000553438 DPEP1P16444 411 aa14.11□□□□□ -0.15
IFT43-205ENST00000553438 RC3H1Q5TC82 1133 aaKnown RBP14.11□□□□□ -0.15
IFT43-205ENST00000553438 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
IFT43-205ENST00000553438 CNTNAP4Q9C0A0 1308 aa14.11□□□□□ -0.15
IFT43-205ENST00000553438 RPS6KA4O75676 772 aa14.1□□□□□ -0.15
IFT43-205ENST00000553438 GYS1P13807 737 aa14.1□□□□□ -0.15
IFT43-205ENST00000553438 RFC4P35249 363 aa14.1□□□□□ -0.15
IFT43-205ENST00000553438 NMRK2Q9NPI5 230 aa14.1□□□□□ -0.15
IFT43-205ENST00000553438 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
IFT43-205ENST00000553438 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
IFT43-205ENST00000553438 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
IFT43-205ENST00000553438 PARP3Q9Y6F1 533 aa14.09□□□□□ -0.15
IFT43-205ENST00000553438 C4AP0C0L4 1744 aa14.08□□□□□ -0.16
IFT43-205ENST00000553438 DNAJC5GQ8N7S2 189 aa14.08□□□□□ -0.16
IFT43-205ENST00000553438 CABP4P57796 275 aa14.07□□□□□ -0.16
IFT43-205ENST00000553438 PLEKHO1Q53GL0 409 aaPredicted RBP14.07□□□□□ -0.16
IFT43-205ENST00000553438 C9orf131Q5VYM1 1079 aa14.07□□□□□ -0.16
IFT43-205ENST00000553438 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
IFT43-205ENST00000553438 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
IFT43-205ENST00000553438 KCNA3P22001 575 aa14.06□□□□□ -0.16
IFT43-205ENST00000553438 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
IFT43-205ENST00000553438 POLR3GLQ9BT43 218 aa14.06□□□□□ -0.16
IFT43-205ENST00000553438 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
IFT43-205ENST00000553438 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
IFT43-205ENST00000553438 PTCD1O75127 700 aaKnown RBP14.05□□□□□ -0.16
IFT43-205ENST00000553438 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
IFT43-205ENST00000553438 RBM46Q8TBY0 533 aaKnown RBP14.05□□□□□ -0.16
IFT43-205ENST00000553438 PIM2Q9P1W9 311 aa14.05□□□□□ -0.16
IFT43-205ENST00000553438 SRP68Q9UHB9 627 aaKnown RBP14.05□□□□□ -0.16
IFT43-205ENST00000553438 BRCA1P38398 1863 aaKnown RBP14.05□□□□□ -0.16
IFT43-205ENST00000553438 CRKLP46109 303 aaKnown RBP14.04□□□□□ -0.16
IFT43-205ENST00000553438 MTHFSP49914 203 aa14.04□□□□□ -0.16
IFT43-205ENST00000553438 DALRD3Q5D0E6 543 aaKnown RBP14.04□□□□□ -0.16
IFT43-205ENST00000553438 C16orf71Q8IYS4 520 aaPredicted RBP14.04□□□□□ -0.16
IFT43-205ENST00000553438 DDR1Q08345 913 aa14.03□□□□□ -0.16
IFT43-205ENST00000553438 FKBP8Q14318 412 aa14.03□□□□□ -0.16
IFT43-205ENST00000553438 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
IFT43-205ENST00000553438 ARFGEF1Q9Y6D6 1849 aa14.02□□□□□ -0.16
IFT43-205ENST00000553438 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
IFT43-205ENST00000553438 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.17
IFT43-205ENST00000553438 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.17
IFT43-205ENST00000553438 RNF181Q9P0P0 153 aa14.02□□□□□ -0.17
IFT43-205ENST00000553438 KCPQ6ZWJ8 1503 aa14.01□□□□□ -0.17
IFT43-205ENST00000553438 HTRA3P83110 453 aa14.01□□□□□ -0.17
IFT43-205ENST00000553438 FSTL1Q12841 308 aa14.01□□□□□ -0.17
IFT43-205ENST00000553438 NFATC2IPQ8NCF5 419 aa14.01□□□□□ -0.17
IFT43-205ENST00000553438 WDR90Q96KV7 1748 aa14.01□□□□□ -0.17
IFT43-205ENST00000553438 CHRNA5P30532 468 aa14□□□□□ -0.17
IFT43-205ENST00000553438 KLRG1Q96E93 195 aa14□□□□□ -0.17
IFT43-205ENST00000553438 POLRMTO00411 1230 aaKnown RBP13.99□□□□□ -0.17
IFT43-205ENST00000553438 INTS5Q6P9B9 1019 aaKnown RBP13.99□□□□□ -0.17
IFT43-205ENST00000553438 PANK3Q9H999 370 aa13.99□□□□□ -0.17
IFT43-205ENST00000553438 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
IFT43-205ENST00000553438 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
IFT43-205ENST00000553438 TM4SF1P30408 202 aa13.98□□□□□ -0.17
IFT43-205ENST00000553438 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
IFT43-205ENST00000553438 JMYQ8N9B5 988 aa13.98□□□□□ -0.17
IFT43-205ENST00000553438 ZPR1O75312 459 aa13.97□□□□□ -0.17
IFT43-205ENST00000553438 DNAJC10Q8IXB1 793 aa13.97□□□□□ -0.17
IFT43-205ENST00000553438 TJP1Q07157 1748 aa13.97□□□□□ -0.17
IFT43-205ENST00000553438 USPL1Q5W0Q7 1092 aa13.96□□□□□ -0.17
IFT43-205ENST00000553438 MORC1Q86VD1 984 aa13.96□□□□□ -0.17
IFT43-205ENST00000553438 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
IFT43-205ENST00000553438 RASSF7Q02833 373 aa13.95□□□□□ -0.18
IFT43-205ENST00000553438 COL13A1Q5TAT6 717 aaPredicted RBP13.95□□□□□ -0.18
IFT43-205ENST00000553438 SMC1BQ8NDV3 1235 aa13.95□□□□□ -0.18
IFT43-205ENST00000553438 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
IFT43-205ENST00000553438 ZC3H4Q9UPT8 1303 aaKnown RBP13.94□□□□□ -0.18
IFT43-205ENST00000553438 SBF1O95248 1867 aa13.94□□□□□ -0.18
IFT43-205ENST00000553438 IL13P35225 146 aa13.94□□□□□ -0.18
IFT43-205ENST00000553438 NFIXQ14938 502 aa13.94□□□□□ -0.18
IFT43-205ENST00000553438 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
IFT43-205ENST00000553438 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
IFT43-205ENST00000553438 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms