RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 ATP6V1AP38606 617 aa26.44■■□□□ 1.82
IFT43-204ENST00000553338 KDM6AO15550 1401 aaPredicted RBP26.44■■□□□ 1.82
IFT43-204ENST00000553338 PHF14O94880 888 aa26.43■■□□□ 1.82
IFT43-204ENST00000553338 LINC00116Q8NCU8 138 aa26.43■■□□□ 1.82
IFT43-204ENST00000553338 CABP4P57796 275 aa26.42■■□□□ 1.82
IFT43-204ENST00000553338 ITPK1Q13572 414 aa26.42■■□□□ 1.82
IFT43-204ENST00000553338 NPC1L1Q9UHC9 1359 aa26.41■■□□□ 1.82
IFT43-204ENST00000553338 UBR3Q6ZT12 1888 aa26.4■■□□□ 1.82
IFT43-204ENST00000553338 DIAPH1O60610 1272 aaKnown RBP26.39■■□□□ 1.82
IFT43-204ENST00000553338 HMOX1P09601 288 aa26.39■■□□□ 1.82
IFT43-204ENST00000553338 SMIM5Q71RC9 77 aa26.39■■□□□ 1.82
IFT43-204ENST00000553338 AMIGO3Q86WK7 504 aa26.39■■□□□ 1.82
IFT43-204ENST00000553338 RBM42Q9BTD8 480 aaKnown RBP26.39■■□□□ 1.82
IFT43-204ENST00000553338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.38■■□□□ 1.81
IFT43-204ENST00000553338 GNPATO15228 680 aa26.37■■□□□ 1.81
IFT43-204ENST00000553338 SSFA2P28290 1259 aa26.37■■□□□ 1.81
IFT43-204ENST00000553338 GPR162Q16538 588 aa26.34■■□□□ 1.81
IFT43-204ENST00000553338 AKAP4Q5JQC9 854 aa26.34■■□□□ 1.81
IFT43-204ENST00000553338 NFATC2IPQ8NCF5 419 aa26.34■■□□□ 1.81
IFT43-204ENST00000553338 NLGN2Q8NFZ4 835 aa26.34■■□□□ 1.81
IFT43-204ENST00000553338 PELP1Q8IZL8 1130 aaKnown RBP26.33■■□□□ 1.81
IFT43-204ENST00000553338 SLC4A9Q96Q91 983 aa26.33■■□□□ 1.81
IFT43-204ENST00000553338 ZNF831Q5JPB2 1677 aa26.33■■□□□ 1.81
IFT43-204ENST00000553338 SCN11AQ9UI33 1791 aa26.32■■□□□ 1.8
IFT43-204ENST00000553338 COL3A1P02461 1466 aaPredicted RBP26.31■■□□□ 1.8
IFT43-204ENST00000553338 U2SURPO15042 1029 aaKnown RBP26.3■■□□□ 1.8
IFT43-204ENST00000553338 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
IFT43-204ENST00000553338 RTCBQ9Y3I0 505 aaKnown RBP26.29■■□□□ 1.8
IFT43-204ENST00000553338 COL5A3P25940 1745 aaPredicted RBP26.28■■□□□ 1.8
IFT43-204ENST00000553338 MTHFSDQ2M296 383 aaKnown RBP26.27■■□□□ 1.8
IFT43-204ENST00000553338 LGR6Q9HBX8 967 aa26.27■■□□□ 1.8
IFT43-204ENST00000553338 CNTNAP4Q9C0A0 1308 aa26.26■■□□□ 1.79
IFT43-204ENST00000553338 RC3H1Q5TC82 1133 aaKnown RBP26.26■■□□□ 1.79
IFT43-204ENST00000553338 SLC52A2Q9HAB3 445 aa26.26■■□□□ 1.79
IFT43-204ENST00000553338 RNMTO43148 476 aaKnown RBP26.25■■□□□ 1.79
IFT43-204ENST00000553338 TRAPPC3LQ5T215 181 aa26.25■■□□□ 1.79
IFT43-204ENST00000553338 CD2APQ9Y5K6 639 aa26.25■■□□□ 1.79
IFT43-204ENST00000553338 CFAP53Q96M91 514 aa26.24■■□□□ 1.79
IFT43-204ENST00000553338 MRC1P22897 1456 aa26.23■■□□□ 1.79
IFT43-204ENST00000553338 VIRMAQ69YN4 1812 aaKnown RBP26.22■■□□□ 1.79
IFT43-204ENST00000553338 CHD4Q14839 1912 aa26.22■■□□□ 1.79
IFT43-204ENST00000553338 RPS6KA4O75676 772 aa26.21■■□□□ 1.79
IFT43-204ENST00000553338 ADRA2BP18089 450 aa26.21■■□□□ 1.79
IFT43-204ENST00000553338 ARHGEF1Q92888 912 aaKnown RBP26.21■■□□□ 1.79
IFT43-204ENST00000553338 TJP1Q07157 1748 aa26.21■■□□□ 1.79
IFT43-204ENST00000553338 CRKLP46109 303 aaKnown RBP26.2■■□□□ 1.78
IFT43-204ENST00000553338 ADAMTS7Q9UKP4 1686 aa26.19■■□□□ 1.78
IFT43-204ENST00000553338 RFC4P35249 363 aa26.19■■□□□ 1.78
IFT43-204ENST00000553338 CICQ96RK0 1608 aaPredicted RBP26.18■■□□□ 1.78
IFT43-204ENST00000553338 MMP10P09238 476 aa26.18■■□□□ 1.78
IFT43-204ENST00000553338 YBX3P16989 372 aaKnown RBP eCLIP26.18■■□□□ 1.78
IFT43-204ENST00000553338 PPP2R1AP30153 589 aa26.18■■□□□ 1.78
IFT43-204ENST00000553338 SLC39A6Q13433 755 aa26.18■■□□□ 1.78
IFT43-204ENST00000553338 MYH14Q7Z406 1995 aaKnown RBP26.17■■□□□ 1.78
IFT43-204ENST00000553338 GAS2L2Q8NHY3 880 aa26.17■■□□□ 1.78
IFT43-204ENST00000553338 UTRNP46939 3433 aa26.16■■□□□ 1.78
IFT43-204ENST00000553338 GRIN3BO60391 1043 aa26.16■■□□□ 1.78
IFT43-204ENST00000553338 NLGN1Q8N2Q7 840 aa26.16■■□□□ 1.78
IFT43-204ENST00000553338 NUDCQ9Y266 331 aa26.16■■□□□ 1.78
IFT43-204ENST00000553338 C4AP0C0L4 1744 aa26.16■■□□□ 1.78
IFT43-204ENST00000553338 DNAJC10Q8IXB1 793 aa26.15■■□□□ 1.78
IFT43-204ENST00000553338 ZNF784Q8NCA9 323 aaPredicted RBP26.15■■□□□ 1.78
IFT43-204ENST00000553338 GNAT3A8MTJ3 354 aa26.14■■□□□ 1.78
IFT43-204ENST00000553338 GYS1P13807 737 aa26.14■■□□□ 1.78
IFT43-204ENST00000553338 PRKAR2BP31323 418 aa26.14■■□□□ 1.78
IFT43-204ENST00000553338 KCPQ6ZWJ8 1503 aa26.14■■□□□ 1.77
IFT43-204ENST00000553338 TEFQ10587 303 aa26.12■■□□□ 1.77
IFT43-204ENST00000553338 INTS5Q6P9B9 1019 aaKnown RBP26.12■■□□□ 1.77
IFT43-204ENST00000553338 RSPH6AQ9H0K4 717 aa26.12■■□□□ 1.77
IFT43-204ENST00000553338 U2AF1L5P0DN76 240 aaPredicted RBP26.11■■□□□ 1.77
IFT43-204ENST00000553338 U2AF1Q01081 240 aaKnown RBP eCLIP26.11■■□□□ 1.77
IFT43-204ENST00000553338 CCDC87Q9NVE4 849 aa26.11■■□□□ 1.77
IFT43-204ENST00000553338 TTC5Q8N0Z6 440 aa26.1■■□□□ 1.77
IFT43-204ENST00000553338 IL17REQ8NFR9 667 aa26.1■■□□□ 1.77
IFT43-204ENST00000553338 PHACTR3Q96KR7 559 aa26.1■■□□□ 1.77
IFT43-204ENST00000553338 SRP68Q9UHB9 627 aaKnown RBP26.1■■□□□ 1.77
IFT43-204ENST00000553338 WWC3Q9ULE0 1092 aa26.1■■□□□ 1.77
IFT43-204ENST00000553338 PARP3Q9Y6F1 533 aa26.09■■□□□ 1.77
IFT43-204ENST00000553338 CYP19A1P11511 503 aaPredicted RBP26.08■■□□□ 1.77
IFT43-204ENST00000553338 USP42Q9H9J4 1324 aaKnown RBP26.08■■□□□ 1.77
IFT43-204ENST00000553338 UBR2Q8IWV8 1755 aa26.07■■□□□ 1.76
IFT43-204ENST00000553338 VSIG10Q8N0Z9 540 aa26.07■■□□□ 1.76
IFT43-204ENST00000553338 SOS1Q07889 1333 aaPredicted RBP26.06■■□□□ 1.76
IFT43-204ENST00000553338 KIF13BQ9NQT8 1826 aa26.05■■□□□ 1.76
IFT43-204ENST00000553338 C10orf71Q711Q0 1435 aa26.05■■□□□ 1.76
IFT43-204ENST00000553338 FKBP8Q14318 412 aa26.04■■□□□ 1.76
IFT43-204ENST00000553338 ZBTB1Q9Y2K1 713 aa26.04■■□□□ 1.76
IFT43-204ENST00000553338 SIPA1L3O60292 1781 aaPredicted RBP26.04■■□□□ 1.76
IFT43-204ENST00000553338 ZPR1O75312 459 aa26.03■■□□□ 1.76
IFT43-204ENST00000553338 FCHSD2O94868 740 aa26.03■■□□□ 1.76
IFT43-204ENST00000553338 ZNF790Q6PG37 636 aa26.03■■□□□ 1.76
IFT43-204ENST00000553338 GOLGB1Q14789 3259 aaKnown RBP26.03■■□□□ 1.76
IFT43-204ENST00000553338 PXDNLA1KZ92 1463 aa26.03■■□□□ 1.76
IFT43-204ENST00000553338 TGFB2P61812 414 aa26.02■■□□□ 1.76
IFT43-204ENST00000553338 ZNF496Q96IT1 587 aaPredicted RBP26.02■■□□□ 1.76
IFT43-204ENST00000553338 COL15A1P39059 1388 aa26.02■■□□□ 1.76
IFT43-204ENST00000553338 CEMIPQ8WUJ3 1361 aa26.02■■□□□ 1.76
IFT43-204ENST00000553338 STARD3NLO95772 234 aa26.01■■□□□ 1.75
IFT43-204ENST00000553338 USPL1Q5W0Q7 1092 aa26.01■■□□□ 1.75
IFT43-204ENST00000553338 RTF1Q92541 710 aaKnown RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms