RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
CHD8-203ENST00000553283 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
CHD8-203ENST00000553283 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
CHD8-203ENST00000553283 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
CHD8-203ENST00000553283 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
CHD8-203ENST00000553283 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
CHD8-203ENST00000553283 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
CHD8-203ENST00000553283 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
CHD8-203ENST00000553283 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
CHD8-203ENST00000553283 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
CHD8-203ENST00000553283 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
CHD8-203ENST00000553283 ZNF530Q6P9A1 599 aaPredicted RBP12.85□□□□□ -0.35
CHD8-203ENST00000553283 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
CHD8-203ENST00000553283 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
CHD8-203ENST00000553283 UBR3Q6ZT12 1888 aa12.85□□□□□ -0.35
CHD8-203ENST00000553283 MMP10P09238 476 aa12.84□□□□□ -0.35
CHD8-203ENST00000553283 CABP4P57796 275 aa12.84□□□□□ -0.35
CHD8-203ENST00000553283 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
CHD8-203ENST00000553283 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
CHD8-203ENST00000553283 KDRP35968 1356 aa12.83□□□□□ -0.36
CHD8-203ENST00000553283 ADRA2BP18089 450 aa12.83□□□□□ -0.36
CHD8-203ENST00000553283 MTHFSP49914 203 aa12.83□□□□□ -0.36
CHD8-203ENST00000553283 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
CHD8-203ENST00000553283 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
CHD8-203ENST00000553283 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
CHD8-203ENST00000553283 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
CHD8-203ENST00000553283 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
CHD8-203ENST00000553283 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
CHD8-203ENST00000553283 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
CHD8-203ENST00000553283 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
CHD8-203ENST00000553283 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
CHD8-203ENST00000553283 IL13P35225 146 aa12.81□□□□□ -0.36
CHD8-203ENST00000553283 TGFB2P61812 414 aa12.81□□□□□ -0.36
CHD8-203ENST00000553283 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
CHD8-203ENST00000553283 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
CHD8-203ENST00000553283 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
CHD8-203ENST00000553283 ADCY9O60503 1353 aa12.81□□□□□ -0.36
CHD8-203ENST00000553283 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
CHD8-203ENST00000553283 GYS1P13807 737 aa12.8□□□□□ -0.36
CHD8-203ENST00000553283 RFC4P35249 363 aa12.8□□□□□ -0.36
CHD8-203ENST00000553283 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
CHD8-203ENST00000553283 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
CHD8-203ENST00000553283 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
CHD8-203ENST00000553283 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
CHD8-203ENST00000553283 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
CHD8-203ENST00000553283 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
CHD8-203ENST00000553283 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CHD8-203ENST00000553283 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
CHD8-203ENST00000553283 PXDNLA1KZ92 1463 aa12.77□□□□□ -0.37
CHD8-203ENST00000553283 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.37
CHD8-203ENST00000553283 DPEP1P16444 411 aa12.76□□□□□ -0.37
CHD8-203ENST00000553283 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
CHD8-203ENST00000553283 INTS5Q6P9B9 1019 aaKnown RBP12.75□□□□□ -0.37
CHD8-203ENST00000553283 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
CHD8-203ENST00000553283 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
CHD8-203ENST00000553283 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
CHD8-203ENST00000553283 KIF7Q2M1P5 1343 aa12.74□□□□□ -0.37
CHD8-203ENST00000553283 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
CHD8-203ENST00000553283 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
CHD8-203ENST00000553283 KCNA3P22001 575 aa12.74□□□□□ -0.37
CHD8-203ENST00000553283 FKBP8Q14318 412 aa12.74□□□□□ -0.37
CHD8-203ENST00000553283 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
CHD8-203ENST00000553283 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
CHD8-203ENST00000553283 KIF3CO14782 793 aa12.73□□□□□ -0.37
CHD8-203ENST00000553283 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CHD8-203ENST00000553283 FCHSD2O94868 740 aa12.73□□□□□ -0.37
CHD8-203ENST00000553283 HMOX1P09601 288 aa12.73□□□□□ -0.37
CHD8-203ENST00000553283 HSPA6P17066 643 aa12.73□□□□□ -0.37
CHD8-203ENST00000553283 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
CHD8-203ENST00000553283 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
CHD8-203ENST00000553283 COL5A3P25940 1745 aaPredicted RBP12.72□□□□□ -0.37
CHD8-203ENST00000553283 TM4SF1P30408 202 aa12.72□□□□□ -0.37
CHD8-203ENST00000553283 DDR1Q08345 913 aa12.72□□□□□ -0.37
CHD8-203ENST00000553283 PIM2Q9P1W9 311 aa12.72□□□□□ -0.37
CHD8-203ENST00000553283 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
CHD8-203ENST00000553283 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.37
CHD8-203ENST00000553283 ZPR1O75312 459 aa12.71□□□□□ -0.37
CHD8-203ENST00000553283 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.37
CHD8-203ENST00000553283 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
CHD8-203ENST00000553283 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
CHD8-203ENST00000553283 KIF13BQ9NQT8 1826 aa12.71□□□□□ -0.38
CHD8-203ENST00000553283 C4AP0C0L4 1744 aa12.71□□□□□ -0.38
CHD8-203ENST00000553283 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
CHD8-203ENST00000553283 DALRD3Q5D0E6 543 aaKnown RBP12.7□□□□□ -0.38
CHD8-203ENST00000553283 CC2D1BQ5T0F9 858 aaKnown RBP12.7□□□□□ -0.38
CHD8-203ENST00000553283 USPL1Q5W0Q7 1092 aa12.7□□□□□ -0.38
CHD8-203ENST00000553283 SOS1Q07889 1333 aaPredicted RBP12.69□□□□□ -0.38
CHD8-203ENST00000553283 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
CHD8-203ENST00000553283 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
CHD8-203ENST00000553283 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
CHD8-203ENST00000553283 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
CHD8-203ENST00000553283 TOMM70O94826 608 aa12.68□□□□□ -0.38
CHD8-203ENST00000553283 CHRNA5P30532 468 aa12.68□□□□□ -0.38
CHD8-203ENST00000553283 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
CHD8-203ENST00000553283 NFIXQ14938 502 aa12.67□□□□□ -0.38
CHD8-203ENST00000553283 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
CHD8-203ENST00000553283 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
CHD8-203ENST00000553283 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
CHD8-203ENST00000553283 MRC1P22897 1456 aa12.66□□□□□ -0.38
CHD8-203ENST00000553283 TJP1Q07157 1748 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms