RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
SUPT16H-202ENST00000552829 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
SUPT16H-202ENST00000552829 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
SUPT16H-202ENST00000552829 INSRP06213 1382 aa16.1■□□□□ 0.17
SUPT16H-202ENST00000552829 C10orf71Q711Q0 1435 aa16.1■□□□□ 0.17
SUPT16H-202ENST00000552829 ITPK1Q13572 414 aa16.09■□□□□ 0.17
SUPT16H-202ENST00000552829 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
SUPT16H-202ENST00000552829 CAPN15O75808 1086 aa16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 SMG6Q86US8 1419 aaKnown RBP16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 SBF1O95248 1867 aa16.08■□□□□ 0.16
SUPT16H-202ENST00000552829 FYB1O15117 783 aa16.07■□□□□ 0.16
SUPT16H-202ENST00000552829 GNPATO15228 680 aa16.07■□□□□ 0.16
SUPT16H-202ENST00000552829 DPEP1P16444 411 aa16.07■□□□□ 0.16
SUPT16H-202ENST00000552829 KCNA3P22001 575 aa16.07■□□□□ 0.16
SUPT16H-202ENST00000552829 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
SUPT16H-202ENST00000552829 C9orf131Q5VYM1 1079 aa16.06■□□□□ 0.16
SUPT16H-202ENST00000552829 TESK2Q96S53 571 aa16.06■□□□□ 0.16
SUPT16H-202ENST00000552829 ASAP1Q9ULH1 1129 aa16.06■□□□□ 0.16
SUPT16H-202ENST00000552829 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
SUPT16H-202ENST00000552829 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
SUPT16H-202ENST00000552829 NLGN1Q8N2Q7 840 aa16.05■□□□□ 0.16
SUPT16H-202ENST00000552829 FCHSD2O94868 740 aa16.04■□□□□ 0.16
SUPT16H-202ENST00000552829 TMF1P82094 1093 aa16.04■□□□□ 0.16
SUPT16H-202ENST00000552829 NEUROD1Q13562 356 aa16.04■□□□□ 0.16
SUPT16H-202ENST00000552829 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
SUPT16H-202ENST00000552829 FLT4P35916 1363 aa16.03■□□□□ 0.16
SUPT16H-202ENST00000552829 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
SUPT16H-202ENST00000552829 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
SUPT16H-202ENST00000552829 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
SUPT16H-202ENST00000552829 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
SUPT16H-202ENST00000552829 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.16
SUPT16H-202ENST00000552829 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
SUPT16H-202ENST00000552829 DCAF5Q96JK2 942 aa16.02■□□□□ 0.16
SUPT16H-202ENST00000552829 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
SUPT16H-202ENST00000552829 CCDC87Q9NVE4 849 aa16.02■□□□□ 0.16
SUPT16H-202ENST00000552829 KDRP35968 1356 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 GYS1P13807 737 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 RRAGCQ9HB90 399 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.157e-11■■□□□ 13
SUPT16H-202ENST00000552829 TMOD3Q9NYL9 352 aa16.01■□□□□ 0.15
SUPT16H-202ENST00000552829 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
SUPT16H-202ENST00000552829 SPG7Q9UQ90 795 aa16■□□□□ 0.15
SUPT16H-202ENST00000552829 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
SUPT16H-202ENST00000552829 TONSLQ96HA7 1378 aa16■□□□□ 0.15
SUPT16H-202ENST00000552829 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
SUPT16H-202ENST00000552829 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
SUPT16H-202ENST00000552829 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
SUPT16H-202ENST00000552829 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
SUPT16H-202ENST00000552829 ST20-MTHFSA0A0A6YYL1 179 aa15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 HSPA1AP0DMV8 641 aaKnown RBP15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 HSPA1BP0DMV9 641 aaKnown RBP15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 PHKG2P15735 406 aa15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 RNF181Q9P0P0 153 aa15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
SUPT16H-202ENST00000552829 CNTNAP4Q9C0A0 1308 aa15.96■□□□□ 0.15
SUPT16H-202ENST00000552829 SLC24A1O60721 1099 aa15.96■□□□□ 0.15
SUPT16H-202ENST00000552829 DALRD3Q5D0E6 543 aaKnown RBP15.96■□□□□ 0.15
SUPT16H-202ENST00000552829 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
SUPT16H-202ENST00000552829 ANKRD26Q9UPS8 1709 aa15.96■□□□□ 0.15
SUPT16H-202ENST00000552829 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
SUPT16H-202ENST00000552829 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
SUPT16H-202ENST00000552829 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
SUPT16H-202ENST00000552829 RFC4P35249 363 aa15.94■□□□□ 0.14
SUPT16H-202ENST00000552829 EYA1Q99502 592 aa15.94■□□□□ 0.14
SUPT16H-202ENST00000552829 ZC3H4Q9UPT8 1303 aaKnown RBP15.94■□□□□ 0.14
SUPT16H-202ENST00000552829 DDR1Q08345 913 aa15.93■□□□□ 0.14
SUPT16H-202ENST00000552829 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
SUPT16H-202ENST00000552829 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
SUPT16H-202ENST00000552829 CCDC88AQ3V6T2 1871 aa15.92■□□□□ 0.14
SUPT16H-202ENST00000552829 ERVV-2B6SEH9 535 aa15.91■□□□□ 0.14
SUPT16H-202ENST00000552829 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
SUPT16H-202ENST00000552829 ADAMTS7Q9UKP4 1686 aa15.9■□□□□ 0.14
SUPT16H-202ENST00000552829 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
SUPT16H-202ENST00000552829 SLC34A2O95436 690 aa15.9■□□□□ 0.14
SUPT16H-202ENST00000552829 CHRNA5P30532 468 aa15.9■□□□□ 0.14
SUPT16H-202ENST00000552829 FKBP8Q14318 412 aa15.9■□□□□ 0.14
SUPT16H-202ENST00000552829 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
SUPT16H-202ENST00000552829 TM4SF1P30408 202 aa15.89■□□□□ 0.13
SUPT16H-202ENST00000552829 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
SUPT16H-202ENST00000552829 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
SUPT16H-202ENST00000552829 USP42Q9H9J4 1324 aaKnown RBP15.89■□□□□ 0.13
SUPT16H-202ENST00000552829 POTECB2RU33 542 aa15.88■□□□□ 0.13
SUPT16H-202ENST00000552829 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
SUPT16H-202ENST00000552829 POLRMTO00411 1230 aaKnown RBP15.87■□□□□ 0.13
SUPT16H-202ENST00000552829 RASSF7Q02833 373 aa15.87■□□□□ 0.13
SUPT16H-202ENST00000552829 DLEC1Q9Y238 1755 aa15.86■□□□□ 0.13
SUPT16H-202ENST00000552829 LMNB1P20700 586 aa15.86■□□□□ 0.13
SUPT16H-202ENST00000552829 CRKLP46109 303 aaKnown RBP15.85■□□□□ 0.13
SUPT16H-202ENST00000552829 TJP1Q07157 1748 aa15.85■□□□□ 0.13
SUPT16H-202ENST00000552829 NRXN2Q9P2S2 1712 aa15.85■□□□□ 0.13
SUPT16H-202ENST00000552829 PPM1GO15355 546 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms