RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-229ENST00000552818 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
PFKM-229ENST00000552818 RARSP54136 660 aaKnown RBP12.44□□□□□ -0.42
PFKM-229ENST00000552818 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
PFKM-229ENST00000552818 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
PFKM-229ENST00000552818 KDM6AO15550 1401 aaPredicted RBP12.44□□□□□ -0.42
PFKM-229ENST00000552818 ITGB4P16144 1822 aa12.44□□□□□ -0.42
PFKM-229ENST00000552818 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.43□□□□□ -0.42
PFKM-229ENST00000552818 CHL1O00533 1208 aa12.43□□□□□ -0.42
PFKM-229ENST00000552818 TOM1O60784 492 aa12.43□□□□□ -0.42
PFKM-229ENST00000552818 NEFLP07196 543 aa12.43□□□□□ -0.42
PFKM-229ENST00000552818 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
PFKM-229ENST00000552818 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
PFKM-229ENST00000552818 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
PFKM-229ENST00000552818 LRP6O75581 1613 aa12.42□□□□□ -0.42
PFKM-229ENST00000552818 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
PFKM-229ENST00000552818 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
PFKM-229ENST00000552818 GNAI1P63096 354 aa12.42□□□□□ -0.42
PFKM-229ENST00000552818 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
PFKM-229ENST00000552818 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
PFKM-229ENST00000552818 GNAT3A8MTJ3 354 aa12.41□□□□□ -0.42
PFKM-229ENST00000552818 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
PFKM-229ENST00000552818 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
PFKM-229ENST00000552818 NLRP2Q9NX02 1062 aa12.41□□□□□ -0.42
PFKM-229ENST00000552818 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
PFKM-229ENST00000552818 SLIT2O94813 1529 aa12.41□□□□□ -0.42
PFKM-229ENST00000552818 CT47B1P0C2W7 299 aaPredicted RBP12.4□□□□□ -0.42
PFKM-229ENST00000552818 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
PFKM-229ENST00000552818 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
PFKM-229ENST00000552818 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
PFKM-229ENST00000552818 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
PFKM-229ENST00000552818 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
PFKM-229ENST00000552818 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
PFKM-229ENST00000552818 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
PFKM-229ENST00000552818 LGR6Q9HBX8 967 aa12.4□□□□□ -0.42
PFKM-229ENST00000552818 VAMP4O75379 141 aa12.39□□□□□ -0.43
PFKM-229ENST00000552818 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
PFKM-229ENST00000552818 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
PFKM-229ENST00000552818 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
PFKM-229ENST00000552818 LAS1LQ9Y4W2 734 aaKnown RBP12.39□□□□□ -0.43
PFKM-229ENST00000552818 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 CYP27B1O15528 508 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 AMOTQ4VCS5 1084 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 PLEKHO1Q53GL0 409 aaPredicted RBP12.38□□□□□ -0.43
PFKM-229ENST00000552818 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
PFKM-229ENST00000552818 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 CARD10Q9BWT7 1032 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
PFKM-229ENST00000552818 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
PFKM-229ENST00000552818 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
PFKM-229ENST00000552818 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
PFKM-229ENST00000552818 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
PFKM-229ENST00000552818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
PFKM-229ENST00000552818 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
PFKM-229ENST00000552818 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
PFKM-229ENST00000552818 RGS12O14924 1447 aa12.37□□□□□ -0.43
PFKM-229ENST00000552818 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
PFKM-229ENST00000552818 RLBP1P12271 317 aa12.36□□□□□ -0.43
PFKM-229ENST00000552818 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
PFKM-229ENST00000552818 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
PFKM-229ENST00000552818 JCADQ9P266 1359 aa12.35□□□□□ -0.43
PFKM-229ENST00000552818 PHKG2P15735 406 aa12.35□□□□□ -0.43
PFKM-229ENST00000552818 TATP17735 454 aaPredicted RBP12.35□□□□□ -0.43
PFKM-229ENST00000552818 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
PFKM-229ENST00000552818 MPRIPQ6WCQ1 1025 aa12.35□□□□□ -0.43
PFKM-229ENST00000552818 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
PFKM-229ENST00000552818 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
PFKM-229ENST00000552818 HEG1Q9ULI3 1381 aa12.34□□□□□ -0.43
PFKM-229ENST00000552818 PYGBP11216 843 aa12.34□□□□□ -0.43
PFKM-229ENST00000552818 TWISTNBQ3B726 338 aaPredicted RBP12.34□□□□□ -0.43
PFKM-229ENST00000552818 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
PFKM-229ENST00000552818 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
PFKM-229ENST00000552818 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
PFKM-229ENST00000552818 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
PFKM-229ENST00000552818 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
PFKM-229ENST00000552818 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
PFKM-229ENST00000552818 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
PFKM-229ENST00000552818 KCNQ3O43525 872 aa12.33□□□□□ -0.44
PFKM-229ENST00000552818 TAF7Q15545 349 aaPredicted RBP12.33□□□□□ -0.44
PFKM-229ENST00000552818 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
PFKM-229ENST00000552818 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
PFKM-229ENST00000552818 TSPYL4Q9UJ04 414 aa12.33□□□□□ -0.44
PFKM-229ENST00000552818 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
PFKM-229ENST00000552818 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
PFKM-229ENST00000552818 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
PFKM-229ENST00000552818 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
PFKM-229ENST00000552818 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
PFKM-229ENST00000552818 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
PFKM-229ENST00000552818 TRIM27P14373 513 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 IL2RBP14784 551 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
PFKM-229ENST00000552818 NUTM2BA6NNL0 878 aaPredicted RBP12.3□□□□□ -0.44
PFKM-229ENST00000552818 NUTM2EB1AL46 878 aaPredicted RBP12.3□□□□□ -0.44
PFKM-229ENST00000552818 TCERG1O14776 1098 aaKnown RBP12.3□□□□□ -0.44
PFKM-229ENST00000552818 HSPA1LP34931 641 aa12.3□□□□□ -0.44
PFKM-229ENST00000552818 EIF4A1P60842 406 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms