RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 HOXB7P09629 217 aa29.33■■■□□ 2.29
RITA1-203ENST00000552495 CCT4P50991 539 aaKnown RBP29.33■■■□□ 2.29
RITA1-203ENST00000552495 PLEKHG2Q9H7P9 1386 aa29.33■■■□□ 2.29
RITA1-203ENST00000552495 BTBD11A6QL63 1104 aa29.32■■■□□ 2.28
RITA1-203ENST00000552495 CSB-PGBD3P0DP91 1061 aa29.32■■■□□ 2.28
RITA1-203ENST00000552495 EIF4A1P60842 406 aaKnown RBP29.31■■■□□ 2.28
RITA1-203ENST00000552495 FLIIQ13045 1269 aa29.31■■■□□ 2.28
RITA1-203ENST00000552495 TATP17735 454 aaPredicted RBP29.3■■■□□ 2.28
RITA1-203ENST00000552495 HDGFL1Q5TGJ6 251 aa29.3■■■□□ 2.28
RITA1-203ENST00000552495 NOP58Q9Y2X3 529 aaKnown RBP29.3■■■□□ 2.28
RITA1-203ENST00000552495 SIRT2Q8IXJ6 389 aa29.29■■■□□ 2.28
RITA1-203ENST00000552495 CHRNA2Q15822 529 aa29.29■■■□□ 2.28
RITA1-203ENST00000552495 CHD1LQ86WJ1 897 aa29.29■■■□□ 2.28
RITA1-203ENST00000552495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.29■■■□□ 2.28
RITA1-203ENST00000552495 RPAP2Q8IXW5 612 aaPredicted RBP29.28■■■□□ 2.28
RITA1-203ENST00000552495 ZBTB47Q9UFB7 747 aaPredicted RBP29.28■■■□□ 2.28
RITA1-203ENST00000552495 FKBP5Q13451 457 aaPredicted RBP29.27■■■□□ 2.28
RITA1-203ENST00000552495 NECTIN2Q92692 538 aa29.27■■■□□ 2.28
RITA1-203ENST00000552495 SPG7Q9UQ90 795 aa29.27■■■□□ 2.28
RITA1-203ENST00000552495 SLC4A10Q6U841 1118 aa29.27■■■□□ 2.28
RITA1-203ENST00000552495 DDRGK1Q96HY6 314 aa29.27■■■□□ 2.28
RITA1-203ENST00000552495 F6X3S4 739 aa29.25■■■□□ 2.27
RITA1-203ENST00000552495 ADAMTS7Q9UKP4 1686 aa29.25■■■□□ 2.27
RITA1-203ENST00000552495 ANKRD44Q8N8A2 993 aa29.25■■■□□ 2.27
RITA1-203ENST00000552495 ANKRD45Q5TZF3 282 aa29.23■■■□□ 2.27
RITA1-203ENST00000552495 MEIS3Q99687 375 aa29.23■■■□□ 2.27
RITA1-203ENST00000552495 LNPKQ9C0E8 428 aa29.23■■■□□ 2.27
RITA1-203ENST00000552495 ATP10DQ9P241 1426 aa29.22■■■□□ 2.27
RITA1-203ENST00000552495 ANP32EQ9BTT0 268 aa29.22■■■□□ 2.27
RITA1-203ENST00000552495 KCNQ3O43525 872 aa29.21■■■□□ 2.27
RITA1-203ENST00000552495 MEGF6O75095 1541 aa29.21■■■□□ 2.27
RITA1-203ENST00000552495 PXDNLA1KZ92 1463 aa29.21■■■□□ 2.27
RITA1-203ENST00000552495 CEP85Q6P2H3 762 aa29.21■■■□□ 2.27
RITA1-203ENST00000552495 DCTPP1Q9H773 170 aa29.21■■■□□ 2.27
RITA1-203ENST00000552495 PRDM11Q9NQV5 511 aa29.21■■■□□ 2.27
RITA1-203ENST00000552495 EIF2S2P20042 333 aaKnown RBP29.2■■■□□ 2.26
RITA1-203ENST00000552495 SIPA1L3O60292 1781 aaPredicted RBP29.19■■■□□ 2.26
RITA1-203ENST00000552495 PHKG2P15735 406 aa29.19■■■□□ 2.26
RITA1-203ENST00000552495 IFNL2Q8IZJ0 200 aa29.19■■■□□ 2.26
RITA1-203ENST00000552495 GNAI3P08754 354 aa29.17■■■□□ 2.26
RITA1-203ENST00000552495 NHSL1Q5SYE7 1610 aa29.16■■■□□ 2.26
RITA1-203ENST00000552495 HEG1Q9ULI3 1381 aa29.16■■■□□ 2.26
RITA1-203ENST00000552495 HMMRO75330 724 aa29.16■■■□□ 2.26
RITA1-203ENST00000552495 UPF2Q9HAU5 1272 aaKnown RBP29.16■■■□□ 2.26
RITA1-203ENST00000552495 GNAI2P04899 355 aa29.15■■■□□ 2.26
RITA1-203ENST00000552495 WDR17Q8IZU2 1322 aa29.15■■■□□ 2.26
RITA1-203ENST00000552495 N4BP2Q86UW6 1770 aaPredicted RBP29.15■■■□□ 2.26
RITA1-203ENST00000552495 SCN11AQ9UI33 1791 aa29.15■■■□□ 2.26
RITA1-203ENST00000552495 GIGYF1O75420 1035 aaPredicted RBP29.14■■■□□ 2.26
RITA1-203ENST00000552495 PHAXQ9H814 394 aaKnown RBP29.14■■■□□ 2.26
RITA1-203ENST00000552495 SLC52A2Q9HAB3 445 aa29.14■■■□□ 2.26
RITA1-203ENST00000552495 CHPF2Q9P2E5 772 aa29.14■■■□□ 2.26
RITA1-203ENST00000552495 HSP90AB1P08238 724 aaKnown RBP29.14■■■□□ 2.26
RITA1-203ENST00000552495 DBF4Q9UBU7 674 aaPredicted RBP29.14■■■□□ 2.26
RITA1-203ENST00000552495 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.25
RITA1-203ENST00000552495 KDM6AO15550 1401 aaPredicted RBP29.13■■■□□ 2.25
RITA1-203ENST00000552495 SEC24BO95487 1268 aa29.13■■■□□ 2.25
RITA1-203ENST00000552495 DCAF5Q96JK2 942 aa29.12■■■□□ 2.25
RITA1-203ENST00000552495 ABCA3Q99758 1704 aa29.12■■■□□ 2.25
RITA1-203ENST00000552495 BMP2KLQ5H9B9 411 aa29.1■■■□□ 2.25
RITA1-203ENST00000552495 TOM1L2Q6ZVM7 507 aa29.1■■■□□ 2.25
RITA1-203ENST00000552495 ZNF790Q6PG37 636 aa29.09■■■□□ 2.25
RITA1-203ENST00000552495 COL5A2P05997 1499 aaPredicted RBP29.09■■■□□ 2.25
RITA1-203ENST00000552495 CYP27B1O15528 508 aa29.08■■■□□ 2.25
RITA1-203ENST00000552495 NFATC2IPQ8NCF5 419 aa29.07■■■□□ 2.24
RITA1-203ENST00000552495 SRCIN1Q9C0H9 1055 aa29.07■■■□□ 2.24
RITA1-203ENST00000552495 MRC1P22897 1456 aa29.07■■■□□ 2.24
RITA1-203ENST00000552495 PARP4Q9UKK3 1724 aaKnown RBP29.07■■■□□ 2.24
RITA1-203ENST00000552495 DNAAF4Q8WXU2 420 aa29.06■■■□□ 2.24
RITA1-203ENST00000552495 CARD10Q9BWT7 1032 aa29.04■■■□□ 2.24
RITA1-203ENST00000552495 DAXXQ9UER7 740 aaPredicted RBP29.04■■■□□ 2.24
RITA1-203ENST00000552495 USP44Q9H0E7 712 aa29.04■■■□□ 2.24
RITA1-203ENST00000552495 HYPKQ9NX55 129 aa29.04■■■□□ 2.24
RITA1-203ENST00000552495 PI4KAP2A4QPH2 592 aa29.03■■■□□ 2.24
RITA1-203ENST00000552495 UBTFL1P0CB47 393 aaPredicted RBP29.03■■■□□ 2.24
RITA1-203ENST00000552495 PI4KAP1Q8N8J0 262 aa29.03■■■□□ 2.24
RITA1-203ENST00000552495 PCDH11XQ9BZA7 1347 aa29.03■■■□□ 2.24
RITA1-203ENST00000552495 PCDH11YQ9BZA8 1340 aa29.03■■■□□ 2.24
RITA1-203ENST00000552495 ZCRB1Q8TBF4 217 aaKnown RBP29.02■■■□□ 2.24
RITA1-203ENST00000552495 ATP8B2P98198 1209 aa29.02■■■□□ 2.24
RITA1-203ENST00000552495 EVA1CP58658 441 aa29.01■■■□□ 2.23
RITA1-203ENST00000552495 SLC39A6Q13433 755 aa29.01■■■□□ 2.23
RITA1-203ENST00000552495 TTC5Q8N0Z6 440 aa29.01■■■□□ 2.23
RITA1-203ENST00000552495 TBC1D32Q96NH3 1257 aa29.01■■■□□ 2.23
RITA1-203ENST00000552495 ANXA1P04083 346 aa29■■■□□ 2.23
RITA1-203ENST00000552495 BEND3Q5T5X7 828 aa29■■■□□ 2.23
RITA1-203ENST00000552495 DDX21Q9NR30 783 aaKnown RBP eCLIP29■■■□□ 2.23
RITA1-203ENST00000552495 CABP4P57796 275 aa29■■■□□ 2.23
RITA1-203ENST00000552495 PRAMEF22A3QJZ6 481 aa28.99■■■□□ 2.23
RITA1-203ENST00000552495 IL2RBP14784 551 aa28.99■■■□□ 2.23
RITA1-203ENST00000552495 PLEKHM2Q8IWE5 1019 aa28.99■■■□□ 2.23
RITA1-203ENST00000552495 LRRFIP2Q9Y608 721 aaKnown RBP28.99■■■□□ 2.23
RITA1-203ENST00000552495 ADCY9O60503 1353 aa28.99■■■□□ 2.23
RITA1-203ENST00000552495 KSR2Q6VAB6 950 aa28.97■■■□□ 2.23
RITA1-203ENST00000552495 DDX58O95786 925 aaKnown RBP28.97■■■□□ 2.23
RITA1-203ENST00000552495 STRN4Q9NRL3 753 aa28.97■■■□□ 2.23
RITA1-203ENST00000552495 PROSER3Q2NL68 480 aa28.96■■■□□ 2.23
RITA1-203ENST00000552495 ZNF496Q96IT1 587 aaPredicted RBP28.95■■■□□ 2.23
RITA1-203ENST00000552495 FMNL2Q96PY5 1086 aa28.95■■■□□ 2.23
RITA1-203ENST00000552495 SNRPA1P09661 255 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms