RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-233	ENST00000552433	GTF2E1	P29083	439 aa	Predicted RBP	10.91	□□□□□ -0.66
LETMD1-233	ENST00000552433	C4orf17	Q53FE4	359 aa		10.91	□□□□□ -0.66
LETMD1-233	ENST00000552433	GMCL1	Q96IK5	515 aa		10.91	□□□□□ -0.66
LETMD1-233	ENST00000552433	ALG2	Q9H553	416 aa		10.91	□□□□□ -0.66
LETMD1-233	ENST00000552433	RAD21	O60216	631 aa		10.9	□□□□□ -0.66
LETMD1-233	ENST00000552433	SCNN1D	P51172	638 aa		10.9	□□□□□ -0.66
LETMD1-233	ENST00000552433	TLR1	Q15399	786 aa		10.9	□□□□□ -0.66
LETMD1-233	ENST00000552433	GNAS	Q5JWF2	1037 aa		10.9	□□□□□ -0.66
LETMD1-233	ENST00000552433	LYPD4	Q6UWN0	246 aa		10.9	□□□□□ -0.66
LETMD1-233	ENST00000552433	SKI	P12755	728 aa		10.89	□□□□□ -0.67
LETMD1-233	ENST00000552433	UBTF	P17480	764 aa	Known RBP	10.89	□□□□□ -0.67
LETMD1-233	ENST00000552433	GDF10	P55107	478 aa		10.89	□□□□□ -0.67
LETMD1-233	ENST00000552433	SRSF11	Q05519	484 aa	Known RBP	10.89	□□□□□ -0.67
LETMD1-233	ENST00000552433	NUCKS1	Q9H1E3	243 aa	Known RBP	10.89	□□□□□ -0.67
LETMD1-233	ENST00000552433	SERTAD1	Q9UHV2	236 aa		10.89	□□□□□ -0.67
LETMD1-233	ENST00000552433	POM121C	A8CG34	1229 aa		10.87	□□□□□ -0.67
LETMD1-233	ENST00000552433	INHA	P05111	366 aa		10.87	□□□□□ -0.67
LETMD1-233	ENST00000552433	THBS1	P07996	1170 aa		10.87	□□□□□ -0.67
LETMD1-233	ENST00000552433	WWC1	Q8IX03	1113 aa		10.87	□□□□□ -0.67
LETMD1-233	ENST00000552433	MBIP	Q9NS73	344 aa		10.87	□□□□□ -0.67
LETMD1-233	ENST00000552433	ARHGEF15	O94989	841 aa		10.86	□□□□□ -0.67
LETMD1-233	ENST00000552433	FLII	Q13045	1269 aa		10.86	□□□□□ -0.67
LETMD1-233	ENST00000552433	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.86	□□□□□ -0.67
LETMD1-233	ENST00000552433	TRERF1	Q96PN7	1200 aa		10.86	□□□□□ -0.67
LETMD1-233	ENST00000552433	RUBCNL	Q9H714	662 aa		10.86	□□□□□ -0.67
LETMD1-233	ENST00000552433	IGF1R	P08069	1367 aa		10.86	□□□□□ -0.67
LETMD1-233	ENST00000552433		A0A1B0GTH6	734 aa		10.85	□□□□□ -0.67
LETMD1-233	ENST00000552433	MSX1	P28360	303 aa		10.85	□□□□□ -0.67
LETMD1-233	ENST00000552433	DEPDC4	Q8N2C3	294 aa		10.85	□□□□□ -0.67
LETMD1-233	ENST00000552433	RHBDD1	Q8TEB9	315 aa		10.85	□□□□□ -0.67
LETMD1-233	ENST00000552433	PCDHGA11	Q9Y5H2	935 aa		10.85	□□□□□ -0.67
LETMD1-233	ENST00000552433	TMEM229A	B2RXF0	380 aa		10.84	□□□□□ -0.67
LETMD1-233	ENST00000552433	CELA2B	P08218	269 aa	Predicted RBP	10.84	□□□□□ -0.67
LETMD1-233	ENST00000552433	SMTN	P53814	917 aa		10.83	□□□□□ -0.68
LETMD1-233	ENST00000552433	EML3	Q32P44	896 aa		10.83	□□□□□ -0.68
LETMD1-233	ENST00000552433	MX2	P20592	715 aa		10.82	□□□□□ -0.68
LETMD1-233	ENST00000552433	PLA2G4A	P47712	749 aa		10.82	□□□□□ -0.68
LETMD1-233	ENST00000552433	HDGFL1	Q5TGJ6	251 aa		10.82	□□□□□ -0.68
LETMD1-233	ENST00000552433	ADAMTS19	Q8TE59	1207 aa		10.82	□□□□□ -0.68
LETMD1-233	ENST00000552433	AIDA	Q96BJ3	306 aa		10.82	□□□□□ -0.68
LETMD1-233	ENST00000552433	CSB-PGBD3	P0DP91	1061 aa		10.81	□□□□□ -0.68
LETMD1-233	ENST00000552433	GSK3A	P49840	483 aa		10.81	□□□□□ -0.68
LETMD1-233	ENST00000552433	KCNMA1	Q12791	1236 aa		10.81	□□□□□ -0.68
LETMD1-233	ENST00000552433	NCOA4	Q13772	614 aa		10.81	□□□□□ -0.68
LETMD1-233	ENST00000552433	PGBD3	Q8N328	593 aa		10.81	□□□□□ -0.68
LETMD1-233	ENST00000552433	NOD1	Q9Y239	953 aa		10.81	□□□□□ -0.68
LETMD1-233	ENST00000552433	MARS	P56192	900 aa	Known RBP	10.8	□□□□□ -0.68
LETMD1-233	ENST00000552433	MAP3K10	Q02779	954 aa		10.8	□□□□□ -0.68
LETMD1-233	ENST00000552433	TMEM132A	Q24JP5	1023 aa		10.8	□□□□□ -0.68
LETMD1-233	ENST00000552433	CLUAP1	Q96AJ1	413 aa		10.8	□□□□□ -0.68
LETMD1-233	ENST00000552433	ACD	Q96AP0	544 aa		10.8	□□□□□ -0.68
LETMD1-233	ENST00000552433	GTF2I	P78347	998 aa		10.79	□□□□□ -0.68
LETMD1-233	ENST00000552433	UBAP2L	Q14157	1087 aa	Known RBP	10.79	□□□□□ -0.68
LETMD1-233	ENST00000552433	NIFK	Q9BYG3	293 aa	Known RBP	10.79	□□□□□ -0.68
LETMD1-233	ENST00000552433	USP3	Q9Y6I4	520 aa		10.79	□□□□□ -0.68
LETMD1-233	ENST00000552433		A6NJY4	79 aa		10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	USP17L5	A8MUK1	530 aa		10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	PSME1	Q06323	249 aa		10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	TBC1D9	Q6ZT07	1266 aa		10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	SLC4A9	Q96Q91	983 aa		10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	CFHR5	Q9BXR6	569 aa		10.78	□□□□□ -0.68
LETMD1-233	ENST00000552433	RANGAP1	P46060	587 aa	Predicted RBP	10.77	□□□□□ -0.69
LETMD1-233	ENST00000552433	RASSF7	Q02833	373 aa		10.77	□□□□□ -0.69
LETMD1-233	ENST00000552433	EFHC2	Q5JST6	749 aa		10.77	□□□□□ -0.69
LETMD1-233	ENST00000552433	NFATC2IP	Q8NCF5	419 aa		10.77	□□□□□ -0.69
LETMD1-233	ENST00000552433	IRS1	P35568	1242 aa		10.76	□□□□□ -0.69
LETMD1-233	ENST00000552433	ABHD17A	Q96GS6	310 aa		10.76	□□□□□ -0.69
LETMD1-233	ENST00000552433	CABP1	Q9NZU7	370 aa		10.76	□□□□□ -0.69
LETMD1-233	ENST00000552433	PARP3	Q9Y6F1	533 aa		10.76	□□□□□ -0.69
LETMD1-233	ENST00000552433	CDK2AP1	O14519	115 aa		10.75	□□□□□ -0.69
LETMD1-233	ENST00000552433	LZTS3	O60299	673 aa	Predicted RBP	10.75	□□□□□ -0.69
LETMD1-233	ENST00000552433	BCR	P11274	1271 aa		10.75	□□□□□ -0.69
LETMD1-233	ENST00000552433	KCTD17	Q8N5Z5	321 aa		10.75	□□□□□ -0.69
LETMD1-233	ENST00000552433	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.75	□□□□□ -0.69
LETMD1-233	ENST00000552433	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.75	□□□□□ -0.69
LETMD1-233	ENST00000552433	BNIP3L	O60238	219 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	GDF11	O95390	407 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	MTFR1	Q15390	333 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	TMEM151A	Q8N4L1	468 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	UCN2	Q96RP3	112 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	ENAM	Q9NRM1	1142 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	ZNF358	Q9NW07	568 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	PHF24	Q9UPV7	400 aa		10.74	□□□□□ -0.69
LETMD1-233	ENST00000552433	ATP4A	P20648	1035 aa		10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	LBR	Q14739	615 aa	Known RBP	10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	ZNF295-AS1	Q8N0V1	137 aa		10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	NEDD1	Q8NHV4	660 aa		10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	KLRG1	Q96E93	195 aa		10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	CRISPLD1	Q9H336	500 aa		10.73	□□□□□ -0.69
LETMD1-233	ENST00000552433	C2CD2L	O14523	706 aa		10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	BACH1	O14867	736 aa		10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	ZBTB7B	O15156	539 aa	Predicted RBP	10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	CTBS	Q01459	385 aa		10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	TBCEL	Q5QJ74	424 aa		10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	CNTNAP5	Q8WYK1	1306 aa		10.72	□□□□□ -0.69
LETMD1-233	ENST00000552433	RNF225	M0QZC1	329 aa	Predicted RBP	10.71	□□□□□ -0.69
LETMD1-233	ENST00000552433	TNS4	Q8IZW8	715 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms