RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 AK7Q96M32 723 aa23.54■■□□□ 1.36
CNOT2-236ENST00000552231 YY1P25490 414 aa23.53■■□□□ 1.36
CNOT2-236ENST00000552231 C1orf141Q5JVX7 400 aa23.53■■□□□ 1.36
CNOT2-236ENST00000552231 LINC00116Q8NCU8 138 aa23.52■■□□□ 1.36
CNOT2-236ENST00000552231 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
CNOT2-236ENST00000552231 ATP6V1AP38606 617 aa23.51■■□□□ 1.35
CNOT2-236ENST00000552231 C4BP0C0L5 1744 aa23.51■■□□□ 1.35
CNOT2-236ENST00000552231 CABP4P57796 275 aa23.5■■□□□ 1.35
CNOT2-236ENST00000552231 ITPK1Q13572 414 aa23.5■■□□□ 1.35
CNOT2-236ENST00000552231 YTHDC1Q96MU7 727 aaKnown RBP23.5■■□□□ 1.35
CNOT2-236ENST00000552231 TAF1LQ8IZX4 1826 aa23.5■■□□□ 1.35
CNOT2-236ENST00000552231 SSFA2P28290 1259 aa23.49■■□□□ 1.35
CNOT2-236ENST00000552231 AMIGO3Q86WK7 504 aa23.49■■□□□ 1.35
CNOT2-236ENST00000552231 DIAPH1O60610 1272 aaKnown RBP23.49■■□□□ 1.35
CNOT2-236ENST00000552231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.48■■□□□ 1.35
CNOT2-236ENST00000552231 AKAP4Q5JQC9 854 aa23.47■■□□□ 1.35
CNOT2-236ENST00000552231 MSL1Q68DK7 614 aa23.47■■□□□ 1.35
CNOT2-236ENST00000552231 ANP32CO43423 234 aa23.46■■□□□ 1.35
CNOT2-236ENST00000552231 SLC4A9Q96Q91 983 aa23.46■■□□□ 1.35
CNOT2-236ENST00000552231 KLHL34Q8N239 644 aa23.45■■□□□ 1.34
CNOT2-236ENST00000552231 GOLGB1Q14789 3259 aaKnown RBP23.45■■□□□ 1.34
CNOT2-236ENST00000552231 PHF14O94880 888 aa23.44■■□□□ 1.34
CNOT2-236ENST00000552231 HMOX1P09601 288 aa23.44■■□□□ 1.34
CNOT2-236ENST00000552231 NFATC2IPQ8NCF5 419 aa23.44■■□□□ 1.34
CNOT2-236ENST00000552231 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
CNOT2-236ENST00000552231 GNPATO15228 680 aa23.43■■□□□ 1.34
CNOT2-236ENST00000552231 RC3H1Q5TC82 1133 aaKnown RBP23.43■■□□□ 1.34
CNOT2-236ENST00000552231 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
CNOT2-236ENST00000552231 NLGN2Q8NFZ4 835 aa23.42■■□□□ 1.34
CNOT2-236ENST00000552231 GPR162Q16538 588 aa23.41■■□□□ 1.34
CNOT2-236ENST00000552231 UBR3Q6ZT12 1888 aa23.41■■□□□ 1.34
CNOT2-236ENST00000552231 RTCBQ9Y3I0 505 aaKnown RBP23.4■■□□□ 1.34
CNOT2-236ENST00000552231 CD2APQ9Y5K6 639 aa23.4■■□□□ 1.34
CNOT2-236ENST00000552231 ZNF831Q5JPB2 1677 aa23.4■■□□□ 1.34
CNOT2-236ENST00000552231 CNTNAP4Q9C0A0 1308 aa23.4■■□□□ 1.34
CNOT2-236ENST00000552231 COL3A1P02461 1466 aaPredicted RBP23.39■■□□□ 1.34
CNOT2-236ENST00000552231 CCER2I3L3R5 266 aa23.39■■□□□ 1.34
CNOT2-236ENST00000552231 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.34
CNOT2-236ENST00000552231 MTHFSDQ2M296 383 aaKnown RBP23.38■■□□□ 1.33
CNOT2-236ENST00000552231 SLC52A2Q9HAB3 445 aa23.38■■□□□ 1.33
CNOT2-236ENST00000552231 RNMTO43148 476 aaKnown RBP23.38■■□□□ 1.33
CNOT2-236ENST00000552231 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
CNOT2-236ENST00000552231 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
CNOT2-236ENST00000552231 LGR6Q9HBX8 967 aa23.38■■□□□ 1.33
CNOT2-236ENST00000552231 ADRA2BP18089 450 aa23.37■■□□□ 1.33
CNOT2-236ENST00000552231 RPS6KA4O75676 772 aa23.36■■□□□ 1.33
CNOT2-236ENST00000552231 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
CNOT2-236ENST00000552231 ARHGEF1Q92888 912 aaKnown RBP23.33■■□□□ 1.33
CNOT2-236ENST00000552231 CFAP53Q96M91 514 aa23.33■■□□□ 1.33
CNOT2-236ENST00000552231 MRC1P22897 1456 aa23.32■■□□□ 1.32
CNOT2-236ENST00000552231 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
CNOT2-236ENST00000552231 GRIN3BO60391 1043 aa23.32■■□□□ 1.32
CNOT2-236ENST00000552231 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
CNOT2-236ENST00000552231 NLGN1Q8N2Q7 840 aa23.32■■□□□ 1.32
CNOT2-236ENST00000552231 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
CNOT2-236ENST00000552231 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
CNOT2-236ENST00000552231 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
CNOT2-236ENST00000552231 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
CNOT2-236ENST00000552231 PPP2R1AP30153 589 aa23.29■■□□□ 1.32
CNOT2-236ENST00000552231 RFC4P35249 363 aa23.29■■□□□ 1.32
CNOT2-236ENST00000552231 MMP10P09238 476 aa23.28■■□□□ 1.32
CNOT2-236ENST00000552231 ZNF784Q8NCA9 323 aaPredicted RBP23.28■■□□□ 1.32
CNOT2-236ENST00000552231 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
CNOT2-236ENST00000552231 ADAMTS7Q9UKP4 1686 aa23.28■■□□□ 1.32
CNOT2-236ENST00000552231 GYS1P13807 737 aa23.28■■□□□ 1.32
CNOT2-236ENST00000552231 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
CNOT2-236ENST00000552231 GNAT3A8MTJ3 354 aa23.27■■□□□ 1.32
CNOT2-236ENST00000552231 SLC39A6Q13433 755 aa23.27■■□□□ 1.32
CNOT2-236ENST00000552231 INTS5Q6P9B9 1019 aaKnown RBP23.27■■□□□ 1.32
CNOT2-236ENST00000552231 VSIG10Q8N0Z9 540 aa23.26■■□□□ 1.31
CNOT2-236ENST00000552231 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
CNOT2-236ENST00000552231 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
CNOT2-236ENST00000552231 IL17REQ8NFR9 667 aa23.25■■□□□ 1.31
CNOT2-236ENST00000552231 MYH14Q7Z406 1995 aaKnown RBP23.24■■□□□ 1.31
CNOT2-236ENST00000552231 CHD4Q14839 1912 aa23.24■■□□□ 1.31
CNOT2-236ENST00000552231 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
CNOT2-236ENST00000552231 PRKAR2BP31323 418 aa23.23■■□□□ 1.31
CNOT2-236ENST00000552231 CCDC87Q9NVE4 849 aa23.23■■□□□ 1.31
CNOT2-236ENST00000552231 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
CNOT2-236ENST00000552231 TJP1Q07157 1748 aa23.22■■□□□ 1.31
CNOT2-236ENST00000552231 KCPQ6ZWJ8 1503 aa23.22■■□□□ 1.31
CNOT2-236ENST00000552231 TEFQ10587 303 aa23.22■■□□□ 1.31
CNOT2-236ENST00000552231 USP42Q9H9J4 1324 aaKnown RBP23.21■■□□□ 1.31
CNOT2-236ENST00000552231 FCHSD2O94868 740 aa23.21■■□□□ 1.31
CNOT2-236ENST00000552231 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.3
CNOT2-236ENST00000552231 TGFB2P61812 414 aa23.2■■□□□ 1.3
CNOT2-236ENST00000552231 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.3
CNOT2-236ENST00000552231 TTC5Q8N0Z6 440 aa23.2■■□□□ 1.3
CNOT2-236ENST00000552231 PARP3Q9Y6F1 533 aa23.2■■□□□ 1.3
CNOT2-236ENST00000552231 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
CNOT2-236ENST00000552231 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
CNOT2-236ENST00000552231 SRP68Q9UHB9 627 aaKnown RBP23.19■■□□□ 1.3
CNOT2-236ENST00000552231 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
CNOT2-236ENST00000552231 FKBP8Q14318 412 aa23.18■■□□□ 1.3
CNOT2-236ENST00000552231 GTF3C3Q9Y5Q9 886 aa23.18■■□□□ 1.3
CNOT2-236ENST00000552231 C10orf71Q711Q0 1435 aa23.17■■□□□ 1.3
CNOT2-236ENST00000552231 ZPR1O75312 459 aa23.16■■□□□ 1.3
CNOT2-236ENST00000552231 STARD3NLO95772 234 aa23.16■■□□□ 1.3
CNOT2-236ENST00000552231 TEX13AQ9BXU3 409 aaPredicted RBP23.16■■□□□ 1.3
CNOT2-236ENST00000552231 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms