RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 BAP1Q92560 729 aa8.79□□□□□ -1
PPFIA2-226ENST00000552020 FOXJ1Q92949 421 aa8.79□□□□□ -1
PPFIA2-226ENST00000552020 WDR62O43379 1518 aa8.79□□□□□ -1
PPFIA2-226ENST00000552020 WEE1P30291 646 aa8.78□□□□□ -1
PPFIA2-226ENST00000552020 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
PPFIA2-226ENST00000552020 ADH1BP00325 375 aa8.77□□□□□ -1.01
PPFIA2-226ENST00000552020 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
PPFIA2-226ENST00000552020 NAALADL2Q58DX5 795 aa8.77□□□□□ -1.01
PPFIA2-226ENST00000552020 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1.01
PPFIA2-226ENST00000552020 HELQQ8TDG4 1101 aa8.77□□□□□ -1.01
PPFIA2-226ENST00000552020 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1.01
PPFIA2-226ENST00000552020 COL19A1Q14993 1142 aa8.76□□□□□ -1.01
PPFIA2-226ENST00000552020 ECM1Q16610 540 aa8.76□□□□□ -1.01
PPFIA2-226ENST00000552020 Q6ZNB5 142 aa8.76□□□□□ -1.01
PPFIA2-226ENST00000552020 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
PPFIA2-226ENST00000552020 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
PPFIA2-226ENST00000552020 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
PPFIA2-226ENST00000552020 FAM13AO94988 1023 aa8.75□□□□□ -1.01
PPFIA2-226ENST00000552020 P4HBP07237 508 aaKnown RBP8.75□□□□□ -1.01
PPFIA2-226ENST00000552020 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
PPFIA2-226ENST00000552020 M0R2N6 131 aa8.74□□□□□ -1.01
PPFIA2-226ENST00000552020 NDUFB5O43674 189 aa8.74□□□□□ -1.01
PPFIA2-226ENST00000552020 ZNF511Q8NB15 262 aa8.74□□□□□ -1.01
PPFIA2-226ENST00000552020 MPSTP25325 297 aa8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 AAMPQ13685 434 aa8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 SF3A1Q15459 793 aaKnown RBP8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 SCG3Q8WXD2 468 aaKnown RBP8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 BACH2Q9BYV9 841 aa8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 BRPF3Q9ULD4 1205 aa8.73□□□□□ -1.01
PPFIA2-226ENST00000552020 ESPNB1AK53 854 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 FOXO3O43524 673 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 IGFBP4P22692 258 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 XPCQ01831 940 aaPredicted RBP8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 C9orf131Q5VYM1 1079 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
PPFIA2-226ENST00000552020 ZPR1O75312 459 aa8.71□□□□□ -1.02
PPFIA2-226ENST00000552020 MAPK8P45983 427 aa8.71□□□□□ -1.02
PPFIA2-226ENST00000552020 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
PPFIA2-226ENST00000552020 RBCK1Q9BYM8 510 aa8.71□□□□□ -1.02
PPFIA2-226ENST00000552020 MRS2Q9HD23 443 aa8.71□□□□□ -1.02
PPFIA2-226ENST00000552020 CDV3Q9UKY7 258 aaKnown RBP8.71□□□□□ -1.02
PPFIA2-226ENST00000552020 SCAMP3O14828 347 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-226ENST00000552020 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
PPFIA2-226ENST00000552020 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
PPFIA2-226ENST00000552020 UBXN4Q92575 508 aa8.7□□□□□ -1.02
PPFIA2-226ENST00000552020 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
PPFIA2-226ENST00000552020 SCTRP47872 440 aa8.69□□□□□ -1.02
PPFIA2-226ENST00000552020 HDLBPQ00341 1268 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-226ENST00000552020 KCTD15Q96SI1 283 aaPredicted RBP8.69□□□□□ -1.02
PPFIA2-226ENST00000552020 C1QTNF2Q9BXJ5 285 aa8.69□□□□□ -1.02
PPFIA2-226ENST00000552020 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
PPFIA2-226ENST00000552020 BACH1O14867 736 aa8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 LDHBP07195 334 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 MRPL58Q14197 206 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 TMEM87AQ8NBN3 555 aa8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 FAM161BQ96MY7 647 aa8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 FCF1Q9Y324 198 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 CADPSQ9ULU8 1353 aa8.68□□□□□ -1.02
PPFIA2-226ENST00000552020 TMEM229AB2RXF0 380 aa8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 TREHO43280 583 aa8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 SMARCA5O60264 1052 aaPredicted RBP8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 STAU1O95793 577 aaKnown RBP8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 GDF10P55107 478 aa8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 C16orf46Q6P387 395 aa8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 MTRQ99707 1265 aa8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.67□□□□□ -1.02
PPFIA2-226ENST00000552020 CEP164Q9UPV0 1460 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 ERVH48-1M5A8F1 160 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 NPR3P17342 541 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 PLCB3Q01970 1234 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 SAP130Q9H0E3 1048 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 TSPAN10Q9H1Z9 355 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 VTI1BQ9UEU0 232 aa8.66□□□□□ -1.02
PPFIA2-226ENST00000552020 GFRA3O60609 400 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 EIF1AXP47813 144 aaKnown RBP8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 FGD1P98174 961 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 ATP2B2Q01814 1243 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 INTS6LQ5JSJ4 861 aaKnown RBP8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 ALKBH2Q6NS38 261 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 VASH1Q7L8A9 365 aaPredicted RBP8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 PARP2Q9UGN5 583 aa8.65□□□□□ -1.02
PPFIA2-226ENST00000552020 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
PPFIA2-226ENST00000552020 S1PR4O95977 384 aa8.64□□□□□ -1.03
PPFIA2-226ENST00000552020 ITGAEP38570 1179 aa8.64□□□□□ -1.03
PPFIA2-226ENST00000552020 SH3BP2P78314 561 aa8.64□□□□□ -1.03
PPFIA2-226ENST00000552020 EHHADHQ08426 723 aa8.64□□□□□ -1.03
PPFIA2-226ENST00000552020 PSMD2Q13200 908 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms