RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 TEFQ10587 303 aa9.9□□□□□ -0.82
USP44-206ENST00000551837 DCTN1Q14203 1278 aa9.9□□□□□ -0.82
USP44-206ENST00000551837 CHMP4AQ9BY43 222 aa9.9□□□□□ -0.82
USP44-206ENST00000551837 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.82
USP44-206ENST00000551837 PLCH1Q4KWH8 1693 aa9.9□□□□□ -0.83
USP44-206ENST00000551837 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
USP44-206ENST00000551837 MARCH10Q8NA82 808 aaPredicted RBP9.89□□□□□ -0.83
USP44-206ENST00000551837 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
USP44-206ENST00000551837 CABP4P57796 275 aa9.88□□□□□ -0.83
USP44-206ENST00000551837 SP7Q8TDD2 431 aaPredicted RBP9.88□□□□□ -0.83
USP44-206ENST00000551837 THUMPD2Q9BTF0 503 aaKnown RBP9.88□□□□□ -0.83
USP44-206ENST00000551837 RGPD2P0DJD1 1756 aa9.88□□□□□ -0.83
USP44-206ENST00000551837 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
USP44-206ENST00000551837 VAMP4O75379 141 aa9.87□□□□□ -0.83
USP44-206ENST00000551837 MBIPQ9NS73 344 aa9.87□□□□□ -0.83
USP44-206ENST00000551837 HEG1Q9ULI3 1381 aa9.87□□□□□ -0.83
USP44-206ENST00000551837 SENP3-EIF4A1A0A087X0R7 540 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 HOXB7P09629 217 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
USP44-206ENST00000551837 TNS2Q63HR2 1409 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 ZNF790Q6PG37 636 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 PKD1L3Q7Z443 1732 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 TSPYL4Q9UJ04 414 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 ADAMTS7Q9UKP4 1686 aa9.86□□□□□ -0.83
USP44-206ENST00000551837 FANCIQ9NVI1 1328 aa9.85□□□□□ -0.83
USP44-206ENST00000551837 PARP4Q9UKK3 1724 aaKnown RBP9.85□□□□□ -0.83
USP44-206ENST00000551837 KDM6AO15550 1401 aaPredicted RBP9.85□□□□□ -0.83
USP44-206ENST00000551837 HMGB2P26583 209 aaKnown RBP9.85□□□□□ -0.83
USP44-206ENST00000551837 EIF4A1P60842 406 aaKnown RBP9.85□□□□□ -0.83
USP44-206ENST00000551837 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
USP44-206ENST00000551837 FAM196AQ6ZSG2 479 aa9.85□□□□□ -0.83
USP44-206ENST00000551837 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
USP44-206ENST00000551837 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
USP44-206ENST00000551837 GLI3P10071 1580 aa9.84□□□□□ -0.83
USP44-206ENST00000551837 PRIM1P49642 420 aaKnown RBP9.84□□□□□ -0.83
USP44-206ENST00000551837 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
USP44-206ENST00000551837 ALDH1L2Q3SY69 923 aa9.84□□□□□ -0.83
USP44-206ENST00000551837 KRT27Q7Z3Y8 459 aa9.84□□□□□ -0.83
USP44-206ENST00000551837 PIGBQ92521 554 aa9.84□□□□□ -0.83
USP44-206ENST00000551837 TEX13AQ9BXU3 409 aaPredicted RBP9.84□□□□□ -0.83
USP44-206ENST00000551837 TMOD3Q9NYL9 352 aa9.84□□□□□ -0.83
USP44-206ENST00000551837 GIGYF1O75420 1035 aaPredicted RBP9.83□□□□□ -0.84
USP44-206ENST00000551837 TWISTNBQ3B726 338 aaPredicted RBP9.83□□□□□ -0.84
USP44-206ENST00000551837 C8orf58Q8NAV2 365 aa9.83□□□□□ -0.84
USP44-206ENST00000551837 TSR2Q969E8 191 aaKnown RBP9.83□□□□□ -0.84
USP44-206ENST00000551837 MIS18AQ9NYP9 233 aa9.83□□□□□ -0.84
USP44-206ENST00000551837 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
USP44-206ENST00000551837 SMARCC1Q92922 1105 aaPredicted RBP9.82□□□□□ -0.84
USP44-206ENST00000551837 FMNL2Q96PY5 1086 aa9.82□□□□□ -0.84
USP44-206ENST00000551837 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
USP44-206ENST00000551837 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
USP44-206ENST00000551837 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
USP44-206ENST00000551837 MRC1P22897 1456 aa9.82□□□□□ -0.84
USP44-206ENST00000551837 THSD7AQ9UPZ6 1657 aa9.82□□□□□ -0.84
USP44-206ENST00000551837 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
USP44-206ENST00000551837 SNRPA1P09661 255 aaKnown RBP9.81□□□□□ -0.84
USP44-206ENST00000551837 TTC5Q8N0Z6 440 aa9.81□□□□□ -0.84
USP44-206ENST00000551837 TSPYL6Q8N831 410 aa9.81□□□□□ -0.84
USP44-206ENST00000551837 ARHGAP45Q92619 1136 aa9.81□□□□□ -0.84
USP44-206ENST00000551837 A0A0G2JS52 829 aa9.8□□□□□ -0.84
USP44-206ENST00000551837 KCNQ3O43525 872 aa9.8□□□□□ -0.84
USP44-206ENST00000551837 MYT1Q01538 1121 aa9.8□□□□□ -0.84
USP44-206ENST00000551837 CCDC30Q5VVM6 783 aa9.8□□□□□ -0.84
USP44-206ENST00000551837 ZNF496Q96IT1 587 aaPredicted RBP9.8□□□□□ -0.84
USP44-206ENST00000551837 DLG5Q8TDM6 1919 aa9.8□□□□□ -0.84
USP44-206ENST00000551837 PLSCR1O15162 318 aa9.79□□□□□ -0.84
USP44-206ENST00000551837 KCNQ2O43526 872 aa9.79□□□□□ -0.84
USP44-206ENST00000551837 SLC39A6Q13433 755 aa9.79□□□□□ -0.84
USP44-206ENST00000551837 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
USP44-206ENST00000551837 ERBB4Q15303 1308 aa9.79□□□□□ -0.84
USP44-206ENST00000551837 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
USP44-206ENST00000551837 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
USP44-206ENST00000551837 IPO8O15397 1037 aaKnown RBP9.78□□□□□ -0.84
USP44-206ENST00000551837 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
USP44-206ENST00000551837 SCN11AQ9UI33 1791 aa9.78□□□□□ -0.84
USP44-206ENST00000551837 SHANK3Q9BYB0 1731 aa9.77□□□□□ -0.85
USP44-206ENST00000551837 KRT24Q2M2I5 525 aa9.77□□□□□ -0.85
USP44-206ENST00000551837 CCDC125Q86Z20 511 aa9.77□□□□□ -0.85
USP44-206ENST00000551837 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
USP44-206ENST00000551837 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
USP44-206ENST00000551837 SYTL4Q96C24 671 aaPredicted RBP9.77□□□□□ -0.85
USP44-206ENST00000551837 ACSBG1Q96GR2 724 aa9.77□□□□□ -0.85
USP44-206ENST00000551837 DDX21Q9NR30 783 aaKnown RBP eCLIP9.77□□□□□ -0.85
USP44-206ENST00000551837 DBF4Q9UBU7 674 aaPredicted RBP9.77□□□□□ -0.85
USP44-206ENST00000551837 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
USP44-206ENST00000551837 WNK3Q9BYP7 1800 aa9.77□□□□□ -0.85
USP44-206ENST00000551837 STARD3NLO95772 234 aa9.76□□□□□ -0.85
USP44-206ENST00000551837 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
USP44-206ENST00000551837 MS4A1P11836 297 aa9.76□□□□□ -0.85
USP44-206ENST00000551837 PDE3AQ14432 1141 aa9.76□□□□□ -0.85
USP44-206ENST00000551837 SSH1Q8WYL5 1049 aa9.76□□□□□ -0.85
USP44-206ENST00000551837 LOC102724428A0A0B4J2F2 783 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 BCAR3O75815 825 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 SIK1P57059 783 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 PDIA6Q15084 440 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 SLC27A3Q5K4L6 730 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
USP44-206ENST00000551837 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 HYPKQ9NX55 129 aa9.75□□□□□ -0.85
USP44-206ENST00000551837 SIPA1L3O60292 1781 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms