RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-222ENST00000551339 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
PFKM-222ENST00000551339 AK7Q96M32 723 aa13.05□□□□□ -0.32
PFKM-222ENST00000551339 MAP3K5Q99683 1374 aa13.05□□□□□ -0.32
PFKM-222ENST00000551339 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
PFKM-222ENST00000551339 HMOX1P09601 288 aa13.04□□□□□ -0.32
PFKM-222ENST00000551339 CABP4P57796 275 aa13.04□□□□□ -0.32
PFKM-222ENST00000551339 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
PFKM-222ENST00000551339 SLC4A9Q96Q91 983 aa13.04□□□□□ -0.32
PFKM-222ENST00000551339 C5P01031 1676 aa13.04□□□□□ -0.32
PFKM-222ENST00000551339 COL24A1Q17RW2 1714 aa13.04□□□□□ -0.32
PFKM-222ENST00000551339 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
PFKM-222ENST00000551339 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
PFKM-222ENST00000551339 TAF1LQ8IZX4 1826 aa13.03□□□□□ -0.32
PFKM-222ENST00000551339 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
PFKM-222ENST00000551339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
PFKM-222ENST00000551339 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
PFKM-222ENST00000551339 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
PFKM-222ENST00000551339 PHF14O94880 888 aa13.01□□□□□ -0.33
PFKM-222ENST00000551339 SSFA2P28290 1259 aa13.01□□□□□ -0.33
PFKM-222ENST00000551339 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
PFKM-222ENST00000551339 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
PFKM-222ENST00000551339 GNPATO15228 680 aa13□□□□□ -0.33
PFKM-222ENST00000551339 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
PFKM-222ENST00000551339 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
PFKM-222ENST00000551339 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
PFKM-222ENST00000551339 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
PFKM-222ENST00000551339 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
PFKM-222ENST00000551339 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
PFKM-222ENST00000551339 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
PFKM-222ENST00000551339 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
PFKM-222ENST00000551339 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
PFKM-222ENST00000551339 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
PFKM-222ENST00000551339 GPR162Q16538 588 aa12.97□□□□□ -0.33
PFKM-222ENST00000551339 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
PFKM-222ENST00000551339 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
PFKM-222ENST00000551339 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
PFKM-222ENST00000551339 CNTNAP4Q9C0A0 1308 aa12.96□□□□□ -0.33
PFKM-222ENST00000551339 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
PFKM-222ENST00000551339 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
PFKM-222ENST00000551339 CFAP53Q96M91 514 aa12.96□□□□□ -0.33
PFKM-222ENST00000551339 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
PFKM-222ENST00000551339 ADRA2BP18089 450 aa12.95□□□□□ -0.34
PFKM-222ENST00000551339 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
PFKM-222ENST00000551339 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
PFKM-222ENST00000551339 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
PFKM-222ENST00000551339 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
PFKM-222ENST00000551339 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
PFKM-222ENST00000551339 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
PFKM-222ENST00000551339 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
PFKM-222ENST00000551339 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
PFKM-222ENST00000551339 DNAJC10Q8IXB1 793 aa12.93□□□□□ -0.34
PFKM-222ENST00000551339 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
PFKM-222ENST00000551339 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
PFKM-222ENST00000551339 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
PFKM-222ENST00000551339 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
PFKM-222ENST00000551339 MRC1P22897 1456 aa12.92□□□□□ -0.34
PFKM-222ENST00000551339 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
PFKM-222ENST00000551339 MMP10P09238 476 aa12.92□□□□□ -0.34
PFKM-222ENST00000551339 GYS1P13807 737 aa12.92□□□□□ -0.34
PFKM-222ENST00000551339 YBX3P16989 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
PFKM-222ENST00000551339 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
PFKM-222ENST00000551339 RFC4P35249 363 aa12.92□□□□□ -0.34
PFKM-222ENST00000551339 ZNF784Q8NCA9 323 aaPredicted RBP12.92□□□□□ -0.34
PFKM-222ENST00000551339 UTRNP46939 3433 aa12.91□□□□□ -0.34
PFKM-222ENST00000551339 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
PFKM-222ENST00000551339 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
PFKM-222ENST00000551339 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
PFKM-222ENST00000551339 RALBP1Q15311 655 aa12.91□□□□□ -0.34
PFKM-222ENST00000551339 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
PFKM-222ENST00000551339 MYH14Q7Z406 1995 aaKnown RBP12.9□□□□□ -0.34
PFKM-222ENST00000551339 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
PFKM-222ENST00000551339 FCHSD2O94868 740 aa12.9□□□□□ -0.34
PFKM-222ENST00000551339 CYP19A1P11511 503 aaPredicted RBP12.9□□□□□ -0.34
PFKM-222ENST00000551339 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
PFKM-222ENST00000551339 TEFQ10587 303 aa12.89□□□□□ -0.35
PFKM-222ENST00000551339 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
PFKM-222ENST00000551339 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
PFKM-222ENST00000551339 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
PFKM-222ENST00000551339 TJP1Q07157 1748 aa12.88□□□□□ -0.35
PFKM-222ENST00000551339 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
PFKM-222ENST00000551339 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
PFKM-222ENST00000551339 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
PFKM-222ENST00000551339 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
PFKM-222ENST00000551339 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
PFKM-222ENST00000551339 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
PFKM-222ENST00000551339 FKBP8Q14318 412 aa12.87□□□□□ -0.35
PFKM-222ENST00000551339 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
PFKM-222ENST00000551339 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
PFKM-222ENST00000551339 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
PFKM-222ENST00000551339 ZBTB1Q9Y2K1 713 aa12.86□□□□□ -0.35
PFKM-222ENST00000551339 PARP3Q9Y6F1 533 aa12.86□□□□□ -0.35
PFKM-222ENST00000551339 KCNQ3O43525 872 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 STARD3NLO95772 234 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 TM4SF1P30408 202 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 TGFB2P61812 414 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 MCM10Q7L590 875 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
PFKM-222ENST00000551339 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
PFKM-222ENST00000551339 CHD4Q14839 1912 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms