RNA–Protein interactions for RNA: ENST00000551139.6

RNF10-225, Transcript of ring finger protein 10, human

TSL 3

Gene RNF10, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-225	ENST00000551139	TRAPPC3L	Q5T215	181 aa		13.76	□□□□□ -0.21
RNF10-225	ENST00000551139	RTCB	Q9Y3I0	505 aa	Known RBP	13.76	□□□□□ -0.21
RNF10-225	ENST00000551139	NCAPD2	Q15021	1401 aa		13.75	□□□□□ -0.21
RNF10-225	ENST00000551139	HSP90AB1	P08238	724 aa	Known RBP	13.75	□□□□□ -0.21
RNF10-225	ENST00000551139	MMP10	P09238	476 aa		13.75	□□□□□ -0.21
RNF10-225	ENST00000551139	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.75	□□□□□ -0.21
RNF10-225	ENST00000551139	UBR3	Q6ZT12	1888 aa		13.75	□□□□□ -0.21
RNF10-225	ENST00000551139	ERVV-2	B6SEH9	535 aa		13.74	□□□□□ -0.21
RNF10-225	ENST00000551139	RFC4	P35249	363 aa		13.73	□□□□□ -0.21
RNF10-225	ENST00000551139	CABP4	P57796	275 aa		13.73	□□□□□ -0.21
RNF10-225	ENST00000551139	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
RNF10-225	ENST00000551139	NLGN1	Q8N2Q7	840 aa		13.73	□□□□□ -0.21
RNF10-225	ENST00000551139	DCAF5	Q96JK2	942 aa		13.73	□□□□□ -0.21
RNF10-225	ENST00000551139	PANK3	Q9H999	370 aa		13.73	□□□□□ -0.21
RNF10-225	ENST00000551139	C1orf141	Q5JVX7	400 aa		13.72	□□□□□ -0.21
RNF10-225	ENST00000551139	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF10-225	ENST00000551139	ANKRD26	Q9UPS8	1709 aa		13.72	□□□□□ -0.21
RNF10-225	ENST00000551139		A0A0G2JLW4	131 aa		13.71	□□□□□ -0.21
RNF10-225	ENST00000551139	MTHFS	P49914	203 aa		13.71	□□□□□ -0.21
RNF10-225	ENST00000551139	AMOT	Q4VCS5	1084 aa		13.71	□□□□□ -0.21
RNF10-225	ENST00000551139	MORC1	Q86VD1	984 aa		13.71	□□□□□ -0.21
RNF10-225	ENST00000551139	ARHGEF1	Q92888	912 aa	Known RBP	13.71	□□□□□ -0.21
RNF10-225	ENST00000551139	BCS1L	Q9Y276	419 aa		13.71	□□□□□ -0.21
RNF10-225	ENST00000551139	PTCD1	O75127	700 aa	Known RBP	13.7	□□□□□ -0.22
RNF10-225	ENST00000551139	HSPA5	P11021	654 aa	Known RBP	13.7	□□□□□ -0.22
RNF10-225	ENST00000551139	TGFB2	P61812	414 aa		13.7	□□□□□ -0.22
RNF10-225	ENST00000551139	RC3H1	Q5TC82	1133 aa	Known RBP	13.7	□□□□□ -0.22
RNF10-225	ENST00000551139	CCDC87	Q9NVE4	849 aa		13.7	□□□□□ -0.22
RNF10-225	ENST00000551139	PARP3	Q9Y6F1	533 aa		13.7	□□□□□ -0.22
RNF10-225	ENST00000551139	RPS6KA4	O75676	772 aa		13.69	□□□□□ -0.22
RNF10-225	ENST00000551139	ADRA2B	P18089	450 aa		13.69	□□□□□ -0.22
RNF10-225	ENST00000551139	ARHGAP27	Q6ZUM4	889 aa		13.69	□□□□□ -0.22
RNF10-225	ENST00000551139	SLC4A9	Q96Q91	983 aa		13.69	□□□□□ -0.22
RNF10-225	ENST00000551139	ADCY9	O60503	1353 aa		13.69	□□□□□ -0.22
RNF10-225	ENST00000551139	CLSPN	Q9HAW4	1339 aa		13.68	□□□□□ -0.22
RNF10-225	ENST00000551139	HSPA6	P17066	643 aa		13.68	□□□□□ -0.22
RNF10-225	ENST00000551139	NFATC2IP	Q8NCF5	419 aa		13.68	□□□□□ -0.22
RNF10-225	ENST00000551139	CNTNAP4	Q9C0A0	1308 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	FCHSD2	O94868	740 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	GYS1	P13807	737 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	SULT6B1	Q6IMI4	303 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	AEBP1	Q8IUX7	1158 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	KNSTRN	Q9Y448	316 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	PLEKHG2	Q9H7P9	1386 aa		13.67	□□□□□ -0.22
RNF10-225	ENST00000551139	CEP350	Q5VT06	3117 aa		13.66	□□□□□ -0.22
RNF10-225	ENST00000551139	CIC	Q96RK0	1608 aa	Predicted RBP	13.66	□□□□□ -0.22
RNF10-225	ENST00000551139	DPEP1	P16444	411 aa		13.66	□□□□□ -0.22
RNF10-225	ENST00000551139	KDR	P35968	1356 aa		13.66	□□□□□ -0.22
RNF10-225	ENST00000551139	CRKL	P46109	303 aa	Known RBP	13.65	□□□□□ -0.22
RNF10-225	ENST00000551139	PXDNL	A1KZ92	1463 aa		13.65	□□□□□ -0.22
RNF10-225	ENST00000551139	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF10-225	ENST00000551139	KIF3C	O14782	793 aa		13.64	□□□□□ -0.23
RNF10-225	ENST00000551139	IFFO2	Q5TF58	517 aa		13.64	□□□□□ -0.23
RNF10-225	ENST00000551139	KDM6A	O15550	1401 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF10-225	ENST00000551139	CCER1	Q8TC90	406 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF10-225	ENST00000551139	PIM2	Q9P1W9	311 aa		13.63	□□□□□ -0.23
RNF10-225	ENST00000551139	SRP68	Q9UHB9	627 aa	Known RBP	13.63	□□□□□ -0.23
RNF10-225	ENST00000551139	ZPR1	O75312	459 aa		13.62	□□□□□ -0.23
RNF10-225	ENST00000551139	C10orf71	Q711Q0	1435 aa		13.62	□□□□□ -0.23
RNF10-225	ENST00000551139	TOMM70	O94826	608 aa		13.61	□□□□□ -0.23
RNF10-225	ENST00000551139	IL13	P35225	146 aa		13.61	□□□□□ -0.23
RNF10-225	ENST00000551139	FKBP8	Q14318	412 aa		13.61	□□□□□ -0.23
RNF10-225	ENST00000551139	DALRD3	Q5D0E6	543 aa	Known RBP	13.61	□□□□□ -0.23
RNF10-225	ENST00000551139	AKAP4	Q5JQC9	854 aa		13.61	□□□□□ -0.23
RNF10-225	ENST00000551139	KIF13B	Q9NQT8	1826 aa		13.61	□□□□□ -0.23
RNF10-225	ENST00000551139	ZNF831	Q5JPB2	1677 aa		13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	C4A	P0C0L4	1744 aa		13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	COL5A3	P25940	1745 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	C9orf131	Q5VYM1	1079 aa		13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	USP42	Q9H9J4	1324 aa	Known RBP	13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	MYH14	Q7Z406	1995 aa	Known RBP	13.6	□□□□□ -0.23
RNF10-225	ENST00000551139	HMOX1	P09601	288 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	KCNA3	P22001	575 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	APLP1	P51693	650 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	INTS5	Q6P9B9	1019 aa	Known RBP	13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	DNAJC10	Q8IXB1	793 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	SLC52A2	Q9HAB3	445 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	LGR6	Q9HBX8	967 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	NMRK2	Q9NPI5	230 aa		13.59	□□□□□ -0.23
RNF10-225	ENST00000551139	CHRNA5	P30532	468 aa		13.58	□□□□□ -0.24
RNF10-225	ENST00000551139	DDR1	Q08345	913 aa		13.58	□□□□□ -0.24
RNF10-225	ENST00000551139	SLC39A6	Q13433	755 aa		13.58	□□□□□ -0.24
RNF10-225	ENST00000551139	USPL1	Q5W0Q7	1092 aa		13.58	□□□□□ -0.24
RNF10-225	ENST00000551139	RNF181	Q9P0P0	153 aa		13.57	□□□□□ -0.24
RNF10-225	ENST00000551139	KIAA1551	Q9HCM1	1747 aa		13.56	□□□□□ -0.24
RNF10-225	ENST00000551139	POLRMT	O00411	1230 aa	Known RBP	13.56	□□□□□ -0.24
RNF10-225	ENST00000551139	RNMT	O43148	476 aa	Known RBP	13.56	□□□□□ -0.24
RNF10-225	ENST00000551139	TM4SF1	P30408	202 aa		13.56	□□□□□ -0.24
RNF10-225	ENST00000551139	CNGB1	Q14028	1251 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF10-225	ENST00000551139	KDM2B	Q8NHM5	1336 aa		13.56	□□□□□ -0.24
RNF10-225	ENST00000551139	DIAPH1	O60610	1272 aa	Known RBP	13.55	□□□□□ -0.24
RNF10-225	ENST00000551139	CYP19A1	P11511	503 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF10-225	ENST00000551139	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF10-225	ENST00000551139	CC2D1B	Q5T0F9	858 aa	Known RBP	13.55	□□□□□ -0.24
RNF10-225	ENST00000551139	SCN11A	Q9UI33	1791 aa		13.54	□□□□□ -0.24
RNF10-225	ENST00000551139	CANX	P27824	592 aa	Known RBP	13.54	□□□□□ -0.24
RNF10-225	ENST00000551139	MTHFSD	Q2M296	383 aa	Known RBP	13.54	□□□□□ -0.24
RNF10-225	ENST00000551139	RRAGC	Q9HB90	399 aa		13.54	□□□□□ -0.24
RNF10-225	ENST00000551139	NARF	Q9UHQ1	456 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms