RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
GNPTAB-208ENST00000550718 RAD21O60216 631 aa11.09□□□□□ -0.63
GNPTAB-208ENST00000550718 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
GNPTAB-208ENST00000550718 SVOPQ8N4V2 548 aa11.09□□□□□ -0.63
GNPTAB-208ENST00000550718 RHBDD1Q8TEB9 315 aa11.09□□□□□ -0.63
GNPTAB-208ENST00000550718 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
GNPTAB-208ENST00000550718 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
GNPTAB-208ENST00000550718 INHAP05111 366 aa11.08□□□□□ -0.64
GNPTAB-208ENST00000550718 SCNN1DP51172 638 aa11.08□□□□□ -0.64
GNPTAB-208ENST00000550718 NUCKS1Q9H1E3 243 aaKnown RBP11.08□□□□□ -0.64
GNPTAB-208ENST00000550718 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
GNPTAB-208ENST00000550718 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
GNPTAB-208ENST00000550718 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
GNPTAB-208ENST00000550718 TLR1Q15399 786 aa11.06□□□□□ -0.64
GNPTAB-208ENST00000550718 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
GNPTAB-208ENST00000550718 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
GNPTAB-208ENST00000550718 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
GNPTAB-208ENST00000550718 GDF10P55107 478 aa11.05□□□□□ -0.64
GNPTAB-208ENST00000550718 TMEM132AQ24JP5 1023 aa11.04□□□□□ -0.64
GNPTAB-208ENST00000550718 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
GNPTAB-208ENST00000550718 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
GNPTAB-208ENST00000550718 GPR25O00155 361 aa11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 EML3Q32P44 896 aa11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 C1orf216Q8TAB5 229 aa11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 PHF24Q9UPV7 400 aa11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 IGF1RP08069 1367 aa11.03□□□□□ -0.64
GNPTAB-208ENST00000550718 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 CELA2BP08218 269 aaPredicted RBP11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 PHKA2P46019 1235 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 GSK3AP49840 483 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 SMTNP53814 917 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 MAP3K10Q02779 954 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 LYPD4Q6UWN0 246 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 CRISPLD1Q9H336 500 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 ENAMQ9NRM1 1142 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 PCDHGA11Q9Y5H2 935 aa11.02□□□□□ -0.65
GNPTAB-208ENST00000550718 STAU1O95793 577 aaKnown RBP11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 THBS1P07996 1170 aa11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 MX2P20592 715 aa11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 MTFR1Q15390 333 aa11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 NOD1Q9Y239 953 aa11.01□□□□□ -0.65
GNPTAB-208ENST00000550718 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
GNPTAB-208ENST00000550718 SKIP12755 728 aa11□□□□□ -0.65
GNPTAB-208ENST00000550718 MSX1P28360 303 aa11□□□□□ -0.65
GNPTAB-208ENST00000550718 UBAP2LQ14157 1087 aaKnown RBP11□□□□□ -0.65
GNPTAB-208ENST00000550718 NIFKQ9BYG3 293 aaKnown RBP11□□□□□ -0.65
GNPTAB-208ENST00000550718 GPAMQ9HCL2 828 aa11□□□□□ -0.65
GNPTAB-208ENST00000550718 CDK2AP1O14519 115 aa10.99□□□□□ -0.65
GNPTAB-208ENST00000550718 EFHC2Q5JST6 749 aa10.99□□□□□ -0.65
GNPTAB-208ENST00000550718 MAP2K3P46734 347 aa10.98□□□□□ -0.65
GNPTAB-208ENST00000550718 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
GNPTAB-208ENST00000550718 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
GNPTAB-208ENST00000550718 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
GNPTAB-208ENST00000550718 A6NJY4 79 aa10.97□□□□□ -0.65
GNPTAB-208ENST00000550718 BACH1O14867 736 aa10.97□□□□□ -0.65
GNPTAB-208ENST00000550718 BCRP11274 1271 aa10.97□□□□□ -0.65
GNPTAB-208ENST00000550718 ATXN7L1Q9ULK2 861 aaPredicted RBP10.97□□□□□ -0.65
GNPTAB-208ENST00000550718 IQSEC3Q9UPP2 1182 aaPredicted RBP10.97□□□□□ -0.65
GNPTAB-208ENST00000550718 MARSP56192 900 aaKnown RBP10.96□□□□□ -0.65
GNPTAB-208ENST00000550718 RASSF7Q02833 373 aa10.96□□□□□ -0.65
GNPTAB-208ENST00000550718 NCOA4Q13772 614 aa10.96□□□□□ -0.65
GNPTAB-208ENST00000550718 PLEKHM2Q8IWE5 1019 aa10.96□□□□□ -0.65
GNPTAB-208ENST00000550718 ACDQ96AP0 544 aa10.96□□□□□ -0.65
GNPTAB-208ENST00000550718 RUBCNLQ9H714 662 aa10.96□□□□□ -0.65
GNPTAB-208ENST00000550718 USP17L5A8MUK1 530 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 GTF2IP78347 998 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 KANK3Q6NY19 840 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 NLRP8Q86W28 1048 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 TMEM151AQ8N4L1 468 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 NDFIP2Q9NV92 336 aa10.95□□□□□ -0.66
GNPTAB-208ENST00000550718 PLA2G4AP47712 749 aa10.94□□□□□ -0.66
GNPTAB-208ENST00000550718 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
GNPTAB-208ENST00000550718 ADAMTS19Q8TE59 1207 aa10.94□□□□□ -0.66
GNPTAB-208ENST00000550718 ZDHHC3Q9NYG2 299 aa10.94□□□□□ -0.66
GNPTAB-208ENST00000550718 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
GNPTAB-208ENST00000550718 ATP4AP20648 1035 aa10.93□□□□□ -0.66
GNPTAB-208ENST00000550718 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
GNPTAB-208ENST00000550718 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
GNPTAB-208ENST00000550718 GDF11O95390 407 aa10.92□□□□□ -0.66
GNPTAB-208ENST00000550718 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
GNPTAB-208ENST00000550718 SCHIP1Q9P0W5 487 aaPredicted RBP10.92□□□□□ -0.66
GNPTAB-208ENST00000550718 OIP5O43482 229 aa10.91□□□□□ -0.66
GNPTAB-208ENST00000550718 HDGFL1Q5TGJ6 251 aa10.91□□□□□ -0.66
GNPTAB-208ENST00000550718 DNAAF2Q9NVR5 837 aaKnown RBP10.91□□□□□ -0.66
GNPTAB-208ENST00000550718 GDF2Q9UK05 429 aaPredicted RBP10.91□□□□□ -0.66
GNPTAB-208ENST00000550718 ATP1A2P50993 1020 aa10.9□□□□□ -0.66
GNPTAB-208ENST00000550718 FNBP4Q8N3X1 1017 aaPredicted RBP10.9□□□□□ -0.66
GNPTAB-208ENST00000550718 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
GNPTAB-208ENST00000550718 PCDHGC4Q9Y5F7 938 aa10.9□□□□□ -0.66
GNPTAB-208ENST00000550718 ATP9BO43861 1147 aa10.89□□□□□ -0.67
GNPTAB-208ENST00000550718 BNIP3LO60238 219 aa10.89□□□□□ -0.67
GNPTAB-208ENST00000550718 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
GNPTAB-208ENST00000550718 EPHA4P54764 986 aa10.89□□□□□ -0.67
GNPTAB-208ENST00000550718 AIDAQ96BJ3 306 aa10.89□□□□□ -0.67
GNPTAB-208ENST00000550718 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms