RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 SCN11AQ9UI33 1791 aa22.06■■□□□ 1.12
TSFM-210ENST00000550559 MTHFSDQ2M296 383 aaKnown RBP22.05■■□□□ 1.12
TSFM-210ENST00000550559 ATP6V1AP38606 617 aa22.04■■□□□ 1.12
TSFM-210ENST00000550559 MSH5O43196 834 aa22.03■■□□□ 1.12
TSFM-210ENST00000550559 POLD1P28340 1107 aa22.03■■□□□ 1.12
TSFM-210ENST00000550559 ZNF831Q5JPB2 1677 aa22.03■■□□□ 1.12
TSFM-210ENST00000550559 MRC1P22897 1456 aa22.03■■□□□ 1.12
TSFM-210ENST00000550559 RNMTO43148 476 aaKnown RBP22.02■■□□□ 1.12
TSFM-210ENST00000550559 U2AF1L5P0DN76 240 aaPredicted RBP22.02■■□□□ 1.12
TSFM-210ENST00000550559 U2AF1Q01081 240 aaKnown RBP eCLIP22.02■■□□□ 1.12
TSFM-210ENST00000550559 NFATC2IPQ8NCF5 419 aa22.02■■□□□ 1.12
TSFM-210ENST00000550559 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
TSFM-210ENST00000550559 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
TSFM-210ENST00000550559 SLC52A2Q9HAB3 445 aa22.02■■□□□ 1.12
TSFM-210ENST00000550559 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
TSFM-210ENST00000550559 RALBP1Q15311 655 aa22.01■■□□□ 1.11
TSFM-210ENST00000550559 LINC00116Q8NCU8 138 aa22.01■■□□□ 1.11
TSFM-210ENST00000550559 MAP3K5Q99683 1374 aa22■■□□□ 1.11
TSFM-210ENST00000550559 PRKAR2BP31323 418 aa22■■□□□ 1.11
TSFM-210ENST00000550559 COL23A1Q86Y22 540 aaPredicted RBP22■■□□□ 1.11
TSFM-210ENST00000550559 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
TSFM-210ENST00000550559 ADAMTS7Q9UKP4 1686 aa21.99■■□□□ 1.11
TSFM-210ENST00000550559 SSFA2P28290 1259 aa21.99■■□□□ 1.11
TSFM-210ENST00000550559 ITPK1Q13572 414 aa21.99■■□□□ 1.11
TSFM-210ENST00000550559 ARXQ96QS3 562 aa21.99■■□□□ 1.11
TSFM-210ENST00000550559 GNAT3A8MTJ3 354 aa21.98■■□□□ 1.11
TSFM-210ENST00000550559 FCHSD2O94868 740 aa21.98■■□□□ 1.11
TSFM-210ENST00000550559 LGR6Q9HBX8 967 aa21.98■■□□□ 1.11
TSFM-210ENST00000550559 UBR3Q6ZT12 1888 aa21.98■■□□□ 1.11
TSFM-210ENST00000550559 VIRMAQ69YN4 1812 aaKnown RBP21.97■■□□□ 1.11
TSFM-210ENST00000550559 COL24A1Q17RW2 1714 aa21.97■■□□□ 1.11
TSFM-210ENST00000550559 DCAF8L1A6NGE4 600 aa21.96■■□□□ 1.11
TSFM-210ENST00000550559 GNPATO15228 680 aa21.96■■□□□ 1.11
TSFM-210ENST00000550559 PTCD1O75127 700 aaKnown RBP21.96■■□□□ 1.11
TSFM-210ENST00000550559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.95■■□□□ 1.1
TSFM-210ENST00000550559 PHF14O94880 888 aa21.95■■□□□ 1.1
TSFM-210ENST00000550559 NEFMP07197 916 aa21.95■■□□□ 1.1
TSFM-210ENST00000550559 TEFQ10587 303 aa21.95■■□□□ 1.1
TSFM-210ENST00000550559 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
TSFM-210ENST00000550559 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
TSFM-210ENST00000550559 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.1
TSFM-210ENST00000550559 FHDC1Q9C0D6 1143 aaPredicted RBP21.94■■□□□ 1.1
TSFM-210ENST00000550559 CICQ96RK0 1608 aaPredicted RBP21.94■■□□□ 1.1
TSFM-210ENST00000550559 COL5A3P25940 1745 aaPredicted RBP21.93■■□□□ 1.1
TSFM-210ENST00000550559 PHACTR3Q96KR7 559 aa21.93■■□□□ 1.1
TSFM-210ENST00000550559 RTCBQ9Y3I0 505 aaKnown RBP21.93■■□□□ 1.1
TSFM-210ENST00000550559 MYBBP1AQ9BQG0 1328 aaKnown RBP21.91■■□□□ 1.1
TSFM-210ENST00000550559 ADRA2BP18089 450 aa21.91■■□□□ 1.1
TSFM-210ENST00000550559 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
TSFM-210ENST00000550559 SYT17Q9BSW7 474 aa21.91■■□□□ 1.1
TSFM-210ENST00000550559 PNNQ9H307 717 aaKnown RBP21.91■■□□□ 1.1
TSFM-210ENST00000550559 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
TSFM-210ENST00000550559 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
TSFM-210ENST00000550559 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
TSFM-210ENST00000550559 CEMIPQ8WUJ3 1361 aa21.89■■□□□ 1.1
TSFM-210ENST00000550559 RPS6KA4O75676 772 aa21.89■■□□□ 1.09
TSFM-210ENST00000550559 SLC39A6Q13433 755 aa21.89■■□□□ 1.09
TSFM-210ENST00000550559 IL17REQ8NFR9 667 aa21.89■■□□□ 1.09
TSFM-210ENST00000550559 CRKLP46109 303 aaKnown RBP21.88■■□□□ 1.09
TSFM-210ENST00000550559 TRAPPC3LQ5T215 181 aa21.88■■□□□ 1.09
TSFM-210ENST00000550559 KLHL34Q8N239 644 aa21.88■■□□□ 1.09
TSFM-210ENST00000550559 KCPQ6ZWJ8 1503 aa21.88■■□□□ 1.09
TSFM-210ENST00000550559 TJP1Q07157 1748 aa21.88■■□□□ 1.09
TSFM-210ENST00000550559 VSIG10Q8N0Z9 540 aa21.87■■□□□ 1.09
TSFM-210ENST00000550559 HTATSF1O43719 755 aaKnown RBP21.86■■□□□ 1.09
TSFM-210ENST00000550559 MAPK8IP3Q9UPT6 1336 aa21.85■■□□□ 1.09
TSFM-210ENST00000550559 SIPA1L3O60292 1781 aaPredicted RBP21.85■■□□□ 1.09
TSFM-210ENST00000550559 UBR2Q8IWV8 1755 aa21.85■■□□□ 1.09
TSFM-210ENST00000550559 SMIM5Q71RC9 77 aa21.85■■□□□ 1.09
TSFM-210ENST00000550559 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
TSFM-210ENST00000550559 RFC4P35249 363 aa21.84■■□□□ 1.09
TSFM-210ENST00000550559 ZNF790Q6PG37 636 aa21.84■■□□□ 1.09
TSFM-210ENST00000550559 DNAJC10Q8IXB1 793 aa21.84■■□□□ 1.09
TSFM-210ENST00000550559 CCDC87Q9NVE4 849 aa21.83■■□□□ 1.09
TSFM-210ENST00000550559 ARHGEF1Q92888 912 aaKnown RBP21.82■■□□□ 1.08
TSFM-210ENST00000550559 BTBD11A6QL63 1104 aa21.81■■□□□ 1.08
TSFM-210ENST00000550559 NLGN1Q8N2Q7 840 aa21.81■■□□□ 1.08
TSFM-210ENST00000550559 FMNL2Q96PY5 1086 aa21.81■■□□□ 1.08
TSFM-210ENST00000550559 TEX13AQ9BXU3 409 aaPredicted RBP21.81■■□□□ 1.08
TSFM-210ENST00000550559 HEG1Q9ULI3 1381 aa21.8■■□□□ 1.08
TSFM-210ENST00000550559 STARD3NLO95772 234 aa21.8■■□□□ 1.08
TSFM-210ENST00000550559 CYP19A1P11511 503 aaPredicted RBP21.8■■□□□ 1.08
TSFM-210ENST00000550559 MCM10Q7L590 875 aa21.8■■□□□ 1.08
TSFM-210ENST00000550559 PLEKHF1Q96S99 279 aa21.8■■□□□ 1.08
TSFM-210ENST00000550559 PRKRIP1Q9H875 184 aaPredicted RBP21.8■■□□□ 1.08
TSFM-210ENST00000550559 NFE2L2Q16236 605 aa21.79■■□□□ 1.08
TSFM-210ENST00000550559 INTS5Q6P9B9 1019 aaKnown RBP21.79■■□□□ 1.08
TSFM-210ENST00000550559 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
TSFM-210ENST00000550559 CD2APQ9Y5K6 639 aa21.79■■□□□ 1.08
TSFM-210ENST00000550559 C4AP0C0L4 1744 aa21.79■■□□□ 1.08
TSFM-210ENST00000550559 WDR43Q15061 677 aaKnown RBP eCLIP21.78■■□□□ 1.08
TSFM-210ENST00000550559 MMP10P09238 476 aa21.77■■□□□ 1.08
TSFM-210ENST00000550559 SOS1Q07889 1333 aaPredicted RBP21.77■■□□□ 1.07
TSFM-210ENST00000550559 USP42Q9H9J4 1324 aaKnown RBP21.77■■□□□ 1.07
TSFM-210ENST00000550559 GYS1P13807 737 aa21.76■■□□□ 1.07
TSFM-210ENST00000550559 DCTN1Q14203 1278 aa21.76■■□□□ 1.07
TSFM-210ENST00000550559 ZBTB1Q9Y2K1 713 aa21.76■■□□□ 1.07
TSFM-210ENST00000550559 COL15A1P39059 1388 aa21.75■■□□□ 1.07
TSFM-210ENST00000550559 DLG5Q8TDM6 1919 aa21.75■■□□□ 1.07
TSFM-210ENST00000550559 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms