RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 KDRP35968 1356 aa14.93□□□□□ -0.02
PFDN5-210ENST00000550513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.92□□□□□ -0.02
PFDN5-210ENST00000550513 GRIN3BO60391 1043 aa14.92□□□□□ -0.02
PFDN5-210ENST00000550513 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
PFDN5-210ENST00000550513 SSFA2P28290 1259 aa14.92□□□□□ -0.02
PFDN5-210ENST00000550513 CD2APQ9Y5K6 639 aa14.92□□□□□ -0.02
PFDN5-210ENST00000550513 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
PFDN5-210ENST00000550513 KDM6AO15550 1401 aaPredicted RBP14.91□□□□□ -0.02
PFDN5-210ENST00000550513 ARFGEF1Q9Y6D6 1849 aa14.9□□□□□ -0.02
PFDN5-210ENST00000550513 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
PFDN5-210ENST00000550513 PANK3Q9H999 370 aa14.9□□□□□ -0.02
PFDN5-210ENST00000550513 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
PFDN5-210ENST00000550513 GNPATO15228 680 aa14.89□□□□□ -0.03
PFDN5-210ENST00000550513 GIGYF1O75420 1035 aaPredicted RBP14.89□□□□□ -0.03
PFDN5-210ENST00000550513 C1QTNF8P60827 252 aa14.89□□□□□ -0.03
PFDN5-210ENST00000550513 ITPK1Q13572 414 aa14.89□□□□□ -0.03
PFDN5-210ENST00000550513 SMIM5Q71RC9 77 aa14.89□□□□□ -0.03
PFDN5-210ENST00000550513 ATG3Q9NT62 314 aa14.88□□□□□ -0.03
PFDN5-210ENST00000550513 ATP10DQ9P241 1426 aa14.87□□□□□ -0.03
PFDN5-210ENST00000550513 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
PFDN5-210ENST00000550513 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
PFDN5-210ENST00000550513 ADAMTS7Q9UKP4 1686 aa14.87□□□□□ -0.03
PFDN5-210ENST00000550513 ERVV-2B6SEH9 535 aa14.86□□□□□ -0.03
PFDN5-210ENST00000550513 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
PFDN5-210ENST00000550513 ZNF530Q6P9A1 599 aaPredicted RBP14.86□□□□□ -0.03
PFDN5-210ENST00000550513 MORC1Q86VD1 984 aa14.86□□□□□ -0.03
PFDN5-210ENST00000550513 CCER1Q8TC90 406 aaPredicted RBP14.86□□□□□ -0.03
PFDN5-210ENST00000550513 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
PFDN5-210ENST00000550513 ADCY9O60503 1353 aa14.85□□□□□ -0.03
PFDN5-210ENST00000550513 PXDNLA1KZ92 1463 aa14.85□□□□□ -0.03
PFDN5-210ENST00000550513 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
PFDN5-210ENST00000550513 MRC1P22897 1456 aa14.84□□□□□ -0.03
PFDN5-210ENST00000550513 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
PFDN5-210ENST00000550513 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
PFDN5-210ENST00000550513 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
PFDN5-210ENST00000550513 RTCBQ9Y3I0 505 aaKnown RBP14.84□□□□□ -0.03
PFDN5-210ENST00000550513 C10orf71Q711Q0 1435 aa14.83□□□□□ -0.03
PFDN5-210ENST00000550513 SIPA1L3O60292 1781 aaPredicted RBP14.83□□□□□ -0.03
PFDN5-210ENST00000550513 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.03
PFDN5-210ENST00000550513 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.04
PFDN5-210ENST00000550513 WWC3Q9ULE0 1092 aa14.83□□□□□ -0.04
PFDN5-210ENST00000550513 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
PFDN5-210ENST00000550513 CNTNAP4Q9C0A0 1308 aa14.83□□□□□ -0.04
PFDN5-210ENST00000550513 MMP10P09238 476 aa14.82□□□□□ -0.04
PFDN5-210ENST00000550513 CABP4P57796 275 aa14.82□□□□□ -0.04
PFDN5-210ENST00000550513 SLC4A9Q96Q91 983 aa14.82□□□□□ -0.04
PFDN5-210ENST00000550513 ADRA2BP18089 450 aa14.81□□□□□ -0.04
PFDN5-210ENST00000550513 TRAPPC3LQ5T215 181 aa14.81□□□□□ -0.04
PFDN5-210ENST00000550513 SULT6B1Q6IMI4 303 aa14.81□□□□□ -0.04
PFDN5-210ENST00000550513 MTHFSP49914 203 aa14.8□□□□□ -0.04
PFDN5-210ENST00000550513 SBF1O95248 1867 aa14.79□□□□□ -0.04
PFDN5-210ENST00000550513 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
PFDN5-210ENST00000550513 RC3H1Q5TC82 1133 aaKnown RBP14.79□□□□□ -0.04
PFDN5-210ENST00000550513 GPBP1L1Q9HC44 474 aaPredicted RBP14.79□□□□□ -0.04
PFDN5-210ENST00000550513 NRXN2Q9P2S2 1712 aa14.78□□□□□ -0.04
PFDN5-210ENST00000550513 KCPQ6ZWJ8 1503 aa14.78□□□□□ -0.04
PFDN5-210ENST00000550513 IL13P35225 146 aa14.78□□□□□ -0.04
PFDN5-210ENST00000550513 RFC4P35249 363 aa14.78□□□□□ -0.04
PFDN5-210ENST00000550513 NLGN1Q8N2Q7 840 aa14.78□□□□□ -0.04
PFDN5-210ENST00000550513 SCN7AQ01118 1682 aa14.77□□□□□ -0.04
PFDN5-210ENST00000550513 PTCD1O75127 700 aaKnown RBP14.77□□□□□ -0.05
PFDN5-210ENST00000550513 RPS6KA4O75676 772 aa14.77□□□□□ -0.05
PFDN5-210ENST00000550513 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.05
PFDN5-210ENST00000550513 ZNF526Q8TF50 670 aaPredicted RBP14.77□□□□□ -0.05
PFDN5-210ENST00000550513 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.05
PFDN5-210ENST00000550513 CCDC88AQ3V6T2 1871 aa14.77□□□□□ -0.05
PFDN5-210ENST00000550513 CACNA1SQ13698 1873 aa14.76□□□□□ -0.05
PFDN5-210ENST00000550513 GYS1P13807 737 aa14.76□□□□□ -0.05
PFDN5-210ENST00000550513 NFATC2IPQ8NCF5 419 aa14.76□□□□□ -0.05
PFDN5-210ENST00000550513 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
PFDN5-210ENST00000550513 TNRC6CQ9HCJ0 1690 aaKnown RBP14.76□□□□□ -0.05
PFDN5-210ENST00000550513 COL3A1P02461 1466 aaPredicted RBP14.76□□□□□ -0.05
PFDN5-210ENST00000550513 TIAM2Q8IVF5 1701 aa14.75□□□□□ -0.05
PFDN5-210ENST00000550513 CRKLP46109 303 aaKnown RBP14.75□□□□□ -0.05
PFDN5-210ENST00000550513 TGFB2P61812 414 aa14.75□□□□□ -0.05
PFDN5-210ENST00000550513 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
PFDN5-210ENST00000550513 PARP3Q9Y6F1 533 aa14.75□□□□□ -0.05
PFDN5-210ENST00000550513 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
PFDN5-210ENST00000550513 USP42Q9H9J4 1324 aaKnown RBP14.74□□□□□ -0.05
PFDN5-210ENST00000550513 BCORQ6W2J9 1755 aa14.74□□□□□ -0.05
PFDN5-210ENST00000550513 SLC52A2Q9HAB3 445 aa14.73□□□□□ -0.05
PFDN5-210ENST00000550513 BCS1LQ9Y276 419 aa14.73□□□□□ -0.05
PFDN5-210ENST00000550513 ANKRD31Q8N7Z5 1873 aa14.72□□□□□ -0.05
PFDN5-210ENST00000550513 A0A0G2JLW4 131 aa14.72□□□□□ -0.05
PFDN5-210ENST00000550513 HMOX1P09601 288 aa14.72□□□□□ -0.05
PFDN5-210ENST00000550513 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
PFDN5-210ENST00000550513 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
PFDN5-210ENST00000550513 SRP68Q9UHB9 627 aaKnown RBP14.71□□□□□ -0.05
PFDN5-210ENST00000550513 COL11A2P13942 1736 aaPredicted RBP14.71□□□□□ -0.05
PFDN5-210ENST00000550513 COL15A1P39059 1388 aa14.71□□□□□ -0.06
PFDN5-210ENST00000550513 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
PFDN5-210ENST00000550513 DPEP1P16444 411 aa14.7□□□□□ -0.06
PFDN5-210ENST00000550513 ARFGEF2Q9Y6D5 1785 aa14.7□□□□□ -0.06
PFDN5-210ENST00000550513 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
PFDN5-210ENST00000550513 FCHSD2O94868 740 aa14.69□□□□□ -0.06
PFDN5-210ENST00000550513 FKBP8Q14318 412 aa14.69□□□□□ -0.06
PFDN5-210ENST00000550513 DNAJC10Q8IXB1 793 aa14.69□□□□□ -0.06
PFDN5-210ENST00000550513 LGR6Q9HBX8 967 aa14.69□□□□□ -0.06
PFDN5-210ENST00000550513 SOS1Q07889 1333 aaPredicted RBP14.68□□□□□ -0.06
PFDN5-210ENST00000550513 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms