RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 MMP10P09238 476 aa20.89■□□□□ 0.93
SVOP-203ENST00000550436 SLC4A9Q96Q91 983 aa20.89■□□□□ 0.93
SVOP-203ENST00000550436 POLKQ9UBT6 870 aa20.89■□□□□ 0.93
SVOP-203ENST00000550436 KIAA1551Q9HCM1 1747 aa20.89■□□□□ 0.93
SVOP-203ENST00000550436 KIF3CO14782 793 aa20.88■□□□□ 0.93
SVOP-203ENST00000550436 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
SVOP-203ENST00000550436 HMGB2P26583 209 aaKnown RBP20.87■□□□□ 0.93
SVOP-203ENST00000550436 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
SVOP-203ENST00000550436 IFNL2Q8IZJ0 200 aa20.87■□□□□ 0.93
SVOP-203ENST00000550436 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
SVOP-203ENST00000550436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.86■□□□□ 0.93
SVOP-203ENST00000550436 PXDNLA1KZ92 1463 aa20.86■□□□□ 0.93
SVOP-203ENST00000550436 A0A0G2JLW4 131 aa20.85■□□□□ 0.93
SVOP-203ENST00000550436 KIF13BQ9NQT8 1826 aa20.84■□□□□ 0.93
SVOP-203ENST00000550436 CICQ96RK0 1608 aaPredicted RBP20.84■□□□□ 0.93
SVOP-203ENST00000550436 KDRP35968 1356 aa20.84■□□□□ 0.93
SVOP-203ENST00000550436 POLR3GLQ9BT43 218 aa20.83■□□□□ 0.93
SVOP-203ENST00000550436 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
SVOP-203ENST00000550436 TIMELESSQ9UNS1 1208 aa20.83■□□□□ 0.93
SVOP-203ENST00000550436 MYH14Q7Z406 1995 aaKnown RBP20.83■□□□□ 0.92
SVOP-203ENST00000550436 BCS1LQ9Y276 419 aa20.82■□□□□ 0.92
SVOP-203ENST00000550436 TRAPPC3LQ5T215 181 aa20.81■□□□□ 0.92
SVOP-203ENST00000550436 ARHGEF1Q92888 912 aaKnown RBP20.81■□□□□ 0.92
SVOP-203ENST00000550436 DPEP1P16444 411 aa20.8■□□□□ 0.92
SVOP-203ENST00000550436 RTCBQ9Y3I0 505 aaKnown RBP20.8■□□□□ 0.92
SVOP-203ENST00000550436 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
SVOP-203ENST00000550436 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
SVOP-203ENST00000550436 GYS1P13807 737 aa20.78■□□□□ 0.92
SVOP-203ENST00000550436 ARHGAP27Q6ZUM4 889 aa20.78■□□□□ 0.92
SVOP-203ENST00000550436 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
SVOP-203ENST00000550436 NLGN1Q8N2Q7 840 aa20.77■□□□□ 0.92
SVOP-203ENST00000550436 NMRK2Q9NPI5 230 aa20.77■□□□□ 0.92
SVOP-203ENST00000550436 C4AP0C0L4 1744 aa20.77■□□□□ 0.92
SVOP-203ENST00000550436 BRCA1P38398 1863 aaKnown RBP20.76■□□□□ 0.91
SVOP-203ENST00000550436 TGFB2P61812 414 aa20.76■□□□□ 0.91
SVOP-203ENST00000550436 ERVV-2B6SEH9 535 aa20.75■□□□□ 0.91
SVOP-203ENST00000550436 RPS6KA4O75676 772 aa20.75■□□□□ 0.91
SVOP-203ENST00000550436 FCHSD2O94868 740 aa20.75■□□□□ 0.91
SVOP-203ENST00000550436 RC3H1Q5TC82 1133 aaKnown RBP20.75■□□□□ 0.91
SVOP-203ENST00000550436 AEBP1Q8IUX7 1158 aa20.75■□□□□ 0.91
SVOP-203ENST00000550436 SRP68Q9UHB9 627 aaKnown RBP20.75■□□□□ 0.91
SVOP-203ENST00000550436 KCNA3P22001 575 aa20.74■□□□□ 0.91
SVOP-203ENST00000550436 ZNF530Q6P9A1 599 aaPredicted RBP20.74■□□□□ 0.91
SVOP-203ENST00000550436 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
SVOP-203ENST00000550436 ZNF831Q5JPB2 1677 aa20.73■□□□□ 0.91
SVOP-203ENST00000550436 PTCD1O75127 700 aaKnown RBP20.73■□□□□ 0.91
SVOP-203ENST00000550436 RFC4P35249 363 aa20.73■□□□□ 0.91
SVOP-203ENST00000550436 CABP4P57796 275 aa20.73■□□□□ 0.91
SVOP-203ENST00000550436 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
SVOP-203ENST00000550436 CCDC87Q9NVE4 849 aa20.73■□□□□ 0.91
SVOP-203ENST00000550436 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
SVOP-203ENST00000550436 PARP3Q9Y6F1 533 aa20.72■□□□□ 0.91
SVOP-203ENST00000550436 ADRA2BP18089 450 aa20.71■□□□□ 0.91
SVOP-203ENST00000550436 DNAJC5GQ8N7S2 189 aa20.71■□□□□ 0.91
SVOP-203ENST00000550436 TOMM70O94826 608 aa20.7■□□□□ 0.9
SVOP-203ENST00000550436 HTRA3P83110 453 aa20.7■□□□□ 0.9
SVOP-203ENST00000550436 DDR1Q08345 913 aa20.7■□□□□ 0.9
SVOP-203ENST00000550436 FKBP8Q14318 412 aa20.7■□□□□ 0.9
SVOP-203ENST00000550436 C9orf131Q5VYM1 1079 aa20.7■□□□□ 0.9
SVOP-203ENST00000550436 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
SVOP-203ENST00000550436 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
SVOP-203ENST00000550436 CRKLP46109 303 aaKnown RBP20.69■□□□□ 0.9
SVOP-203ENST00000550436 MTHFSP49914 203 aa20.69■□□□□ 0.9
SVOP-203ENST00000550436 NFATC2IPQ8NCF5 419 aa20.69■□□□□ 0.9
SVOP-203ENST00000550436 PANK3Q9H999 370 aa20.69■□□□□ 0.9
SVOP-203ENST00000550436 TJP1Q07157 1748 aa20.68■□□□□ 0.9
SVOP-203ENST00000550436 CHRNA5P30532 468 aa20.68■□□□□ 0.9
SVOP-203ENST00000550436 APLP1P51693 650 aa20.68■□□□□ 0.9
SVOP-203ENST00000550436 USP42Q9H9J4 1324 aaKnown RBP20.65■□□□□ 0.9
SVOP-203ENST00000550436 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
SVOP-203ENST00000550436 INTS5Q6P9B9 1019 aaKnown RBP20.65■□□□□ 0.9
SVOP-203ENST00000550436 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
SVOP-203ENST00000550436 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
SVOP-203ENST00000550436 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.9
SVOP-203ENST00000550436 PLEKHG2Q9H7P9 1386 aa20.64■□□□□ 0.89
SVOP-203ENST00000550436 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
SVOP-203ENST00000550436 SBF1O95248 1867 aa20.64■□□□□ 0.89
SVOP-203ENST00000550436 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
SVOP-203ENST00000550436 C1orf141Q5JVX7 400 aa20.63■□□□□ 0.89
SVOP-203ENST00000550436 DNAJC10Q8IXB1 793 aa20.63■□□□□ 0.89
SVOP-203ENST00000550436 SCN11AQ9UI33 1791 aa20.63■□□□□ 0.89
SVOP-203ENST00000550436 WDR90Q96KV7 1748 aa20.63■□□□□ 0.89
SVOP-203ENST00000550436 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
SVOP-203ENST00000550436 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
SVOP-203ENST00000550436 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
SVOP-203ENST00000550436 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
SVOP-203ENST00000550436 TM4SF1P30408 202 aa20.61■□□□□ 0.89
SVOP-203ENST00000550436 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
SVOP-203ENST00000550436 LGR6Q9HBX8 967 aa20.61■□□□□ 0.89
SVOP-203ENST00000550436 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
SVOP-203ENST00000550436 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
SVOP-203ENST00000550436 IL13P35225 146 aa20.59■□□□□ 0.89
SVOP-203ENST00000550436 SLC39A6Q13433 755 aa20.59■□□□□ 0.89
SVOP-203ENST00000550436 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
SVOP-203ENST00000550436 RASSF7Q02833 373 aa20.58■□□□□ 0.89
SVOP-203ENST00000550436 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
SVOP-203ENST00000550436 PRELPP51888 382 aa20.57■□□□□ 0.88
SVOP-203ENST00000550436 C16orf71Q8IYS4 520 aaPredicted RBP20.57■□□□□ 0.88
SVOP-203ENST00000550436 SOS1Q07889 1333 aaPredicted RBP20.56■□□□□ 0.88
SVOP-203ENST00000550436 EIF4G2P78344 907 aaKnown RBP eCLIP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms