RNA–Protein interactions for RNA: ENST00000550257.5

PFKM-218, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-218ENST00000550257 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
PFKM-218ENST00000550257 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
PFKM-218ENST00000550257 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
PFKM-218ENST00000550257 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
PFKM-218ENST00000550257 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
PFKM-218ENST00000550257 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
PFKM-218ENST00000550257 KDM3BQ7LBC6 1761 aa17.09■□□□□ 0.33
PFKM-218ENST00000550257 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
PFKM-218ENST00000550257 SLC52A2Q9HAB3 445 aa17.08■□□□□ 0.32
PFKM-218ENST00000550257 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
PFKM-218ENST00000550257 ABCC4O15439 1325 aa17.07■□□□□ 0.32
PFKM-218ENST00000550257 CYP27B1O15528 508 aa17.07■□□□□ 0.32
PFKM-218ENST00000550257 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
PFKM-218ENST00000550257 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
PFKM-218ENST00000550257 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
PFKM-218ENST00000550257 MRC1P22897 1456 aa17.06■□□□□ 0.32
PFKM-218ENST00000550257 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
PFKM-218ENST00000550257 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
PFKM-218ENST00000550257 JCADQ9P266 1359 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 ERVV-2B6SEH9 535 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 TNNQ9UQP3 1299 aa17.05■□□□□ 0.32
PFKM-218ENST00000550257 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
PFKM-218ENST00000550257 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
PFKM-218ENST00000550257 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
PFKM-218ENST00000550257 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
PFKM-218ENST00000550257 CACNA1FO60840 1977 aa17.03■□□□□ 0.32
PFKM-218ENST00000550257 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
PFKM-218ENST00000550257 CABP4P57796 275 aa17.02■□□□□ 0.32
PFKM-218ENST00000550257 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
PFKM-218ENST00000550257 ZBTB40Q9NUA8 1239 aa17.02■□□□□ 0.32
PFKM-218ENST00000550257 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
PFKM-218ENST00000550257 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
PFKM-218ENST00000550257 PLCH1Q4KWH8 1693 aa17.01■□□□□ 0.31
PFKM-218ENST00000550257 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
PFKM-218ENST00000550257 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
PFKM-218ENST00000550257 NFATC2IPQ8NCF5 419 aa17.01■□□□□ 0.31
PFKM-218ENST00000550257 DISP2A7MBM2 1401 aa17.01■□□□□ 0.31
PFKM-218ENST00000550257 ZBTB7BO15156 539 aaPredicted RBP17■□□□□ 0.31
PFKM-218ENST00000550257 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
PFKM-218ENST00000550257 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
PFKM-218ENST00000550257 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
PFKM-218ENST00000550257 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
PFKM-218ENST00000550257 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
PFKM-218ENST00000550257 SLIT2O94813 1529 aa16.99■□□□□ 0.31
PFKM-218ENST00000550257 RGS12O14924 1447 aa16.98■□□□□ 0.31
PFKM-218ENST00000550257 KCNQ3O43525 872 aa16.98■□□□□ 0.31
PFKM-218ENST00000550257 FLIIQ13045 1269 aa16.98■□□□□ 0.31
PFKM-218ENST00000550257 PCDHB15Q9Y5E8 787 aa16.98■□□□□ 0.31
PFKM-218ENST00000550257 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
PFKM-218ENST00000550257 NUTM2BA6NNL0 878 aaPredicted RBP16.97■□□□□ 0.31
PFKM-218ENST00000550257 NUTM2EB1AL46 878 aaPredicted RBP16.97■□□□□ 0.31
PFKM-218ENST00000550257 EXOC5O00471 708 aa16.97■□□□□ 0.31
PFKM-218ENST00000550257 NUTM2AQ8IVF1 878 aaPredicted RBP16.97■□□□□ 0.31
PFKM-218ENST00000550257 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
PFKM-218ENST00000550257 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
PFKM-218ENST00000550257 SNRPA1P09661 255 aaKnown RBP16.96■□□□□ 0.31
PFKM-218ENST00000550257 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
PFKM-218ENST00000550257 DDX54Q8TDD1 881 aaKnown RBP16.96■□□□□ 0.31
PFKM-218ENST00000550257 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
PFKM-218ENST00000550257 PXDNLA1KZ92 1463 aa16.96■□□□□ 0.31
PFKM-218ENST00000550257 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.3
PFKM-218ENST00000550257 IGHDP01880 384 aa16.95■□□□□ 0.3
PFKM-218ENST00000550257 G2E3Q7L622 706 aa16.95■□□□□ 0.3
PFKM-218ENST00000550257 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
PFKM-218ENST00000550257 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
PFKM-218ENST00000550257 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
PFKM-218ENST00000550257 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
PFKM-218ENST00000550257 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
PFKM-218ENST00000550257 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
PFKM-218ENST00000550257 LRP6O75581 1613 aa16.94■□□□□ 0.3
PFKM-218ENST00000550257 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
PFKM-218ENST00000550257 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
PFKM-218ENST00000550257 ERBB4Q15303 1308 aa16.93■□□□□ 0.3
PFKM-218ENST00000550257 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
PFKM-218ENST00000550257 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
PFKM-218ENST00000550257 ZNF496Q96IT1 587 aaPredicted RBP16.92■□□□□ 0.3
PFKM-218ENST00000550257 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
PFKM-218ENST00000550257 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
PFKM-218ENST00000550257 VPS72Q15906 364 aa16.91■□□□□ 0.3
PFKM-218ENST00000550257 RPAP2Q8IXW5 612 aaPredicted RBP16.91■□□□□ 0.3
PFKM-218ENST00000550257 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
PFKM-218ENST00000550257 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
PFKM-218ENST00000550257 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
PFKM-218ENST00000550257 DDX58O95786 925 aaKnown RBP16.9■□□□□ 0.3
PFKM-218ENST00000550257 GNAI3P08754 354 aa16.9■□□□□ 0.3
PFKM-218ENST00000550257 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
PFKM-218ENST00000550257 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.3
PFKM-218ENST00000550257 DDB1Q16531 1140 aa16.89■□□□□ 0.29
PFKM-218ENST00000550257 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
PFKM-218ENST00000550257 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
PFKM-218ENST00000550257 GCC1Q96CN9 775 aa16.89■□□□□ 0.29
PFKM-218ENST00000550257 PAPPAQ13219 1627 aa16.88■□□□□ 0.29
PFKM-218ENST00000550257 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
PFKM-218ENST00000550257 N4BP2Q86UW6 1770 aaPredicted RBP16.88■□□□□ 0.29
PFKM-218ENST00000550257 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
PFKM-218ENST00000550257 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms