RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ITPK1Q13572 414 aa18.25■□□□□ 0.51
NUP188-211ENST00000550219 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
NUP188-211ENST00000550219 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
NUP188-211ENST00000550219 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
NUP188-211ENST00000550219 KDRP35968 1356 aa18.23■□□□□ 0.51
NUP188-211ENST00000550219 HSP90AB1P08238 724 aaKnown RBP18.23■□□□□ 0.51
NUP188-211ENST00000550219 SSFA2P28290 1259 aa18.23■□□□□ 0.51
NUP188-211ENST00000550219 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
NUP188-211ENST00000550219 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
NUP188-211ENST00000550219 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
NUP188-211ENST00000550219 SULT6B1Q6IMI4 303 aa18.22■□□□□ 0.51
NUP188-211ENST00000550219 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
NUP188-211ENST00000550219 CABP4P57796 275 aa18.21■□□□□ 0.51
NUP188-211ENST00000550219 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
NUP188-211ENST00000550219 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
NUP188-211ENST00000550219 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
NUP188-211ENST00000550219 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
NUP188-211ENST00000550219 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
NUP188-211ENST00000550219 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
NUP188-211ENST00000550219 MTHFSP49914 203 aa18.18■□□□□ 0.5
NUP188-211ENST00000550219 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
NUP188-211ENST00000550219 IL13P35225 146 aa18.17■□□□□ 0.5
NUP188-211ENST00000550219 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
NUP188-211ENST00000550219 SLC4A9Q96Q91 983 aa18.17■□□□□ 0.5
NUP188-211ENST00000550219 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
NUP188-211ENST00000550219 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
NUP188-211ENST00000550219 RTCBQ9Y3I0 505 aaKnown RBP18.16■□□□□ 0.5
NUP188-211ENST00000550219 UTRNP46939 3433 aa18.16■□□□□ 0.5
NUP188-211ENST00000550219 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
NUP188-211ENST00000550219 HMOX1P09601 288 aa18.15■□□□□ 0.5
NUP188-211ENST00000550219 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
NUP188-211ENST00000550219 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.49
NUP188-211ENST00000550219 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
NUP188-211ENST00000550219 TJP1Q07157 1748 aa18.13■□□□□ 0.49
NUP188-211ENST00000550219 MMP10P09238 476 aa18.13■□□□□ 0.49
NUP188-211ENST00000550219 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
NUP188-211ENST00000550219 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
NUP188-211ENST00000550219 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
NUP188-211ENST00000550219 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
NUP188-211ENST00000550219 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
NUP188-211ENST00000550219 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
NUP188-211ENST00000550219 MRC1P22897 1456 aa18.09■□□□□ 0.49
NUP188-211ENST00000550219 ATP10DQ9P241 1426 aa18.09■□□□□ 0.49
NUP188-211ENST00000550219 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
NUP188-211ENST00000550219 DIAPH1O60610 1272 aaKnown RBP18.09■□□□□ 0.49
NUP188-211ENST00000550219 ADRA2BP18089 450 aa18.09■□□□□ 0.49
NUP188-211ENST00000550219 RFC4P35249 363 aa18.09■□□□□ 0.49
NUP188-211ENST00000550219 RC3H1Q5TC82 1133 aaKnown RBP18.09■□□□□ 0.49
NUP188-211ENST00000550219 PXDNLA1KZ92 1463 aa18.08■□□□□ 0.49
NUP188-211ENST00000550219 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
NUP188-211ENST00000550219 RPS6KA4O75676 772 aa18.08■□□□□ 0.48
NUP188-211ENST00000550219 CRKLP46109 303 aaKnown RBP18.08■□□□□ 0.48
NUP188-211ENST00000550219 C1QTNF8P60827 252 aa18.08■□□□□ 0.48
NUP188-211ENST00000550219 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
NUP188-211ENST00000550219 C10orf71Q711Q0 1435 aa18.07■□□□□ 0.48
NUP188-211ENST00000550219 GYS1P13807 737 aa18.07■□□□□ 0.48
NUP188-211ENST00000550219 SLC52A2Q9HAB3 445 aa18.07■□□□□ 0.48
NUP188-211ENST00000550219 LGR6Q9HBX8 967 aa18.07■□□□□ 0.48
NUP188-211ENST00000550219 MYH14Q7Z406 1995 aaKnown RBP18.07■□□□□ 0.48
NUP188-211ENST00000550219 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
NUP188-211ENST00000550219 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
NUP188-211ENST00000550219 U2SURPO15042 1029 aaKnown RBP18.06■□□□□ 0.48
NUP188-211ENST00000550219 RNMTO43148 476 aaKnown RBP18.06■□□□□ 0.48
NUP188-211ENST00000550219 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
NUP188-211ENST00000550219 N4BP2Q86UW6 1770 aaPredicted RBP18.06■□□□□ 0.48
NUP188-211ENST00000550219 GOLGB1Q14789 3259 aaKnown RBP18.06■□□□□ 0.48
NUP188-211ENST00000550219 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
NUP188-211ENST00000550219 DDX10Q13206 875 aaKnown RBP18.05■□□□□ 0.48
NUP188-211ENST00000550219 MTHFSDQ2M296 383 aaKnown RBP18.05■□□□□ 0.48
NUP188-211ENST00000550219 ZNF526Q8TF50 670 aaPredicted RBP18.05■□□□□ 0.48
NUP188-211ENST00000550219 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
NUP188-211ENST00000550219 SRP68Q9UHB9 627 aaKnown RBP18.05■□□□□ 0.48
NUP188-211ENST00000550219 PARP3Q9Y6F1 533 aa18.05■□□□□ 0.48
NUP188-211ENST00000550219 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
NUP188-211ENST00000550219 SLC39A6Q13433 755 aa18.04■□□□□ 0.48
NUP188-211ENST00000550219 DNAJC10Q8IXB1 793 aa18.04■□□□□ 0.48
NUP188-211ENST00000550219 ADAMTS7Q9UKP4 1686 aa18.03■□□□□ 0.48
NUP188-211ENST00000550219 ADCY9O60503 1353 aa18.03■□□□□ 0.48
NUP188-211ENST00000550219 NPC1L1Q9UHC9 1359 aa18.03■□□□□ 0.48
NUP188-211ENST00000550219 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
NUP188-211ENST00000550219 A0A0G2JLW4 131 aa18.02■□□□□ 0.48
NUP188-211ENST00000550219 BCS1LQ9Y276 419 aa18.02■□□□□ 0.48
NUP188-211ENST00000550219 TGFB2P61812 414 aa18■□□□□ 0.47
NUP188-211ENST00000550219 FKBP8Q14318 412 aa18■□□□□ 0.47
NUP188-211ENST00000550219 INTS5Q6P9B9 1019 aaKnown RBP18■□□□□ 0.47
NUP188-211ENST00000550219 GPBP1L1Q9HC44 474 aaPredicted RBP18■□□□□ 0.47
NUP188-211ENST00000550219 DPEP1P16444 411 aa17.99■□□□□ 0.47
NUP188-211ENST00000550219 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
NUP188-211ENST00000550219 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
NUP188-211ENST00000550219 DDR1Q08345 913 aa17.98■□□□□ 0.47
NUP188-211ENST00000550219 COL15A1P39059 1388 aa17.98■□□□□ 0.47
NUP188-211ENST00000550219 ZPR1O75312 459 aa17.97■□□□□ 0.47
NUP188-211ENST00000550219 FCHSD2O94868 740 aa17.97■□□□□ 0.47
NUP188-211ENST00000550219 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
NUP188-211ENST00000550219 USPL1Q5W0Q7 1092 aa17.97■□□□□ 0.47
NUP188-211ENST00000550219 TTC5Q8N0Z6 440 aa17.97■□□□□ 0.47
NUP188-211ENST00000550219 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
NUP188-211ENST00000550219 TEFQ10587 303 aa17.96■□□□□ 0.47
NUP188-211ENST00000550219 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
NUP188-211ENST00000550219 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms